RNA–Protein interactions for RNA: ENST00000425208.6

HMGA2-205, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-205ENST00000425208 SNURFQ9Y675 71 aa10.32□□□□□ -0.76
HMGA2-205ENST00000425208 DMAC1Q96GE9 116 aa10.3□□□□□ -0.76
HMGA2-205ENST00000425208 C20orf197Q8N268 126 aa10.29□□□□□ -0.76
HMGA2-205ENST00000425208 FSIP2Q5CZC0 6907 aa10.28□□□□□ -0.76
HMGA2-205ENST00000425208 NDUFC1O43677 76 aa10.27□□□□□ -0.77
HMGA2-205ENST00000425208 KRTAP9-3Q9BYQ3 159 aa10.24□□□□□ -0.77
HMGA2-205ENST00000425208 CRCT1Q9UGL9 99 aa10.23□□□□□ -0.77
HMGA2-205ENST00000425208 COX7CP15954 63 aa10.19□□□□□ -0.78
HMGA2-205ENST00000425208 ACYP2P14621 99 aa10.15□□□□□ -0.79
HMGA2-205ENST00000425208 SPANXA2-OT1Q8N9U9 137 aa10.12□□□□□ -0.79
HMGA2-205ENST00000425208 LCE2BO14633 110 aa10.08□□□□□ -0.8
HMGA2-205ENST00000425208 ANAPC13Q9BS18 74 aa10.08□□□□□ -0.8
HMGA2-205ENST00000425208 H0YAA0 97 aa10.06□□□□□ -0.8
HMGA2-205ENST00000425208 USH2AO75445 5202 aa10.01□□□□□ -0.81
HMGA2-205ENST00000425208 CHKB-CPT1BH3BT56 60 aa9.98□□□□□ -0.81
HMGA2-205ENST00000425208 ADM2Q7Z4H4 148 aa9.95□□□□□ -0.82
HMGA2-205ENST00000425208 SPTSSBQ8NFR3 76 aa9.95□□□□□ -0.82
HMGA2-205ENST00000425208 H7BZZ5 65 aa9.93□□□□□ -0.82
HMGA2-205ENST00000425208 CYSTM1Q9H1C7 97 aa9.93□□□□□ -0.82
HMGA2-205ENST00000425208 KRTAP19-1Q8IUB9 90 aa9.92□□□□□ -0.82
HMGA2-205ENST00000425208 CRIPTQ9P021 101 aa9.92□□□□□ -0.82
HMGA2-205ENST00000425208 SPRR2GQ9BYE4 73 aa9.89□□□□□ -0.83
HMGA2-205ENST00000425208 SSPOA2VEC9 5147 aa9.84□□□□□ -0.83
HMGA2-205ENST00000425208 CCDC179H3BU77 68 aa9.84□□□□□ -0.83
HMGA2-205ENST00000425208 COA5Q86WW8 74 aa9.81□□□□□ -0.84
HMGA2-205ENST00000425208 P0C880 135 aa9.77□□□□□ -0.85
HMGA2-205ENST00000425208 KRTAP3-2Q9BYR7 98 aa9.74□□□□□ -0.85
HMGA2-205ENST00000425208 KRTAP19-8Q3LI54 63 aa9.73□□□□□ -0.85
HMGA2-205ENST00000425208 Q5VV11 94 aa9.73□□□□□ -0.85
HMGA2-205ENST00000425208 R4GN34 69 aa9.7□□□□□ -0.86
HMGA2-205ENST00000425208 KRTAP19-6Q3LI70 58 aa9.67□□□□□ -0.86
HMGA2-205ENST00000425208 MT1BP07438 61 aa9.66□□□□□ -0.86
HMGA2-205ENST00000425208 M0QZ58 72 aa9.63□□□□□ -0.87
HMGA2-205ENST00000425208 ATP5EP56381 51 aaPredicted RBP9.63□□□□□ -0.87
HMGA2-205ENST00000425208 FCGBPQ9Y6R7 5405 aaPredicted RBP9.55□□□□□ -0.88
HMGA2-205ENST00000425208 TMEM258P61165 79 aa9.54□□□□□ -0.88
HMGA2-205ENST00000425208 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.53□□□□□ -0.88
HMGA2-205ENST00000425208 SEC61GP60059 68 aa9.49□□□□□ -0.89
HMGA2-205ENST00000425208 LINC01554Q52M75 96 aa9.47□□□□□ -0.89
HMGA2-205ENST00000425208 SERP1Q9Y6X1 66 aa9.46□□□□□ -0.9
HMGA2-205ENST00000425208 A6NN06 94 aa9.43□□□□□ -0.9
HMGA2-205ENST00000425208 PLAC4Q8WY50 150 aa9.41□□□□□ -0.9
HMGA2-205ENST00000425208 KRTAP9-7A8MTY7 169 aa9.4□□□□□ -0.9
HMGA2-205ENST00000425208 KRTAP10-5P60370 271 aa9.37□□□□□ -0.91
HMGA2-205ENST00000425208 A0A1B0GU69 56 aa9.31□□□□□ -0.92
HMGA2-205ENST00000425208 KRTAP13-4Q3LI77 160 aa9.31□□□□□ -0.92
HMGA2-205ENST00000425208 MACF1Q9UPN3 7388 aaKnown RBP9.29□□□□□ -0.92
HMGA2-205ENST00000425208 A0A1B0GU33 70 aa9.26□□□□□ -0.93
HMGA2-205ENST00000425208 PRO2289Q9P1D8 64 aa9.24□□□□□ -0.93
HMGA2-205ENST00000425208 PCP4P48539 62 aa9.2□□□□□ -0.94
HMGA2-205ENST00000425208 MT1XP80297 61 aa9.19□□□□□ -0.94
HMGA2-205ENST00000425208 PRR15LQ9BU68 103 aa9.19□□□□□ -0.94
HMGA2-205ENST00000425208 SPATA8Q6RVD6 105 aa9.16□□□□□ -0.94
HMGA2-205ENST00000425208 LINC01558Q9Y6Z2 57 aa9.16□□□□□ -0.94
HMGA2-205ENST00000425208 SYNE2Q8WXH0 6885 aaKnown RBP9.1□□□□□ -0.95
HMGA2-205ENST00000425208 A0A0D9SG42 100 aa9.1□□□□□ -0.95
HMGA2-205ENST00000425208 SVIPQ8NHG7 77 aa9.06□□□□□ -0.96
HMGA2-205ENST00000425208 SMIM26A0A096LP01 95 aa9.01□□□□□ -0.97
HMGA2-205ENST00000425208 CAMK2N1Q7Z7J9 78 aa8.98□□□□□ -0.97
HMGA2-205ENST00000425208 SPINT4Q6UDR6 99 aa8.95□□□□□ -0.98
HMGA2-205ENST00000425208 V9GYY9 64 aa8.94□□□□□ -0.98
HMGA2-205ENST00000425208 KRTAP12-1P59990 96 aa8.91□□□□□ -0.98
HMGA2-205ENST00000425208 A8MU10 97 aa8.9□□□□□ -0.98
HMGA2-205ENST00000425208 KRTAP12-2P59991 146 aa8.88□□□□□ -0.99
HMGA2-205ENST00000425208 KRTAP6-3Q3LI67 103 aa8.88□□□□□ -0.99
HMGA2-205ENST00000425208 UQCR11O14957 56 aa8.88□□□□□ -0.99
HMGA2-205ENST00000425208 Q1T7F1 81 aa8.88□□□□□ -0.99
HMGA2-205ENST00000425208 RPS28P62857 69 aaKnown RBP8.81□□□□□ -1
HMGA2-205ENST00000425208 PSPHP1O15172 72 aa8.8□□□□□ -1
HMGA2-205ENST00000425208 KMT2DO14686 5537 aa8.79□□□□□ -1
HMGA2-205ENST00000425208 KRTAP10-7P60409 375 aaPredicted RBP8.78□□□□□ -1
HMGA2-205ENST00000425208 KRTAP10-12P60413 245 aa8.73□□□□□ -1.01
HMGA2-205ENST00000425208 MIR22HGQ0VDD5 57 aa8.71□□□□□ -1.02
HMGA2-205ENST00000425208 KRTAP5-9P26371 169 aa8.68□□□□□ -1.02
HMGA2-205ENST00000425208 KRTAP8-1Q8IUC2 63 aa8.66□□□□□ -1.02
HMGA2-205ENST00000425208 KRTAP4-8A0A0G2JLE6 195 aa8.63□□□□□ -1.03
HMGA2-205ENST00000425208 KRTAP4-8Q9BYQ9 185 aa8.63□□□□□ -1.03
HMGA2-205ENST00000425208 MUC12Q9UKN1 5478 aa8.58□□□□□ -1.04
HMGA2-205ENST00000425208 NEBP20929 6669 aa8.57□□□□□ -1.04
HMGA2-205ENST00000425208 A6NED7 52 aa8.54□□□□□ -1.04
HMGA2-205ENST00000425208 SPRR2FQ96RM1 72 aa8.54□□□□□ -1.04
HMGA2-205ENST00000425208 K7ERS5 55 aa8.49□□□□□ -1.05
HMGA2-205ENST00000425208 C10orf95Q9H7T3 257 aa8.47□□□□□ -1.05
HMGA2-205ENST00000425208 TNP1P09430 55 aa8.4□□□□□ -1.06
HMGA2-205ENST00000425208 MDN1Q9NU22 5596 aa8.38□□□□□ -1.07
HMGA2-205ENST00000425208 SPRR2EP22531 72 aa8.31□□□□□ -1.08
HMGA2-205ENST00000425208 SPRR2BP35325 72 aa8.31□□□□□ -1.08
HMGA2-205ENST00000425208 SPRR2AP35326 72 aa8.31□□□□□ -1.08
HMGA2-205ENST00000425208 KRTAP20-1Q3LI63 56 aa8.24□□□□□ -1.09
HMGA2-205ENST00000425208 LCE1AQ5T7P2 110 aa8.24□□□□□ -1.09
HMGA2-205ENST00000425208 CDC42SE1Q9NRR8 79 aa8.24□□□□□ -1.09
HMGA2-205ENST00000425208 KRTAP19-7Q3SYF9 63 aa8.2□□□□□ -1.1
HMGA2-205ENST00000425208 LCE3AQ5TA76 89 aa8.17□□□□□ -1.1
HMGA2-205ENST00000425208 KRTAP25-1Q3LHN0 102 aa8.14□□□□□ -1.11
HMGA2-205ENST00000425208 KRTAP19-5Q3LI72 72 aa8.12□□□□□ -1.11
HMGA2-205ENST00000425208 MT1EP04732 61 aa8.12□□□□□ -1.11
HMGA2-205ENST00000425208 SPRR2DP22532 72 aa8.03□□□□□ -1.12
HMGA2-205ENST00000425208 KRTAP2-3P0C7H8 128 aa8.01□□□□□ -1.13
HMGA2-205ENST00000425208 KRTAP2-4Q9BYR9 128 aa8.01□□□□□ -1.13
HMGA2-205ENST00000425208 ROMO1P60602 79 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms