RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 NBASA2RRP1 2371 aa1.7□□□□□ -2.14
SDCBPP3-201ENST00000419629 KRTAP13-2Q52LG2 175 aa1.7□□□□□ -2.14
SDCBPP3-201ENST00000419629 RYR3Q15413 4870 aa1.69□□□□□ -2.14
SDCBPP3-201ENST00000419629 NOTCH1P46531 2555 aa1.69□□□□□ -2.14
SDCBPP3-201ENST00000419629 BIRC6Q9NR09 4857 aa1.68□□□□□ -2.14
SDCBPP3-201ENST00000419629 CSPG4Q6UVK1 2322 aa1.68□□□□□ -2.14
SDCBPP3-201ENST00000419629 TACC2O95359 2948 aa1.68□□□□□ -2.14
SDCBPP3-201ENST00000419629 DCHS2Q6V1P9 2916 aa1.68□□□□□ -2.14
SDCBPP3-201ENST00000419629 KMT2CQ8NEZ4 4911 aaKnown RBP1.68□□□□□ -2.14
SDCBPP3-201ENST00000419629 ANK2Q01484 3957 aa1.68□□□□□ -2.14
SDCBPP3-201ENST00000419629 TGP01266 2768 aa1.68□□□□□ -2.14
SDCBPP3-201ENST00000419629 ZNF469Q96JG9 3925 aaPredicted RBP1.68□□□□□ -2.14
SDCBPP3-201ENST00000419629 COL6A5A8TX70 2615 aa1.67□□□□□ -2.14
SDCBPP3-201ENST00000419629 SPACA4Q8TDM5 124 aa1.67□□□□□ -2.14
SDCBPP3-201ENST00000419629 NSD1Q96L73 2696 aaPredicted RBP1.67□□□□□ -2.14
SDCBPP3-201ENST00000419629 FLNAP21333 2647 aaKnown RBP1.67□□□□□ -2.14
SDCBPP3-201ENST00000419629 NBEAL2Q6ZNJ1 2754 aa1.66□□□□□ -2.14
SDCBPP3-201ENST00000419629 ACANP16112 2415 aa1.66□□□□□ -2.14
SDCBPP3-201ENST00000419629 PLAC4Q8WY50 150 aa1.66□□□□□ -2.14
SDCBPP3-201ENST00000419629 C10orf95Q9H7T3 257 aa1.66□□□□□ -2.14
SDCBPP3-201ENST00000419629 MXRA5Q9NR99 2828 aa1.65□□□□□ -2.14
SDCBPP3-201ENST00000419629 TLN2Q9Y4G6 2542 aa1.65□□□□□ -2.15
SDCBPP3-201ENST00000419629 UBE2DNLQ8IWF7 75 aa1.65□□□□□ -2.15
SDCBPP3-201ENST00000419629 MEGF8Q7Z7M0 2845 aa1.65□□□□□ -2.15
SDCBPP3-201ENST00000419629 DNAH1Q9P2D7 4330 aa1.64□□□□□ -2.15
SDCBPP3-201ENST00000419629 APLNQ9ULZ1 77 aa1.64□□□□□ -2.15
SDCBPP3-201ENST00000419629 S4R3F8 94 aa1.64□□□□□ -2.15
SDCBPP3-201ENST00000419629 HMCN1Q96RW7 5635 aa1.64□□□□□ -2.15
SDCBPP3-201ENST00000419629 PRRC2CQ9Y520 2896 aaKnown RBP1.62□□□□□ -2.15
SDCBPP3-201ENST00000419629 RYR1P21817 5038 aa1.62□□□□□ -2.15
SDCBPP3-201ENST00000419629 MGAM2Q2M2H8 2515 aa1.62□□□□□ -2.15
SDCBPP3-201ENST00000419629 PCLOQ9Y6V0 5065 aa1.62□□□□□ -2.15
SDCBPP3-201ENST00000419629 MAP1AP78559 2803 aaPredicted RBP1.62□□□□□ -2.15
SDCBPP3-201ENST00000419629 A0A0D9SG42 100 aa1.62□□□□□ -2.15
SDCBPP3-201ENST00000419629 PRO2289Q9P1D8 64 aa1.62□□□□□ -2.15
SDCBPP3-201ENST00000419629 EPPK1P58107 5090 aaKnown RBP1.62□□□□□ -2.15
SDCBPP3-201ENST00000419629 VPS13CQ709C8 3753 aa1.62□□□□□ -2.15
SDCBPP3-201ENST00000419629 RPS29P62273 56 aaKnown RBP1.61□□□□□ -2.15
SDCBPP3-201ENST00000419629 Q6ZRN7 208 aaPredicted RBP1.6□□□□□ -2.15
SDCBPP3-201ENST00000419629 FLG2Q5D862 2391 aaPredicted RBP1.6□□□□□ -2.15
SDCBPP3-201ENST00000419629 PRKDCP78527 4128 aaKnown RBP1.59□□□□□ -2.15
SDCBPP3-201ENST00000419629 HYDINQ4G0P3 5121 aa1.59□□□□□ -2.15
SDCBPP3-201ENST00000419629 SVEP1Q4LDE5 3571 aa1.59□□□□□ -2.16
SDCBPP3-201ENST00000419629 M0QZ58 72 aa1.58□□□□□ -2.16
SDCBPP3-201ENST00000419629 KRTAP12-1P59990 96 aa1.58□□□□□ -2.16
SDCBPP3-201ENST00000419629 KRTAP13-4Q3LI77 160 aa1.58□□□□□ -2.16
SDCBPP3-201ENST00000419629 SONP18583 2426 aaKnown RBP1.58□□□□□ -2.16
SDCBPP3-201ENST00000419629 TRRAPQ9Y4A5 3859 aa1.58□□□□□ -2.16
SDCBPP3-201ENST00000419629 HRNRQ86YZ3 2850 aaPredicted RBP1.57□□□□□ -2.16
SDCBPP3-201ENST00000419629 ANK3Q12955 4377 aaKnown RBP1.57□□□□□ -2.16
SDCBPP3-201ENST00000419629 INE1O15225 51 aa1.57□□□□□ -2.16
SDCBPP3-201ENST00000419629 HERC2O95714 4834 aa1.57□□□□□ -2.16
SDCBPP3-201ENST00000419629 VPS13DQ5THJ4 4388 aa1.57□□□□□ -2.16
SDCBPP3-201ENST00000419629 CRCT1Q9UGL9 99 aa1.56□□□□□ -2.16
SDCBPP3-201ENST00000419629 ZANQ9Y493 2812 aa1.56□□□□□ -2.16
SDCBPP3-201ENST00000419629 RYR2Q92736 4967 aa1.55□□□□□ -2.16
SDCBPP3-201ENST00000419629 TENM1Q9UKZ4 2725 aa1.55□□□□□ -2.16
SDCBPP3-201ENST00000419629 TENM2Q9NT68 2774 aa1.54□□□□□ -2.16
SDCBPP3-201ENST00000419629 DNAH8Q96JB1 4490 aa1.54□□□□□ -2.16
SDCBPP3-201ENST00000419629 VWFP04275 2813 aa1.53□□□□□ -2.16
SDCBPP3-201ENST00000419629 KRTAP4-1Q9BYQ7 146 aa1.52□□□□□ -2.17
SDCBPP3-201ENST00000419629 R4GN34 69 aa1.52□□□□□ -2.17
SDCBPP3-201ENST00000419629 UBR4Q5T4S7 5183 aa1.52□□□□□ -2.17
SDCBPP3-201ENST00000419629 CMYA5Q8N3K9 4069 aa1.52□□□□□ -2.17
SDCBPP3-201ENST00000419629 SACSQ9NZJ4 4579 aa1.51□□□□□ -2.17
SDCBPP3-201ENST00000419629 SMR3AQ99954 134 aa1.51□□□□□ -2.17
SDCBPP3-201ENST00000419629 DNAH10Q8IVF4 4471 aa1.5□□□□□ -2.17
SDCBPP3-201ENST00000419629 DYNC2H1Q8NCM8 4307 aaKnown RBP1.49□□□□□ -2.17
SDCBPP3-201ENST00000419629 C9orf92A6NGG3 77 aa1.49□□□□□ -2.17
SDCBPP3-201ENST00000419629 TENM3Q9P273 2699 aa1.49□□□□□ -2.17
SDCBPP3-201ENST00000419629 COL7A1Q02388 2944 aa1.49□□□□□ -2.17
SDCBPP3-201ENST00000419629 DNAH17Q9UFH2 4485 aa1.48□□□□□ -2.17
SDCBPP3-201ENST00000419629 KRTAP12-4P60329 112 aa1.48□□□□□ -2.17
SDCBPP3-201ENST00000419629 LYSTQ99698 3801 aa1.48□□□□□ -2.17
SDCBPP3-201ENST00000419629 ABCA13Q86UQ4 5058 aa1.46□□□□□ -2.17
SDCBPP3-201ENST00000419629 DNAH2Q9P225 4427 aa1.46□□□□□ -2.18
SDCBPP3-201ENST00000419629 HUWE1Q7Z6Z7 4374 aaKnown RBP1.46□□□□□ -2.18
SDCBPP3-201ENST00000419629 KRTAP12-3P60328 96 aa1.46□□□□□ -2.18
SDCBPP3-201ENST00000419629 Q5VSD8 79 aa1.46□□□□□ -2.18
SDCBPP3-201ENST00000419629 KIAA1109Q2LD37 5005 aa1.46□□□□□ -2.18
SDCBPP3-201ENST00000419629 HERC1Q15751 4861 aa1.46□□□□□ -2.18
SDCBPP3-201ENST00000419629 HECTD4Q9Y4D8 3996 aa1.45□□□□□ -2.18
SDCBPP3-201ENST00000419629 DNAH11Q96DT5 4516 aa1.44□□□□□ -2.18
SDCBPP3-201ENST00000419629 FRAS1Q86XX4 4008 aa1.43□□□□□ -2.18
SDCBPP3-201ENST00000419629 DNAH3Q8TD57 4116 aa1.43□□□□□ -2.18
SDCBPP3-201ENST00000419629 DNAH9Q9NYC9 4486 aa1.43□□□□□ -2.18
SDCBPP3-201ENST00000419629 STAB2Q8WWQ8 2551 aa1.43□□□□□ -2.18
SDCBPP3-201ENST00000419629 CSMD3Q7Z407 3707 aa1.42□□□□□ -2.18
SDCBPP3-201ENST00000419629 DNAH7Q8WXX0 4024 aa1.42□□□□□ -2.18
SDCBPP3-201ENST00000419629 TNP1P09430 55 aa1.41□□□□□ -2.18
SDCBPP3-201ENST00000419629 DMBT1Q9UGM3 2413 aaPredicted RBP1.4□□□□□ -2.18
SDCBPP3-201ENST00000419629 STARD9Q9P2P6 4700 aa1.39□□□□□ -2.19
SDCBPP3-201ENST00000419629 DNAH6Q9C0G6 4158 aa1.39□□□□□ -2.19
SDCBPP3-201ENST00000419629 PKHD1L1Q86WI1 4243 aa1.39□□□□□ -2.19
SDCBPP3-201ENST00000419629 PLECQ15149 4684 aaKnown RBP1.38□□□□□ -2.19
SDCBPP3-201ENST00000419629 SRRM2Q9UQ35 2752 aaKnown RBP1.38□□□□□ -2.19
SDCBPP3-201ENST00000419629 FCGBPQ9Y6R7 5405 aaPredicted RBP1.37□□□□□ -2.19
SDCBPP3-201ENST00000419629 MYCBP2O75592 4640 aa1.37□□□□□ -2.19
SDCBPP3-201ENST00000419629 APOBP04114 4563 aaKnown RBP1.36□□□□□ -2.19
SDCBPP3-201ENST00000419629 KRTAP6-3Q3LI67 103 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms