RNA–Protein interactions for RNA: ENST00000423275.5

RAF1-203, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene RAF1, Length 2,354 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-203ENST00000423275 DMBT1Q9UGM3 2413 aaPredicted RBP9.84□□□□□ -0.83
RAF1-203ENST00000423275 MYCBP2O75592 4640 aa9.81□□□□□ -0.84
RAF1-203ENST00000423275 HERC2O95714 4834 aa9.8□□□□□ -0.84
RAF1-203ENST00000423275 KIAA1109Q2LD37 5005 aa9.8□□□□□ -0.84
RAF1-203ENST00000423275 COX6B2Q6YFQ2 88 aa9.8□□□□□ -0.84
RAF1-203ENST00000423275 H0YAA0 97 aa9.79□□□□□ -0.84
RAF1-203ENST00000423275 A0A1B0GU33 70 aa9.73□□□□□ -0.85
RAF1-203ENST00000423275 XP32Q5T750 250 aa9.71□□□□□ -0.86
RAF1-203ENST00000423275 RPL37P61927 97 aaKnown RBP9.7□□□□□ -0.86
RAF1-203ENST00000423275 H1FX-AS1Q4G0G2 97 aa9.69□□□□□ -0.86
RAF1-203ENST00000423275 MT1HL1P0DM35 61 aa9.68□□□□□ -0.86
RAF1-203ENST00000423275 KRTAP3-3Q9BYR6 98 aa9.58□□□□□ -0.88
RAF1-203ENST00000423275 CSAG1Q6PB30 78 aa9.55□□□□□ -0.88
RAF1-203ENST00000423275 LPAP08519 4548 aa9.53□□□□□ -0.88
RAF1-203ENST00000423275 LRP2P98164 4655 aa9.48□□□□□ -0.89
RAF1-203ENST00000423275 KRTAP10-6P60371 365 aaPredicted RBP9.48□□□□□ -0.89
RAF1-203ENST00000423275 KRTAP4-5Q9BYR2 181 aa9.47□□□□□ -0.89
RAF1-203ENST00000423275 S4R3F8 94 aa9.46□□□□□ -0.89
RAF1-203ENST00000423275 LINC01554Q52M75 96 aa9.45□□□□□ -0.9
RAF1-203ENST00000423275 KRTAP3-2Q9BYR7 98 aa9.42□□□□□ -0.9
RAF1-203ENST00000423275 ABCA13Q86UQ4 5058 aa9.42□□□□□ -0.9
RAF1-203ENST00000423275 KRTAP13-4Q3LI77 160 aa9.41□□□□□ -0.9
RAF1-203ENST00000423275 PCLOQ9Y6V0 5065 aa9.37□□□□□ -0.91
RAF1-203ENST00000423275 TPRXLQ17RH7 258 aa9.36□□□□□ -0.91
RAF1-203ENST00000423275 K7ERS5 55 aa9.35□□□□□ -0.91
RAF1-203ENST00000423275 P0C880 135 aa9.32□□□□□ -0.92
RAF1-203ENST00000423275 A0A0D9SG42 100 aa9.32□□□□□ -0.92
RAF1-203ENST00000423275 KRTAP25-1Q3LHN0 102 aa9.27□□□□□ -0.93
RAF1-203ENST00000423275 CRIPTQ9P021 101 aa9.24□□□□□ -0.93
RAF1-203ENST00000423275 ROMO1P60602 79 aa9.17□□□□□ -0.94
RAF1-203ENST00000423275 J3QL48 77 aa9.08□□□□□ -0.96
RAF1-203ENST00000423275 KRTAP12-2P59991 146 aa9.08□□□□□ -0.96
RAF1-203ENST00000423275 MUC17Q685J3 4493 aa9.05□□□□□ -0.96
RAF1-203ENST00000423275 KRTAP4-1Q9BYQ7 146 aa9.01□□□□□ -0.97
RAF1-203ENST00000423275 KRTAP12-1P59990 96 aa9.01□□□□□ -0.97
RAF1-203ENST00000423275 SPINT4Q6UDR6 99 aa8.99□□□□□ -0.97
RAF1-203ENST00000423275 SEC61BP60468 96 aaKnown RBP8.99□□□□□ -0.97
RAF1-203ENST00000423275 M0QZ58 72 aa8.94□□□□□ -0.98
RAF1-203ENST00000423275 C10orf95Q9H7T3 257 aa8.92□□□□□ -0.98
RAF1-203ENST00000423275 HERC1Q15751 4861 aa8.84□□□□□ -0.99
RAF1-203ENST00000423275 KRTAP19-2Q3LHN2 52 aa8.81□□□□□ -1
RAF1-203ENST00000423275 MUC2Q02817 5179 aa8.79□□□□□ -1
RAF1-203ENST00000423275 R4GN34 69 aa8.79□□□□□ -1
RAF1-203ENST00000423275 LORP23490 312 aaPredicted RBP8.77□□□□□ -1.01
RAF1-203ENST00000423275 HMCN2Q8NDA2 5059 aa8.68□□□□□ -1.02
RAF1-203ENST00000423275 FLGP20930 4061 aaPredicted RBP8.54□□□□□ -1.04
RAF1-203ENST00000423275 H3BS24 57 aa8.52□□□□□ -1.05
RAF1-203ENST00000423275 KRTAP15-1Q3LI76 137 aa8.45□□□□□ -1.06
RAF1-203ENST00000423275 FAT4Q6V0I7 4981 aa8.39□□□□□ -1.07
RAF1-203ENST00000423275 LCE2CQ5TA81 110 aa8.35□□□□□ -1.07
RAF1-203ENST00000423275 CAMK2N1Q7Z7J9 78 aa8.33□□□□□ -1.08
RAF1-203ENST00000423275 UBR4Q5T4S7 5183 aa8.28□□□□□ -1.08
RAF1-203ENST00000423275 NDUFAF8A1L188 74 aa8.22□□□□□ -1.09
RAF1-203ENST00000423275 RNF213Q63HN8 5207 aa8.21□□□□□ -1.1
RAF1-203ENST00000423275 PLAC4Q8WY50 150 aa8.12□□□□□ -1.11
RAF1-203ENST00000423275 MT1HP80294 61 aa8.11□□□□□ -1.11
RAF1-203ENST00000423275 PP632Q6XCG6 107 aa8.09□□□□□ -1.11
RAF1-203ENST00000423275 M0R2T5 61 aa8.08□□□□□ -1.12
RAF1-203ENST00000423275 KRTAP19-1Q8IUB9 90 aa8.04□□□□□ -1.12
RAF1-203ENST00000423275 SPRR2GQ9BYE4 73 aa8.03□□□□□ -1.12
RAF1-203ENST00000423275 TNP1P09430 55 aa7.99□□□□□ -1.13
RAF1-203ENST00000423275 MT1FP04733 61 aa7.96□□□□□ -1.14
RAF1-203ENST00000423275 MT2AP02795 61 aa7.95□□□□□ -1.14
RAF1-203ENST00000423275 LCE2AQ5TA79 106 aaPredicted RBP7.95□□□□□ -1.14
RAF1-203ENST00000423275 KRTAP9-8Q9BYQ0 159 aa7.92□□□□□ -1.14
RAF1-203ENST00000423275 KRTAP10-10P60014 251 aa7.9□□□□□ -1.14
RAF1-203ENST00000423275 KRTAP23-1A1A580 65 aa7.82□□□□□ -1.16
RAF1-203ENST00000423275 KRTAP19-8Q3LI54 63 aa7.7□□□□□ -1.18
RAF1-203ENST00000423275 KRTAP9-2Q9BYQ4 174 aa7.7□□□□□ -1.18
RAF1-203ENST00000423275 LUZP6Q538Z0 58 aa7.69□□□□□ -1.18
RAF1-203ENST00000423275 MT1BP07438 61 aa7.65□□□□□ -1.18
RAF1-203ENST00000423275 LCE3AQ5TA76 89 aa7.63□□□□□ -1.19
RAF1-203ENST00000423275 LCE2DQ5TA82 110 aaPredicted RBP7.63□□□□□ -1.19
RAF1-203ENST00000423275 KRTAP9-3Q9BYQ3 159 aa7.58□□□□□ -1.2
RAF1-203ENST00000423275 SPRR5A0A1B0GTR4 108 aa7.56□□□□□ -1.2
RAF1-203ENST00000423275 KRTAP10-5P60370 271 aa7.56□□□□□ -1.2
RAF1-203ENST00000423275 MT1XP80297 61 aa7.55□□□□□ -1.2
RAF1-203ENST00000423275 KRTAP9-6A0A140TA67 174 aa7.48□□□□□ -1.21
RAF1-203ENST00000423275 KRTAP8-1Q8IUC2 63 aa7.4□□□□□ -1.23
RAF1-203ENST00000423275 KRTAP10-7P60409 375 aaPredicted RBP7.35□□□□□ -1.23
RAF1-203ENST00000423275 KRTAP10-12P60413 245 aa7.33□□□□□ -1.24
RAF1-203ENST00000423275 LCE2BO14633 110 aa7.33□□□□□ -1.24
RAF1-203ENST00000423275 CRCT1Q9UGL9 99 aa7.3□□□□□ -1.24
RAF1-203ENST00000423275 USH2AO75445 5202 aa7.27□□□□□ -1.25
RAF1-203ENST00000423275 KRTAP12-3P60328 96 aa7.25□□□□□ -1.25
RAF1-203ENST00000423275 A0A0A0MQY5 61 aa7.23□□□□□ -1.25
RAF1-203ENST00000423275 PRO2289Q9P1D8 64 aa7.2□□□□□ -1.26
RAF1-203ENST00000423275 KMT2DO14686 5537 aa7.06□□□□□ -1.28
RAF1-203ENST00000423275 KRTAP19-5Q3LI72 72 aa7□□□□□ -1.29
RAF1-203ENST00000423275 KRTAP4-8A0A0G2JLE6 195 aa6.96□□□□□ -1.3
RAF1-203ENST00000423275 KRTAP4-8Q9BYQ9 185 aa6.96□□□□□ -1.3
RAF1-203ENST00000423275 LCE3CQ5T5A8 94 aa6.82□□□□□ -1.32
RAF1-203ENST00000423275 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.8□□□□□ -1.32
RAF1-203ENST00000423275 SSPOA2VEC9 5147 aa6.77□□□□□ -1.33
RAF1-203ENST00000423275 KRTAP19-6Q3LI70 58 aa6.75□□□□□ -1.33
RAF1-203ENST00000423275 FSIP2Q5CZC0 6907 aa6.74□□□□□ -1.33
RAF1-203ENST00000423275 KRTAP19-7Q3SYF9 63 aa6.74□□□□□ -1.33
RAF1-203ENST00000423275 KRTAP9-7A8MTY7 169 aa6.71□□□□□ -1.34
RAF1-203ENST00000423275 KRTAP9-6A8MVA2 160 aa6.62□□□□□ -1.35
RAF1-203ENST00000423275 KRTAP4-7Q9BYR0 210 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms