RNA–Protein interactions for RNA: ENST00000415609.6

UBA3-203, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 5 BASIC

Gene UBA3, Length 2,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-203ENST00000415609 KTN1-AS1Q86SY8 53 aa6.5□□□□□ -1.37
UBA3-203ENST00000415609 RYR1P21817 5038 aa6.49□□□□□ -1.37
UBA3-203ENST00000415609 RPL37P61927 97 aaKnown RBP6.49□□□□□ -1.37
UBA3-203ENST00000415609 XP32Q5T750 250 aa6.47□□□□□ -1.37
UBA3-203ENST00000415609 DMBT1Q9UGM3 2413 aaPredicted RBP6.46□□□□□ -1.37
UBA3-203ENST00000415609 J3QL48 77 aa6.45□□□□□ -1.38
UBA3-203ENST00000415609 MT1HL1P0DM35 61 aa6.45□□□□□ -1.38
UBA3-203ENST00000415609 KIAA1109Q2LD37 5005 aa6.42□□□□□ -1.38
UBA3-203ENST00000415609 MYCBP2O75592 4640 aa6.39□□□□□ -1.39
UBA3-203ENST00000415609 A0A1B0GU33 70 aa6.36□□□□□ -1.39
UBA3-203ENST00000415609 H0YAA0 97 aa6.35□□□□□ -1.39
UBA3-203ENST00000415609 H1FX-AS1Q4G0G2 97 aa6.35□□□□□ -1.39
UBA3-203ENST00000415609 HERC2O95714 4834 aa6.32□□□□□ -1.4
UBA3-203ENST00000415609 S4R3F8 94 aa6.3□□□□□ -1.4
UBA3-203ENST00000415609 TPRXLQ17RH7 258 aa6.29□□□□□ -1.4
UBA3-203ENST00000415609 RBM12B-AS1Q9P1G2 102 aa6.28□□□□□ -1.4
UBA3-203ENST00000415609 PRAC1Q96KF2 57 aa6.26□□□□□ -1.41
UBA3-203ENST00000415609 ADM2Q7Z4H4 148 aa6.25□□□□□ -1.41
UBA3-203ENST00000415609 KRTAP4-5Q9BYR2 181 aa6.25□□□□□ -1.41
UBA3-203ENST00000415609 KRTAP10-6P60371 365 aaPredicted RBP6.2□□□□□ -1.42
UBA3-203ENST00000415609 LCE2BO14633 110 aa6.19□□□□□ -1.42
UBA3-203ENST00000415609 LRP2P98164 4655 aa6.16□□□□□ -1.42
UBA3-203ENST00000415609 PCLOQ9Y6V0 5065 aa6.16□□□□□ -1.42
UBA3-203ENST00000415609 LPAP08519 4548 aa6.15□□□□□ -1.43
UBA3-203ENST00000415609 K7ERS5 55 aa6.15□□□□□ -1.43
UBA3-203ENST00000415609 ABCA13Q86UQ4 5058 aa6.13□□□□□ -1.43
UBA3-203ENST00000415609 KRTAP13-4Q3LI77 160 aa6.12□□□□□ -1.43
UBA3-203ENST00000415609 P0C880 135 aa6.11□□□□□ -1.43
UBA3-203ENST00000415609 A0A0D9SG42 100 aa6.09□□□□□ -1.43
UBA3-203ENST00000415609 CSAG1Q6PB30 78 aa6.09□□□□□ -1.43
UBA3-203ENST00000415609 SEC61BP60468 96 aaKnown RBP6.07□□□□□ -1.44
UBA3-203ENST00000415609 LINC01554Q52M75 96 aa5.99□□□□□ -1.45
UBA3-203ENST00000415609 ROMO1P60602 79 aa5.96□□□□□ -1.46
UBA3-203ENST00000415609 KRTAP25-1Q3LHN0 102 aa5.95□□□□□ -1.46
UBA3-203ENST00000415609 KRTAP4-1Q9BYQ7 146 aa5.95□□□□□ -1.46
UBA3-203ENST00000415609 M0QZ58 72 aa5.93□□□□□ -1.46
UBA3-203ENST00000415609 MUC17Q685J3 4493 aa5.92□□□□□ -1.46
UBA3-203ENST00000415609 KRTAP12-2P59991 146 aa5.92□□□□□ -1.46
UBA3-203ENST00000415609 LCE2CQ5TA81 110 aa5.92□□□□□ -1.46
UBA3-203ENST00000415609 CRIPTQ9P021 101 aa5.92□□□□□ -1.46
UBA3-203ENST00000415609 SPINT4Q6UDR6 99 aa5.91□□□□□ -1.46
UBA3-203ENST00000415609 KRTAP12-1P59990 96 aa5.89□□□□□ -1.47
UBA3-203ENST00000415609 R4GN34 69 aa5.84□□□□□ -1.48
UBA3-203ENST00000415609 HERC1Q15751 4861 aa5.82□□□□□ -1.48
UBA3-203ENST00000415609 KRTAP19-2Q3LHN2 52 aa5.81□□□□□ -1.48
UBA3-203ENST00000415609 LCE2AQ5TA79 106 aaPredicted RBP5.79□□□□□ -1.48
UBA3-203ENST00000415609 LORP23490 312 aaPredicted RBP5.76□□□□□ -1.49
UBA3-203ENST00000415609 KRTAP4-8Q9BYQ9 185 aa5.73□□□□□ -1.49
UBA3-203ENST00000415609 C10orf95Q9H7T3 257 aa5.73□□□□□ -1.49
UBA3-203ENST00000415609 MUC2Q02817 5179 aa5.68□□□□□ -1.5
UBA3-203ENST00000415609 HMCN2Q8NDA2 5059 aa5.67□□□□□ -1.5
UBA3-203ENST00000415609 FLGP20930 4061 aaPredicted RBP5.62□□□□□ -1.51
UBA3-203ENST00000415609 KRTAP9-2Q9BYQ4 174 aa5.57□□□□□ -1.52
UBA3-203ENST00000415609 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.56□□□□□ -1.52
UBA3-203ENST00000415609 UBR4Q5T4S7 5183 aa5.54□□□□□ -1.52
UBA3-203ENST00000415609 KRTAP9-6A0A140TA67 174 aa5.53□□□□□ -1.52
UBA3-203ENST00000415609 CAMK2N1Q7Z7J9 78 aa5.53□□□□□ -1.52
UBA3-203ENST00000415609 M0R2T5 61 aa5.45□□□□□ -1.54
UBA3-203ENST00000415609 LCE3BQ5TA77 95 aa5.43□□□□□ -1.54
UBA3-203ENST00000415609 RNF213Q63HN8 5207 aa5.42□□□□□ -1.54
UBA3-203ENST00000415609 FAT4Q6V0I7 4981 aa5.41□□□□□ -1.54
UBA3-203ENST00000415609 MT1HP80294 61 aa5.41□□□□□ -1.54
UBA3-203ENST00000415609 KRTAP4-8A0A0G2JLE6 195 aa5.38□□□□□ -1.55
UBA3-203ENST00000415609 KRTAP15-1Q3LI76 137 aa5.37□□□□□ -1.55
UBA3-203ENST00000415609 SPRR2GQ9BYE4 73 aa5.35□□□□□ -1.55
UBA3-203ENST00000415609 PP632Q6XCG6 107 aa5.33□□□□□ -1.56
UBA3-203ENST00000415609 KRTAP19-1Q8IUB9 90 aa5.32□□□□□ -1.56
UBA3-203ENST00000415609 PLAC4Q8WY50 150 aa5.31□□□□□ -1.56
UBA3-203ENST00000415609 MT2AP02795 61 aa5.3□□□□□ -1.56
UBA3-203ENST00000415609 TNP1P09430 55 aa5.3□□□□□ -1.56
UBA3-203ENST00000415609 KRTAP10-10P60014 251 aa5.3□□□□□ -1.56
UBA3-203ENST00000415609 MT1FP04733 61 aa5.29□□□□□ -1.56
UBA3-203ENST00000415609 KRTAP9-9Q9BYP9 154 aa5.27□□□□□ -1.57
UBA3-203ENST00000415609 KRTAP9-4Q9BYQ2 154 aa5.27□□□□□ -1.57
UBA3-203ENST00000415609 KRTAP9-8Q9BYQ0 159 aa5.25□□□□□ -1.57
UBA3-203ENST00000415609 KRTAP4-7Q9BYR0 210 aa5.25□□□□□ -1.57
UBA3-203ENST00000415609 H3BS24 57 aa5.24□□□□□ -1.57
UBA3-203ENST00000415609 KRTAP4-12Q9BQ66 201 aa5.23□□□□□ -1.57
UBA3-203ENST00000415609 NDUFAF8A1L188 74 aa5.19□□□□□ -1.58
UBA3-203ENST00000415609 KRTAP23-1A1A580 65 aa5.17□□□□□ -1.58
UBA3-203ENST00000415609 KRTAP19-8Q3LI54 63 aa5.13□□□□□ -1.59
UBA3-203ENST00000415609 LCE1DQ5T752 114 aa5.1□□□□□ -1.59
UBA3-203ENST00000415609 MT1BP07438 61 aa5.07□□□□□ -1.6
UBA3-203ENST00000415609 KRTAP9-3Q9BYQ3 159 aa5.04□□□□□ -1.6
UBA3-203ENST00000415609 LCE3AQ5TA76 89 aa5.02□□□□□ -1.61
UBA3-203ENST00000415609 KRTAP10-5P60370 271 aa5.01□□□□□ -1.61
UBA3-203ENST00000415609 KRTAP4-9Q9BYQ8 210 aa5.01□□□□□ -1.61
UBA3-203ENST00000415609 MT1XP80297 61 aa5.01□□□□□ -1.61
UBA3-203ENST00000415609 LUZP6Q538Z0 58 aa4.97□□□□□ -1.61
UBA3-203ENST00000415609 KRTAP4-2Q9BYR5 136 aa4.97□□□□□ -1.61
UBA3-203ENST00000415609 KRTAP10-12P60413 245 aa4.89□□□□□ -1.63
UBA3-203ENST00000415609 KRTAP8-1Q8IUC2 63 aa4.89□□□□□ -1.63
UBA3-203ENST00000415609 PRO2289Q9P1D8 64 aa4.89□□□□□ -1.63
UBA3-203ENST00000415609 SPRR5A0A1B0GTR4 108 aa4.88□□□□□ -1.63
UBA3-203ENST00000415609 KRTAP5-3Q6L8H2 238 aa4.87□□□□□ -1.63
UBA3-203ENST00000415609 KRTAP10-7P60409 375 aaPredicted RBP4.86□□□□□ -1.63
UBA3-203ENST00000415609 KRTAP12-3P60328 96 aa4.79□□□□□ -1.64
UBA3-203ENST00000415609 KRTAP4-11Q9BYQ6 195 aa4.72□□□□□ -1.65
UBA3-203ENST00000415609 CRCT1Q9UGL9 99 aa4.7□□□□□ -1.66
UBA3-203ENST00000415609 USH2AO75445 5202 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms