RNA–Protein interactions for RNA: ENST00000420222.1

SH3PXD2A-204, Transcript of SH3 and PX domains 2A, humanhuman

TSL 2

Gene SH3PXD2A, Length 3,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-204ENST00000420222 MYCBP2O75592 4640 aa7.72□□□□□ -1.17
SH3PXD2A-204ENST00000420222 KRTAP10-6P60371 365 aaPredicted RBP7.71□□□□□ -1.18
SH3PXD2A-204ENST00000420222 SACSQ9NZJ4 4579 aa7.7□□□□□ -1.18
SH3PXD2A-204ENST00000420222 S4R3F8 94 aa7.67□□□□□ -1.18
SH3PXD2A-204ENST00000420222 KRTAP10-8P60410 259 aa7.66□□□□□ -1.18
SH3PXD2A-204ENST00000420222 KRTAP3-3Q9BYR6 98 aa7.65□□□□□ -1.18
SH3PXD2A-204ENST00000420222 NDUFAF8A1L188 74 aa7.65□□□□□ -1.18
SH3PXD2A-204ENST00000420222 LRP1Q07954 4544 aaKnown RBP7.64□□□□□ -1.19
SH3PXD2A-204ENST00000420222 HSPG2P98160 4391 aa7.61□□□□□ -1.19
SH3PXD2A-204ENST00000420222 KRTAP3-2Q9BYR7 98 aa7.6□□□□□ -1.19
SH3PXD2A-204ENST00000420222 KRTAP12-2P59991 146 aa7.6□□□□□ -1.19
SH3PXD2A-204ENST00000420222 APOBP04114 4563 aaKnown RBP7.55□□□□□ -1.2
SH3PXD2A-204ENST00000420222 KRTAP10-4P60372 401 aaPredicted RBP7.53□□□□□ -1.2
SH3PXD2A-204ENST00000420222 PKHD1L1Q86WI1 4243 aa7.52□□□□□ -1.21
SH3PXD2A-204ENST00000420222 XP32Q5T750 250 aa7.48□□□□□ -1.21
SH3PXD2A-204ENST00000420222 FAT3Q8TDW7 4589 aa7.46□□□□□ -1.22
SH3PXD2A-204ENST00000420222 KRTAP12-1P59990 96 aa7.43□□□□□ -1.22
SH3PXD2A-204ENST00000420222 LPAP08519 4548 aa7.41□□□□□ -1.22
SH3PXD2A-204ENST00000420222 KRTAP15-1Q3LI76 137 aa7.41□□□□□ -1.22
SH3PXD2A-204ENST00000420222 A0A1B0GVY2 172 aa7.39□□□□□ -1.23
SH3PXD2A-204ENST00000420222 Q5VSD8 79 aa7.36□□□□□ -1.23
SH3PXD2A-204ENST00000420222 KMT2CQ8NEZ4 4911 aaKnown RBP7.33□□□□□ -1.24
SH3PXD2A-204ENST00000420222 TNXBP22105 4242 aa7.31□□□□□ -1.24
SH3PXD2A-204ENST00000420222 M0QZ58 72 aa7.31□□□□□ -1.24
SH3PXD2A-204ENST00000420222 LRP2P98164 4655 aa7.29□□□□□ -1.24
SH3PXD2A-204ENST00000420222 R4GN34 69 aa7.24□□□□□ -1.25
SH3PXD2A-204ENST00000420222 RYR2Q92736 4967 aa7.16□□□□□ -1.26
SH3PXD2A-204ENST00000420222 KRTAP17-1Q9BYP8 105 aa7.12□□□□□ -1.27
SH3PXD2A-204ENST00000420222 KIAA1109Q2LD37 5005 aa7.11□□□□□ -1.27
SH3PXD2A-204ENST00000420222 PLAC4Q8WY50 150 aa7.08□□□□□ -1.28
SH3PXD2A-204ENST00000420222 RYR1P21817 5038 aa7.07□□□□□ -1.28
SH3PXD2A-204ENST00000420222 LORP23490 312 aaPredicted RBP7.07□□□□□ -1.28
SH3PXD2A-204ENST00000420222 MT1HL1P0DM35 61 aa7.04□□□□□ -1.28
SH3PXD2A-204ENST00000420222 RYR3Q15413 4870 aa7□□□□□ -1.29
SH3PXD2A-204ENST00000420222 CAMK2N1Q7Z7J9 78 aa6.99□□□□□ -1.29
SH3PXD2A-204ENST00000420222 ABCA13Q86UQ4 5058 aa6.98□□□□□ -1.29
SH3PXD2A-204ENST00000420222 LUZP6Q538Z0 58 aa6.92□□□□□ -1.3
SH3PXD2A-204ENST00000420222 A0A0A0MQY5 61 aa6.83□□□□□ -1.32
SH3PXD2A-204ENST00000420222 MUC2Q02817 5179 aa6.8□□□□□ -1.32
SH3PXD2A-204ENST00000420222 KRTAP4-1Q9BYQ7 146 aa6.76□□□□□ -1.33
SH3PXD2A-204ENST00000420222 SEC61BP60468 96 aaKnown RBP6.75□□□□□ -1.33
SH3PXD2A-204ENST00000420222 KRTAP4-5Q9BYR2 181 aa6.75□□□□□ -1.33
SH3PXD2A-204ENST00000420222 EPPK1P58107 5090 aaKnown RBP6.73□□□□□ -1.33
SH3PXD2A-204ENST00000420222 MUC17Q685J3 4493 aa6.68□□□□□ -1.34
SH3PXD2A-204ENST00000420222 PP632Q6XCG6 107 aa6.66□□□□□ -1.34
SH3PXD2A-204ENST00000420222 J3QL48 77 aa6.64□□□□□ -1.35
SH3PXD2A-204ENST00000420222 KRTAP21-3Q3LHN1 58 aa6.63□□□□□ -1.35
SH3PXD2A-204ENST00000420222 TNP1P09430 55 aa6.59□□□□□ -1.35
SH3PXD2A-204ENST00000420222 KRTAP19-2Q3LHN2 52 aa6.42□□□□□ -1.38
SH3PXD2A-204ENST00000420222 PCLOQ9Y6V0 5065 aa6.42□□□□□ -1.38
SH3PXD2A-204ENST00000420222 FAT4Q6V0I7 4981 aa6.41□□□□□ -1.38
SH3PXD2A-204ENST00000420222 HERC2O95714 4834 aa6.38□□□□□ -1.39
SH3PXD2A-204ENST00000420222 FLGP20930 4061 aaPredicted RBP6.34□□□□□ -1.39
SH3PXD2A-204ENST00000420222 M0R2T5 61 aa6.32□□□□□ -1.4
SH3PXD2A-204ENST00000420222 LCE3AQ5TA76 89 aa6.25□□□□□ -1.41
SH3PXD2A-204ENST00000420222 SPRR5A0A1B0GTR4 108 aa6.23□□□□□ -1.41
SH3PXD2A-204ENST00000420222 HERC1Q15751 4861 aa6.21□□□□□ -1.41
SH3PXD2A-204ENST00000420222 RNF213Q63HN8 5207 aa6.18□□□□□ -1.42
SH3PXD2A-204ENST00000420222 KRTAP23-1A1A580 65 aa6.13□□□□□ -1.43
SH3PXD2A-204ENST00000420222 KRTAP10-10P60014 251 aa6.1□□□□□ -1.43
SH3PXD2A-204ENST00000420222 KRTAP19-1Q8IUB9 90 aa6.1□□□□□ -1.43
SH3PXD2A-204ENST00000420222 BIRC6Q9NR09 4857 aa6.09□□□□□ -1.43
SH3PXD2A-204ENST00000420222 HMCN2Q8NDA2 5059 aa6.09□□□□□ -1.44
SH3PXD2A-204ENST00000420222 SPRR2GQ9BYE4 73 aa6.04□□□□□ -1.44
SH3PXD2A-204ENST00000420222 LCE2CQ5TA81 110 aa5.99□□□□□ -1.45
SH3PXD2A-204ENST00000420222 MT1FP04733 61 aa5.95□□□□□ -1.46
SH3PXD2A-204ENST00000420222 UBR4Q5T4S7 5183 aa5.94□□□□□ -1.46
SH3PXD2A-204ENST00000420222 PRO2289Q9P1D8 64 aa5.94□□□□□ -1.46
SH3PXD2A-204ENST00000420222 MT2AP02795 61 aa5.89□□□□□ -1.47
SH3PXD2A-204ENST00000420222 KRTAP12-3P60328 96 aa5.89□□□□□ -1.47
SH3PXD2A-204ENST00000420222 MT1HP80294 61 aa5.89□□□□□ -1.47
SH3PXD2A-204ENST00000420222 KRTAP10-12P60413 245 aa5.86□□□□□ -1.47
SH3PXD2A-204ENST00000420222 KRTAP8-1Q8IUC2 63 aa5.86□□□□□ -1.47
SH3PXD2A-204ENST00000420222 KRTAP10-5P60370 271 aa5.79□□□□□ -1.48
SH3PXD2A-204ENST00000420222 INE1O15225 51 aa5.79□□□□□ -1.48
SH3PXD2A-204ENST00000420222 MT1XP80297 61 aa5.79□□□□□ -1.48
SH3PXD2A-204ENST00000420222 KRTAP10-7P60409 375 aaPredicted RBP5.78□□□□□ -1.48
SH3PXD2A-204ENST00000420222 KMT2DO14686 5537 aa5.76□□□□□ -1.49
SH3PXD2A-204ENST00000420222 KRTAP9-8Q9BYQ0 159 aa5.75□□□□□ -1.49
SH3PXD2A-204ENST00000420222 MT1BP07438 61 aa5.73□□□□□ -1.49
SH3PXD2A-204ENST00000420222 USH2AO75445 5202 aa5.68□□□□□ -1.5
SH3PXD2A-204ENST00000420222 KRTAP19-8Q3LI54 63 aa5.66□□□□□ -1.5
SH3PXD2A-204ENST00000420222 KRTAP19-5Q3LI72 72 aa5.58□□□□□ -1.52
SH3PXD2A-204ENST00000420222 LCE3CQ5T5A8 94 aa5.49□□□□□ -1.53
SH3PXD2A-204ENST00000420222 KRTAP4-8A0A0G2JLE6 195 aa5.46□□□□□ -1.54
SH3PXD2A-204ENST00000420222 KRTAP4-8Q9BYQ9 185 aa5.46□□□□□ -1.54
SH3PXD2A-204ENST00000420222 KRTAP9-3Q9BYQ3 159 aa5.46□□□□□ -1.54
SH3PXD2A-204ENST00000420222 KRTAP4-7Q9BYR0 210 aa5.42□□□□□ -1.54
SH3PXD2A-204ENST00000420222 KRTAP9-6A8MVA2 160 aa5.4□□□□□ -1.55
SH3PXD2A-204ENST00000420222 LCE2BO14633 110 aa5.31□□□□□ -1.56
SH3PXD2A-204ENST00000420222 FSIP2Q5CZC0 6907 aa5.2□□□□□ -1.58
SH3PXD2A-204ENST00000420222 KRTAP19-7Q3SYF9 63 aa5.13□□□□□ -1.59
SH3PXD2A-204ENST00000420222 CRCT1Q9UGL9 99 aa5.12□□□□□ -1.59
SH3PXD2A-204ENST00000420222 KRTAP2-3P0C7H8 128 aa5.1□□□□□ -1.59
SH3PXD2A-204ENST00000420222 KRTAP2-4Q9BYR9 128 aa5.1□□□□□ -1.59
SH3PXD2A-204ENST00000420222 KRTAP2-1Q9BYU5 128 aa5.1□□□□□ -1.59
SH3PXD2A-204ENST00000420222 DSTQ03001 7570 aaKnown RBP5.05□□□□□ -1.6
SH3PXD2A-204ENST00000420222 LOC100996750A0A140TA64 210 aa5.03□□□□□ -1.6
SH3PXD2A-204ENST00000420222 MT1LQ93083 61 aa5.01□□□□□ -1.61
SH3PXD2A-204ENST00000420222 KRTAP4-3Q9BYR4 195 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 209.6 ms