RNA–Protein interactions for RNA: ENST00000420394.5

SSUH2-205, Transcript of ssu-2 homolog (C. elegans), humanhuman

TSL 1 (best)

Gene SSUH2, Length 1,634 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSUH2-205ENST00000420394 LCA10Q71F78 164 aa10.44□□□□□ -0.74
SSUH2-205ENST00000420394 UQCR11O14957 56 aa10.41□□□□□ -0.74
SSUH2-205ENST00000420394 SEC61BP60468 96 aaKnown RBP10.39□□□□□ -0.75
SSUH2-205ENST00000420394 ABCA13Q86UQ4 5058 aa10.39□□□□□ -0.75
SSUH2-205ENST00000420394 RBM12B-AS1Q9P1G2 102 aa10.36□□□□□ -0.75
SSUH2-205ENST00000420394 S4R3F8 94 aa10.34□□□□□ -0.75
SSUH2-205ENST00000420394 H1FX-AS1Q4G0G2 97 aa10.33□□□□□ -0.76
SSUH2-205ENST00000420394 SPATA8Q6RVD6 105 aa10.33□□□□□ -0.76
SSUH2-205ENST00000420394 A8MU10 97 aa10.31□□□□□ -0.76
SSUH2-205ENST00000420394 MIR22HGQ0VDD5 57 aa10.29□□□□□ -0.76
SSUH2-205ENST00000420394 LRP2P98164 4655 aa10.28□□□□□ -0.76
SSUH2-205ENST00000420394 KRTAP3-3Q9BYR6 98 aa10.25□□□□□ -0.77
SSUH2-205ENST00000420394 PMAIP1Q13794 54 aa10.21□□□□□ -0.78
SSUH2-205ENST00000420394 LPAP08519 4548 aa10.19□□□□□ -0.78
SSUH2-205ENST00000420394 A0A1B0GU33 70 aa10.18□□□□□ -0.78
SSUH2-205ENST00000420394 A6NN06 94 aa10.08□□□□□ -0.8
SSUH2-205ENST00000420394 CSAG1Q6PB30 78 aa10.08□□□□□ -0.8
SSUH2-205ENST00000420394 MUC17Q685J3 4493 aa10.06□□□□□ -0.8
SSUH2-205ENST00000420394 H0YAA0 97 aa10.04□□□□□ -0.8
SSUH2-205ENST00000420394 KRTAP10-6P60371 365 aaPredicted RBP10.02□□□□□ -0.81
SSUH2-205ENST00000420394 KRTAP3-2Q9BYR7 98 aa9.99□□□□□ -0.81
SSUH2-205ENST00000420394 KRTAP4-1Q9BYQ7 146 aa9.94□□□□□ -0.82
SSUH2-205ENST00000420394 KTN1-AS1Q86SY8 53 aa9.93□□□□□ -0.82
SSUH2-205ENST00000420394 ADM2Q7Z4H4 148 aa9.89□□□□□ -0.83
SSUH2-205ENST00000420394 PCLOQ9Y6V0 5065 aa9.89□□□□□ -0.83
SSUH2-205ENST00000420394 K7ERS5 55 aa9.85□□□□□ -0.83
SSUH2-205ENST00000420394 P0C880 135 aa9.84□□□□□ -0.83
SSUH2-205ENST00000420394 KRTAP19-2Q3LHN2 52 aa9.8□□□□□ -0.84
SSUH2-205ENST00000420394 HMCN2Q8NDA2 5059 aa9.79□□□□□ -0.84
SSUH2-205ENST00000420394 HERC1Q15751 4861 aa9.78□□□□□ -0.84
SSUH2-205ENST00000420394 M0QZ58 72 aa9.78□□□□□ -0.84
SSUH2-205ENST00000420394 KRTAP13-4Q3LI77 160 aa9.74□□□□□ -0.85
SSUH2-205ENST00000420394 A0A0D9SG42 100 aa9.63□□□□□ -0.87
SSUH2-205ENST00000420394 FLGP20930 4061 aaPredicted RBP9.57□□□□□ -0.88
SSUH2-205ENST00000420394 R4GN34 69 aa9.56□□□□□ -0.88
SSUH2-205ENST00000420394 KRTAP12-1P59990 96 aa9.45□□□□□ -0.9
SSUH2-205ENST00000420394 ROMO1P60602 79 aa9.44□□□□□ -0.9
SSUH2-205ENST00000420394 PRAC1Q96KF2 57 aa9.43□□□□□ -0.9
SSUH2-205ENST00000420394 KRTAP12-2P59991 146 aa9.42□□□□□ -0.9
SSUH2-205ENST00000420394 CRIPTQ9P021 101 aa9.42□□□□□ -0.9
SSUH2-205ENST00000420394 LCE2CQ5TA81 110 aa9.41□□□□□ -0.9
SSUH2-205ENST00000420394 SPINT4Q6UDR6 99 aa9.41□□□□□ -0.9
SSUH2-205ENST00000420394 MUC2Q02817 5179 aa9.41□□□□□ -0.9
SSUH2-205ENST00000420394 LORP23490 312 aaPredicted RBP9.33□□□□□ -0.92
SSUH2-205ENST00000420394 LINC01554Q52M75 96 aa9.32□□□□□ -0.92
SSUH2-205ENST00000420394 RNF213Q63HN8 5207 aa9.24□□□□□ -0.93
SSUH2-205ENST00000420394 MT1HP80294 61 aa9.23□□□□□ -0.93
SSUH2-205ENST00000420394 KRTAP25-1Q3LHN0 102 aa9.23□□□□□ -0.93
SSUH2-205ENST00000420394 M0R2T5 61 aa9.21□□□□□ -0.93
SSUH2-205ENST00000420394 UBR4Q5T4S7 5183 aa9.17□□□□□ -0.94
SSUH2-205ENST00000420394 FAT4Q6V0I7 4981 aa9.05□□□□□ -0.96
SSUH2-205ENST00000420394 SPRR2GQ9BYE4 73 aa9.03□□□□□ -0.96
SSUH2-205ENST00000420394 CAMK2N1Q7Z7J9 78 aa9□□□□□ -0.97
SSUH2-205ENST00000420394 MT2AP02795 61 aa8.94□□□□□ -0.98
SSUH2-205ENST00000420394 KRTAP9-8Q9BYQ0 159 aa8.93□□□□□ -0.98
SSUH2-205ENST00000420394 KRTAP10-10P60014 251 aa8.91□□□□□ -0.98
SSUH2-205ENST00000420394 C10orf95Q9H7T3 257 aa8.91□□□□□ -0.98
SSUH2-205ENST00000420394 KRTAP19-1Q8IUB9 90 aa8.89□□□□□ -0.99
SSUH2-205ENST00000420394 MT1FP04733 61 aa8.88□□□□□ -0.99
SSUH2-205ENST00000420394 PLAC4Q8WY50 150 aa8.85□□□□□ -0.99
SSUH2-205ENST00000420394 KRTAP19-8Q3LI54 63 aa8.72□□□□□ -1.01
SSUH2-205ENST00000420394 PP632Q6XCG6 107 aa8.69□□□□□ -1.02
SSUH2-205ENST00000420394 TNP1P09430 55 aa8.66□□□□□ -1.02
SSUH2-205ENST00000420394 KRTAP9-3Q9BYQ3 159 aa8.61□□□□□ -1.03
SSUH2-205ENST00000420394 KRTAP23-1A1A580 65 aa8.59□□□□□ -1.03
SSUH2-205ENST00000420394 LCE2AQ5TA79 106 aaPredicted RBP8.59□□□□□ -1.03
SSUH2-205ENST00000420394 MT1BP07438 61 aa8.51□□□□□ -1.05
SSUH2-205ENST00000420394 MT1XP80297 61 aa8.33□□□□□ -1.08
SSUH2-205ENST00000420394 KRTAP10-5P60370 271 aa8.32□□□□□ -1.08
SSUH2-205ENST00000420394 PRO2289Q9P1D8 64 aa8.32□□□□□ -1.08
SSUH2-205ENST00000420394 LCE2BO14633 110 aa8.25□□□□□ -1.09
SSUH2-205ENST00000420394 KRTAP15-1Q3LI76 137 aa8.23□□□□□ -1.09
SSUH2-205ENST00000420394 LCE3AQ5TA76 89 aa8.12□□□□□ -1.11
SSUH2-205ENST00000420394 KRTAP10-12P60413 245 aa8.09□□□□□ -1.11
SSUH2-205ENST00000420394 KRTAP8-1Q8IUC2 63 aa8.05□□□□□ -1.12
SSUH2-205ENST00000420394 KRTAP10-7P60409 375 aaPredicted RBP7.99□□□□□ -1.13
SSUH2-205ENST00000420394 USH2AO75445 5202 aa7.88□□□□□ -1.15
SSUH2-205ENST00000420394 KRTAP12-3P60328 96 aa7.84□□□□□ -1.15
SSUH2-205ENST00000420394 SPRR5A0A1B0GTR4 108 aa7.78□□□□□ -1.16
SSUH2-205ENST00000420394 LUZP6Q538Z0 58 aa7.77□□□□□ -1.17
SSUH2-205ENST00000420394 NDUFAF8A1L188 74 aa7.75□□□□□ -1.17
SSUH2-205ENST00000420394 KRTAP19-6Q3LI70 58 aa7.74□□□□□ -1.17
SSUH2-205ENST00000420394 LCE2DQ5TA82 110 aaPredicted RBP7.72□□□□□ -1.17
SSUH2-205ENST00000420394 SSPOA2VEC9 5147 aa7.65□□□□□ -1.19
SSUH2-205ENST00000420394 KRTAP19-5Q3LI72 72 aa7.6□□□□□ -1.19
SSUH2-205ENST00000420394 H3BS24 57 aa7.59□□□□□ -1.19
SSUH2-205ENST00000420394 KRTAP4-8A0A0G2JLE6 195 aa7.52□□□□□ -1.2
SSUH2-205ENST00000420394 KRTAP4-8Q9BYQ9 185 aa7.52□□□□□ -1.2
SSUH2-205ENST00000420394 KRTAP19-4Q3LI73 84 aa7.48□□□□□ -1.21
SSUH2-205ENST00000420394 KRTAP19-7Q3SYF9 63 aa7.42□□□□□ -1.22
SSUH2-205ENST00000420394 KMT2DO14686 5537 aa7.34□□□□□ -1.23
SSUH2-205ENST00000420394 LCE3CQ5T5A8 94 aa7.34□□□□□ -1.23
SSUH2-205ENST00000420394 MT1EP04732 61 aa7.3□□□□□ -1.24
SSUH2-205ENST00000420394 MT1LQ93083 61 aa7.2□□□□□ -1.26
SSUH2-205ENST00000420394 FSIP2Q5CZC0 6907 aa7.18□□□□□ -1.26
SSUH2-205ENST00000420394 FCGBPQ9Y6R7 5405 aaPredicted RBP7.17□□□□□ -1.26
SSUH2-205ENST00000420394 KRTAP9-2Q9BYQ4 174 aa7.12□□□□□ -1.27
SSUH2-205ENST00000420394 A0A0A0MQY5 61 aa7.01□□□□□ -1.29
SSUH2-205ENST00000420394 KRTAP19-3Q7Z4W3 81 aa6.96□□□□□ -1.3
SSUH2-205ENST00000420394 CRCT1Q9UGL9 99 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms