RNA–Protein interactions for RNA: ENST00000417641.6

VRK2-203, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK2, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-203ENST00000417641 DNHD1Q96M86 4753 aa4.15□□□□□ -1.75
VRK2-203ENST00000417641 C9orf92A6NGG3 77 aa4.13□□□□□ -1.75
VRK2-203ENST00000417641 HYDINQ4G0P3 5121 aa4.12□□□□□ -1.75
VRK2-203ENST00000417641 K7ERS5 55 aa4.12□□□□□ -1.75
VRK2-203ENST00000417641 KRTAP10-6P60371 365 aaPredicted RBP4.12□□□□□ -1.75
VRK2-203ENST00000417641 TPRXLQ17RH7 258 aa4.09□□□□□ -1.75
VRK2-203ENST00000417641 KRTAP13-4Q3LI77 160 aa4.09□□□□□ -1.75
VRK2-203ENST00000417641 FLG2Q5D862 2391 aaPredicted RBP4.09□□□□□ -1.76
VRK2-203ENST00000417641 A0A0A0MQY5 61 aa4.09□□□□□ -1.76
VRK2-203ENST00000417641 RPL37P61927 97 aaKnown RBP4.08□□□□□ -1.76
VRK2-203ENST00000417641 LCE3BQ5TA77 95 aa4.07□□□□□ -1.76
VRK2-203ENST00000417641 KRTAP9-9Q9BYP9 154 aa4.06□□□□□ -1.76
VRK2-203ENST00000417641 KRTAP9-4Q9BYQ2 154 aa4.06□□□□□ -1.76
VRK2-203ENST00000417641 APOBP04114 4563 aaKnown RBP4.06□□□□□ -1.76
VRK2-203ENST00000417641 PKHD1P08F94 4074 aa4.05□□□□□ -1.76
VRK2-203ENST00000417641 KRTAP10-4P60372 401 aaPredicted RBP4.04□□□□□ -1.76
VRK2-203ENST00000417641 DYNC1H1Q14204 4646 aaKnown RBP4.03□□□□□ -1.76
VRK2-203ENST00000417641 KRTAP4-8A0A0G2JLE6 195 aa4.03□□□□□ -1.76
VRK2-203ENST00000417641 KRTAP21-3Q3LHN1 58 aa4.03□□□□□ -1.76
VRK2-203ENST00000417641 KRTAP15-1Q3LI76 137 aa4.02□□□□□ -1.77
VRK2-203ENST00000417641 KRTAP4-12Q9BQ66 201 aa4□□□□□ -1.77
VRK2-203ENST00000417641 C10orf95Q9H7T3 257 aa4□□□□□ -1.77
VRK2-203ENST00000417641 A0A0D9SG42 100 aa3.99□□□□□ -1.77
VRK2-203ENST00000417641 FAT1Q14517 4588 aa3.99□□□□□ -1.77
VRK2-203ENST00000417641 FAT3Q8TDW7 4589 aa3.98□□□□□ -1.77
VRK2-203ENST00000417641 SMR3BP02814 79 aaPredicted RBP3.98□□□□□ -1.77
VRK2-203ENST00000417641 SPINT4Q6UDR6 99 aa3.98□□□□□ -1.77
VRK2-203ENST00000417641 LRP1Q07954 4544 aaKnown RBP3.97□□□□□ -1.77
VRK2-203ENST00000417641 S4R3F8 94 aa3.97□□□□□ -1.77
VRK2-203ENST00000417641 KRTAP10-8P60410 259 aa3.96□□□□□ -1.78
VRK2-203ENST00000417641 KRTAP12-2P59991 146 aa3.96□□□□□ -1.78
VRK2-203ENST00000417641 TNXBP22105 4242 aa3.94□□□□□ -1.78
VRK2-203ENST00000417641 KRTAP12-1P59990 96 aa3.93□□□□□ -1.78
VRK2-203ENST00000417641 NDUFAF8A1L188 74 aa3.92□□□□□ -1.78
VRK2-203ENST00000417641 A0A1B0GVY2 172 aa3.91□□□□□ -1.78
VRK2-203ENST00000417641 HSPG2P98160 4391 aa3.91□□□□□ -1.78
VRK2-203ENST00000417641 KRTAP4-7Q9BYR0 210 aa3.9□□□□□ -1.79
VRK2-203ENST00000417641 KRTAP19-1Q8IUB9 90 aa3.85□□□□□ -1.79
VRK2-203ENST00000417641 DMBT1Q9UGM3 2413 aaPredicted RBP3.85□□□□□ -1.79
VRK2-203ENST00000417641 M0QZ58 72 aa3.83□□□□□ -1.8
VRK2-203ENST00000417641 KRTAP17-1Q9BYP8 105 aa3.81□□□□□ -1.8
VRK2-203ENST00000417641 MYCBP2O75592 4640 aa3.8□□□□□ -1.8
VRK2-203ENST00000417641 LCE1DQ5T752 114 aa3.79□□□□□ -1.8
VRK2-203ENST00000417641 KRTAP4-2Q9BYR5 136 aa3.77□□□□□ -1.81
VRK2-203ENST00000417641 RYR2Q92736 4967 aa3.77□□□□□ -1.81
VRK2-203ENST00000417641 KRTAP4-9Q9BYQ8 210 aa3.74□□□□□ -1.81
VRK2-203ENST00000417641 LPAP08519 4548 aa3.73□□□□□ -1.81
VRK2-203ENST00000417641 KMT2CQ8NEZ4 4911 aaKnown RBP3.7□□□□□ -1.82
VRK2-203ENST00000417641 MT1HL1P0DM35 61 aa3.69□□□□□ -1.82
VRK2-203ENST00000417641 KRTAP19-4Q3LI73 84 aa3.69□□□□□ -1.82
VRK2-203ENST00000417641 PLAC4Q8WY50 150 aa3.69□□□□□ -1.82
VRK2-203ENST00000417641 Q5VSD8 79 aa3.68□□□□□ -1.82
VRK2-203ENST00000417641 RYR1P21817 5038 aa3.68□□□□□ -1.82
VRK2-203ENST00000417641 LRP2P98164 4655 aa3.66□□□□□ -1.82
VRK2-203ENST00000417641 KRTAP23-1A1A580 65 aa3.65□□□□□ -1.83
VRK2-203ENST00000417641 R4GN34 69 aa3.64□□□□□ -1.83
VRK2-203ENST00000417641 LUZP6Q538Z0 58 aa3.63□□□□□ -1.83
VRK2-203ENST00000417641 RYR3Q15413 4870 aa3.63□□□□□ -1.83
VRK2-203ENST00000417641 KRTAP5-3Q6L8H2 238 aa3.6□□□□□ -1.83
VRK2-203ENST00000417641 PP632Q6XCG6 107 aa3.58□□□□□ -1.84
VRK2-203ENST00000417641 SEC61BP60468 96 aaKnown RBP3.58□□□□□ -1.84
VRK2-203ENST00000417641 MUC17Q685J3 4493 aa3.56□□□□□ -1.84
VRK2-203ENST00000417641 KRTAP4-11Q9BYQ6 195 aa3.56□□□□□ -1.84
VRK2-203ENST00000417641 KRTAP4-5Q9BYR2 181 aa3.55□□□□□ -1.84
VRK2-203ENST00000417641 KRTAP19-2Q3LHN2 52 aa3.53□□□□□ -1.84
VRK2-203ENST00000417641 KRTAP9-8Q9BYQ0 159 aa3.52□□□□□ -1.85
VRK2-203ENST00000417641 KIAA1109Q2LD37 5005 aa3.52□□□□□ -1.85
VRK2-203ENST00000417641 KRTAP4-1Q9BYQ7 146 aa3.51□□□□□ -1.85
VRK2-203ENST00000417641 EPPK1P58107 5090 aaKnown RBP3.51□□□□□ -1.85
VRK2-203ENST00000417641 SPRR5A0A1B0GTR4 108 aa3.49□□□□□ -1.85
VRK2-203ENST00000417641 ABCA13Q86UQ4 5058 aa3.47□□□□□ -1.85
VRK2-203ENST00000417641 CAMK2N1Q7Z7J9 78 aa3.46□□□□□ -1.86
VRK2-203ENST00000417641 HERC1Q15751 4861 aa3.45□□□□□ -1.86
VRK2-203ENST00000417641 LCE4AQ5TA78 99 aa3.42□□□□□ -1.86
VRK2-203ENST00000417641 TNP1P09430 55 aa3.39□□□□□ -1.87
VRK2-203ENST00000417641 BIRC6Q9NR09 4857 aa3.39□□□□□ -1.87
VRK2-203ENST00000417641 FLGP20930 4061 aaPredicted RBP3.33□□□□□ -1.88
VRK2-203ENST00000417641 PCLOQ9Y6V0 5065 aa3.3□□□□□ -1.88
VRK2-203ENST00000417641 KRTAP9-7A8MTY7 169 aa3.27□□□□□ -1.89
VRK2-203ENST00000417641 HERC2O95714 4834 aa3.27□□□□□ -1.89
VRK2-203ENST00000417641 LCE5AQ5TCM9 118 aa3.26□□□□□ -1.89
VRK2-203ENST00000417641 SPRR2GQ9BYE4 73 aa3.25□□□□□ -1.89
VRK2-203ENST00000417641 LCE3AQ5TA76 89 aa3.23□□□□□ -1.89
VRK2-203ENST00000417641 PRO2289Q9P1D8 64 aa3.23□□□□□ -1.89
VRK2-203ENST00000417641 MUC2Q02817 5179 aa3.18□□□□□ -1.9
VRK2-203ENST00000417641 KRTAP8-1Q8IUC2 63 aa3.18□□□□□ -1.9
VRK2-203ENST00000417641 INE1O15225 51 aa3.17□□□□□ -1.9
VRK2-203ENST00000417641 KRTAP9-3Q9BYQ3 159 aa3.15□□□□□ -1.9
VRK2-203ENST00000417641 KRTAP19-8Q3LI54 63 aa3.1□□□□□ -1.91
VRK2-203ENST00000417641 HMCN2Q8NDA2 5059 aa3.08□□□□□ -1.92
VRK2-203ENST00000417641 MT1FP04733 61 aa3.08□□□□□ -1.92
VRK2-203ENST00000417641 FAT4Q6V0I7 4981 aa3.08□□□□□ -1.92
VRK2-203ENST00000417641 KRTAP10-12P60413 245 aa3.08□□□□□ -1.92
VRK2-203ENST00000417641 MT2AP02795 61 aa3.07□□□□□ -1.92
VRK2-203ENST00000417641 KRTAP10-5P60370 271 aa3.07□□□□□ -1.92
VRK2-203ENST00000417641 MT1HP80294 61 aa3.06□□□□□ -1.92
VRK2-203ENST00000417641 MT1XP80297 61 aa3.06□□□□□ -1.92
VRK2-203ENST00000417641 KRTAP12-3P60328 96 aa3.05□□□□□ -1.92
VRK2-203ENST00000417641 MT1BP07438 61 aa3.04□□□□□ -1.92
VRK2-203ENST00000417641 UBR4Q5T4S7 5183 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms