RNA–Protein interactions for RNA: ENST00000423239.6

RC3H2-205, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 5 BASIC

Gene RC3H2, Length 3,623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-205ENST00000423239 KRTAP4-5Q9BYR2 181 aa7.11□□□□□ -1.27
RC3H2-205ENST00000423239 TNXBP22105 4242 aa7.1□□□□□ -1.27
RC3H2-205ENST00000423239 A6NN06 94 aa7.1□□□□□ -1.27
RC3H2-205ENST00000423239 KTN1-AS1Q86SY8 53 aa7.1□□□□□ -1.27
RC3H2-205ENST00000423239 EPPK1P58107 5090 aaKnown RBP7.09□□□□□ -1.27
RC3H2-205ENST00000423239 S4R3F8 94 aa7.07□□□□□ -1.28
RC3H2-205ENST00000423239 H1FX-AS1Q4G0G2 97 aa7.03□□□□□ -1.28
RC3H2-205ENST00000423239 RBM12B-AS1Q9P1G2 102 aa7.03□□□□□ -1.28
RC3H2-205ENST00000423239 TPRXLQ17RH7 258 aa6.99□□□□□ -1.29
RC3H2-205ENST00000423239 PRAC1Q96KF2 57 aa6.99□□□□□ -1.29
RC3H2-205ENST00000423239 A0A0D9SG42 100 aa6.99□□□□□ -1.29
RC3H2-205ENST00000423239 K7ERS5 55 aa6.98□□□□□ -1.29
RC3H2-205ENST00000423239 H0YAA0 97 aa6.97□□□□□ -1.29
RC3H2-205ENST00000423239 ADM2Q7Z4H4 148 aa6.95□□□□□ -1.3
RC3H2-205ENST00000423239 LRP2P98164 4655 aa6.93□□□□□ -1.3
RC3H2-205ENST00000423239 CSAG1Q6PB30 78 aa6.9□□□□□ -1.3
RC3H2-205ENST00000423239 SEC61BP60468 96 aaKnown RBP6.9□□□□□ -1.31
RC3H2-205ENST00000423239 KRTAP3-3Q9BYR6 98 aa6.89□□□□□ -1.31
RC3H2-205ENST00000423239 LPAP08519 4548 aa6.87□□□□□ -1.31
RC3H2-205ENST00000423239 P0C880 135 aa6.84□□□□□ -1.31
RC3H2-205ENST00000423239 ABCA13Q86UQ4 5058 aa6.83□□□□□ -1.32
RC3H2-205ENST00000423239 KRTAP10-6P60371 365 aaPredicted RBP6.8□□□□□ -1.32
RC3H2-205ENST00000423239 HERC2O95714 4834 aa6.79□□□□□ -1.32
RC3H2-205ENST00000423239 SPINT4Q6UDR6 99 aa6.78□□□□□ -1.32
RC3H2-205ENST00000423239 LINC01554Q52M75 96 aa6.77□□□□□ -1.32
RC3H2-205ENST00000423239 CRIPTQ9P021 101 aa6.77□□□□□ -1.33
RC3H2-205ENST00000423239 KRTAP13-4Q3LI77 160 aa6.75□□□□□ -1.33
RC3H2-205ENST00000423239 KRTAP3-2Q9BYR7 98 aa6.75□□□□□ -1.33
RC3H2-205ENST00000423239 M0QZ58 72 aa6.66□□□□□ -1.34
RC3H2-205ENST00000423239 R4GN34 69 aa6.65□□□□□ -1.34
RC3H2-205ENST00000423239 KRTAP4-1Q9BYQ7 146 aa6.64□□□□□ -1.35
RC3H2-205ENST00000423239 ROMO1P60602 79 aa6.61□□□□□ -1.35
RC3H2-205ENST00000423239 BIRC6Q9NR09 4857 aa6.58□□□□□ -1.36
RC3H2-205ENST00000423239 KRTAP12-2P59991 146 aa6.56□□□□□ -1.36
RC3H2-205ENST00000423239 KRTAP25-1Q3LHN0 102 aa6.53□□□□□ -1.36
RC3H2-205ENST00000423239 KRTAP12-1P59990 96 aa6.49□□□□□ -1.37
RC3H2-205ENST00000423239 MUC2Q02817 5179 aa6.49□□□□□ -1.37
RC3H2-205ENST00000423239 HERC1Q15751 4861 aa6.47□□□□□ -1.37
RC3H2-205ENST00000423239 C10orf95Q9H7T3 257 aa6.45□□□□□ -1.38
RC3H2-205ENST00000423239 M0R2T5 61 aa6.43□□□□□ -1.38
RC3H2-205ENST00000423239 LORP23490 312 aaPredicted RBP6.43□□□□□ -1.38
RC3H2-205ENST00000423239 MUC17Q685J3 4493 aa6.41□□□□□ -1.38
RC3H2-205ENST00000423239 CAMK2N1Q7Z7J9 78 aa6.38□□□□□ -1.39
RC3H2-205ENST00000423239 PCLOQ9Y6V0 5065 aa6.37□□□□□ -1.39
RC3H2-205ENST00000423239 H3BS24 57 aa6.29□□□□□ -1.4
RC3H2-205ENST00000423239 KRTAP19-2Q3LHN2 52 aa6.28□□□□□ -1.4
RC3H2-205ENST00000423239 HMCN2Q8NDA2 5059 aa6.25□□□□□ -1.41
RC3H2-205ENST00000423239 RNF213Q63HN8 5207 aa6.2□□□□□ -1.42
RC3H2-205ENST00000423239 FAT4Q6V0I7 4981 aa6.2□□□□□ -1.42
RC3H2-205ENST00000423239 FLGP20930 4061 aaPredicted RBP6.17□□□□□ -1.42
RC3H2-205ENST00000423239 UBR4Q5T4S7 5183 aa6.13□□□□□ -1.43
RC3H2-205ENST00000423239 KRTAP10-10P60014 251 aa6.11□□□□□ -1.43
RC3H2-205ENST00000423239 PLAC4Q8WY50 150 aa6.09□□□□□ -1.43
RC3H2-205ENST00000423239 LCE2CQ5TA81 110 aa6.08□□□□□ -1.44
RC3H2-205ENST00000423239 MT1HP80294 61 aa6.03□□□□□ -1.44
RC3H2-205ENST00000423239 TNP1P09430 55 aa5.98□□□□□ -1.45
RC3H2-205ENST00000423239 MT2AP02795 61 aa5.9□□□□□ -1.46
RC3H2-205ENST00000423239 MT1FP04733 61 aa5.9□□□□□ -1.47
RC3H2-205ENST00000423239 KRTAP19-1Q8IUB9 90 aa5.87□□□□□ -1.47
RC3H2-205ENST00000423239 PP632Q6XCG6 107 aa5.86□□□□□ -1.47
RC3H2-205ENST00000423239 SPRR2GQ9BYE4 73 aa5.86□□□□□ -1.47
RC3H2-205ENST00000423239 NDUFAF8A1L188 74 aa5.82□□□□□ -1.48
RC3H2-205ENST00000423239 KRTAP9-8Q9BYQ0 159 aa5.8□□□□□ -1.48
RC3H2-205ENST00000423239 KRTAP15-1Q3LI76 137 aa5.79□□□□□ -1.48
RC3H2-205ENST00000423239 LUZP6Q538Z0 58 aa5.67□□□□□ -1.5
RC3H2-205ENST00000423239 LCE3AQ5TA76 89 aa5.61□□□□□ -1.51
RC3H2-205ENST00000423239 KRTAP19-8Q3LI54 63 aa5.6□□□□□ -1.51
RC3H2-205ENST00000423239 MT1BP07438 61 aa5.6□□□□□ -1.51
RC3H2-205ENST00000423239 KRTAP9-3Q9BYQ3 159 aa5.57□□□□□ -1.52
RC3H2-205ENST00000423239 PRO2289Q9P1D8 64 aa5.54□□□□□ -1.52
RC3H2-205ENST00000423239 KRTAP23-1A1A580 65 aa5.54□□□□□ -1.52
RC3H2-205ENST00000423239 MT1XP80297 61 aa5.52□□□□□ -1.53
RC3H2-205ENST00000423239 KRTAP10-5P60370 271 aa5.51□□□□□ -1.53
RC3H2-205ENST00000423239 KRTAP10-12P60413 245 aa5.48□□□□□ -1.53
RC3H2-205ENST00000423239 USH2AO75445 5202 aa5.44□□□□□ -1.54
RC3H2-205ENST00000423239 A0A0A0MQY5 61 aa5.43□□□□□ -1.54
RC3H2-205ENST00000423239 LCE2BO14633 110 aa5.42□□□□□ -1.54
RC3H2-205ENST00000423239 KRTAP10-7P60409 375 aaPredicted RBP5.42□□□□□ -1.54
RC3H2-205ENST00000423239 LCE2AQ5TA79 106 aaPredicted RBP5.38□□□□□ -1.55
RC3H2-205ENST00000423239 KRTAP12-3P60328 96 aa5.37□□□□□ -1.55
RC3H2-205ENST00000423239 KRTAP8-1Q8IUC2 63 aa5.34□□□□□ -1.56
RC3H2-205ENST00000423239 FSIP2Q5CZC0 6907 aa5.32□□□□□ -1.56
RC3H2-205ENST00000423239 KMT2DO14686 5537 aa5.23□□□□□ -1.57
RC3H2-205ENST00000423239 KRTAP4-8A0A0G2JLE6 195 aa5.2□□□□□ -1.58
RC3H2-205ENST00000423239 KRTAP4-8Q9BYQ9 185 aa5.2□□□□□ -1.58
RC3H2-205ENST00000423239 KRTAP19-5Q3LI72 72 aa5.19□□□□□ -1.58
RC3H2-205ENST00000423239 SPRR5A0A1B0GTR4 108 aa5.16□□□□□ -1.58
RC3H2-205ENST00000423239 SSPOA2VEC9 5147 aa5.01□□□□□ -1.61
RC3H2-205ENST00000423239 LCE3CQ5T5A8 94 aa4.97□□□□□ -1.61
RC3H2-205ENST00000423239 KRTAP19-7Q3SYF9 63 aa4.89□□□□□ -1.63
RC3H2-205ENST00000423239 KRTAP4-7Q9BYR0 210 aa4.89□□□□□ -1.63
RC3H2-205ENST00000423239 KRTAP19-6Q3LI70 58 aa4.87□□□□□ -1.63
RC3H2-205ENST00000423239 MT1EP04732 61 aa4.8□□□□□ -1.64
RC3H2-205ENST00000423239 KRTAP9-6A0A140TA67 174 aa4.78□□□□□ -1.64
RC3H2-205ENST00000423239 MT1LQ93083 61 aa4.78□□□□□ -1.64
RC3H2-205ENST00000423239 FCGBPQ9Y6R7 5405 aaPredicted RBP4.74□□□□□ -1.65
RC3H2-205ENST00000423239 KRTAP9-2Q9BYQ4 174 aa4.73□□□□□ -1.65
RC3H2-205ENST00000423239 MUC12Q9UKN1 5478 aa4.72□□□□□ -1.65
RC3H2-205ENST00000423239 CRCT1Q9UGL9 99 aa4.71□□□□□ -1.66
RC3H2-205ENST00000423239 KRTAP9-6A8MVA2 160 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms