RNA–Protein interactions for RNA: ENST00000415609.6

UBA3-203, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 5 BASIC

Gene UBA3, Length 2,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-203ENST00000415609 NISCHQ9Y2I1 1504 aa26.38■■□□□ 1.81
UBA3-203ENST00000415609 CCDC180Q9P1Z9 1646 aa22.65■■□□□ 1.22
UBA3-203ENST00000415609 ZCCHC6Q5VYS8 1495 aaKnown RBP22.28■■□□□ 1.16
UBA3-203ENST00000415609 SHROOM4Q9ULL8 1493 aa22.19■■□□□ 1.14
UBA3-203ENST00000415609 DCAF8L2P0C7V8 631 aa21.82■■□□□ 1.08
UBA3-203ENST00000415609 DCAF1Q9Y4B6 1507 aa21.7■■□□□ 1.07
UBA3-203ENST00000415609 SUPT5HO00267 1087 aaKnown RBP21.63■■□□□ 1.05
UBA3-203ENST00000415609 MYO15BQ96JP2 1530 aa21.18■□□□□ 0.98
UBA3-203ENST00000415609 SCRIBQ14160 1630 aa21.09■□□□□ 0.97
UBA3-203ENST00000415609 ABCC9O60706 1549 aa21.06■□□□□ 0.96
UBA3-203ENST00000415609 NACADO15069 1562 aa20.96■□□□□ 0.95
UBA3-203ENST00000415609 CHIC1Q5VXU3 224 aa20.94■□□□□ 0.94
UBA3-203ENST00000415609 RSF1Q96T23 1441 aaPredicted RBP20.74■□□□□ 0.91
UBA3-203ENST00000415609 RB1CC1Q8TDY2 1594 aa20.67■□□□□ 0.9
UBA3-203ENST00000415609 CECR2Q9BXF3 1484 aa20.53■□□□□ 0.88
UBA3-203ENST00000415609 MROH2BQ7Z745 1585 aa20.46■□□□□ 0.87
UBA3-203ENST00000415609 WIZO95785 1651 aa20.35■□□□□ 0.85
UBA3-203ENST00000415609 UNC13AQ9UPW8 1703 aa20.33■□□□□ 0.85
UBA3-203ENST00000415609 BAZ1AQ9NRL2 1556 aaPredicted RBP20.32■□□□□ 0.84
UBA3-203ENST00000415609 LOC105371045A0A1W2PR82 267 aa20.25■□□□□ 0.83
UBA3-203ENST00000415609 TRIM41Q8WV44 630 aa20.22■□□□□ 0.83
UBA3-203ENST00000415609 SMARCA4P51532 1647 aa20.17■□□□□ 0.82
UBA3-203ENST00000415609 TOP2AP11388 1531 aaKnown RBP20.08■□□□□ 0.81
UBA3-203ENST00000415609 BICRAQ9NZM4 1560 aa20.06■□□□□ 0.8
UBA3-203ENST00000415609 PABPN1Q86U42 306 aaKnown RBP eCLIP20.03■□□□□ 0.8
UBA3-203ENST00000415609 EIF4G1Q04637 1599 aaKnown RBP20.01■□□□□ 0.79
UBA3-203ENST00000415609 PCGF6Q9BYE7 350 aa20■□□□□ 0.79
UBA3-203ENST00000415609 FAM9AQ8IZU1 332 aaPredicted RBP19.99■□□□□ 0.79
UBA3-203ENST00000415609 SMARCA2P51531 1590 aa19.94■□□□□ 0.78
UBA3-203ENST00000415609 CCDC88BA6NC98 1476 aa19.93■□□□□ 0.78
UBA3-203ENST00000415609 HRCP23327 699 aa19.86■□□□□ 0.77
UBA3-203ENST00000415609 PEG3Q9GZU2 1588 aa19.81■□□□□ 0.76
UBA3-203ENST00000415609 ABCC8Q09428 1581 aa19.79■□□□□ 0.76
UBA3-203ENST00000415609 EHMT2Q96KQ7 1210 aa19.79■□□□□ 0.76
UBA3-203ENST00000415609 TRIM26Q12899 539 aaPredicted RBP19.74■□□□□ 0.75
UBA3-203ENST00000415609 ATAD2BQ9ULI0 1458 aa19.67■□□□□ 0.74
UBA3-203ENST00000415609 BAZ1BQ9UIG0 1483 aaKnown RBP19.64■□□□□ 0.73
UBA3-203ENST00000415609 SOGA1O94964 1423 aa19.53■□□□□ 0.72
UBA3-203ENST00000415609 WRNQ14191 1432 aaPredicted RBP eCLIP19.51■□□□□ 0.71
UBA3-203ENST00000415609 EEA1Q15075 1411 aa19.49■□□□□ 0.71
UBA3-203ENST00000415609 SYNJ1O43426 1573 aa19.43■□□□□ 0.7
UBA3-203ENST00000415609 RUSC2Q8N2Y8 1516 aa19.43■□□□□ 0.7
UBA3-203ENST00000415609 PPARGC1BQ86YN6 1023 aaKnown RBP19.42■□□□□ 0.7
UBA3-203ENST00000415609 CSRNP3Q8WYN3 585 aa19.4■□□□□ 0.7
UBA3-203ENST00000415609 HMGXB3Q12766 1538 aa19.38■□□□□ 0.69
UBA3-203ENST00000415609 CEP162Q5TB80 1403 aa19.36■□□□□ 0.69
UBA3-203ENST00000415609 TNIKQ9UKE5 1360 aa19.35■□□□□ 0.69
UBA3-203ENST00000415609 NCAPD3P42695 1498 aa19.35■□□□□ 0.69
UBA3-203ENST00000415609 GOLGA3Q08378 1498 aa19.32■□□□□ 0.68
UBA3-203ENST00000415609 UBTFP17480 764 aaKnown RBP19.3■□□□□ 0.68
UBA3-203ENST00000415609 TOP2BQ02880 1626 aa19.25■□□□□ 0.67
UBA3-203ENST00000415609 CEP164Q9UPV0 1460 aa19.24■□□□□ 0.67
UBA3-203ENST00000415609 KIF21BO75037 1637 aa19.24■□□□□ 0.67
UBA3-203ENST00000415609 ZEB1P37275 1124 aaPredicted RBP19.23■□□□□ 0.67
UBA3-203ENST00000415609 BIVM-ERCC5R4GMW8 1640 aa19.2■□□□□ 0.66
UBA3-203ENST00000415609 CFTRP13569 1480 aa19.12■□□□□ 0.65
UBA3-203ENST00000415609 TTBK1Q5TCY1 1321 aaPredicted RBP19.1■□□□□ 0.65
UBA3-203ENST00000415609 CUX1P39880 1505 aa19.09■□□□□ 0.65
UBA3-203ENST00000415609 RAPGEF2Q9Y4G8 1499 aa19.09■□□□□ 0.65
UBA3-203ENST00000415609 CLIP1P30622 1438 aa19.06■□□□□ 0.64
UBA3-203ENST00000415609 PRDM2Q13029 1718 aa19.05■□□□□ 0.64
UBA3-203ENST00000415609 CC2D2AQ9P2K1 1620 aa19■□□□□ 0.63
UBA3-203ENST00000415609 ERICH3Q5RHP9 1530 aa18.98■□□□□ 0.63
UBA3-203ENST00000415609 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.95■□□□□ 0.62
UBA3-203ENST00000415609 KIF27Q86VH2 1401 aa18.95■□□□□ 0.62
UBA3-203ENST00000415609 VPS8Q8N3P4 1428 aa18.95■□□□□ 0.62
UBA3-203ENST00000415609 PRXQ9BXM0 1461 aa18.95■□□□□ 0.62
UBA3-203ENST00000415609 CADPSQ9ULU8 1353 aa18.95■□□□□ 0.62
UBA3-203ENST00000415609 RANGAP1P46060 587 aaPredicted RBP18.93■□□□□ 0.62
UBA3-203ENST00000415609 CCER1Q8TC90 406 aaPredicted RBP18.93■□□□□ 0.62
UBA3-203ENST00000415609 APLP2Q06481 763 aa18.85■□□□□ 0.61
UBA3-203ENST00000415609 CUX2O14529 1486 aa18.8■□□□□ 0.6
UBA3-203ENST00000415609 FGD5Q6ZNL6 1462 aa18.79■□□□□ 0.6
UBA3-203ENST00000415609 ARAP1Q96P48 1450 aa18.78■□□□□ 0.6
UBA3-203ENST00000415609 FANCD2Q9BXW9 1451 aa18.78■□□□□ 0.6
UBA3-203ENST00000415609 IGF1RP08069 1367 aa18.71■□□□□ 0.59
UBA3-203ENST00000415609 HNRNPUL2Q1KMD3 747 aaKnown RBP18.69■□□□□ 0.58
UBA3-203ENST00000415609 DNMBPQ6XZF7 1577 aa18.69■□□□□ 0.58
UBA3-203ENST00000415609 NESP48681 1621 aa18.68■□□□□ 0.58
UBA3-203ENST00000415609 ARHGAP35Q9NRY4 1499 aa18.66■□□□□ 0.58
UBA3-203ENST00000415609 CARMIL1Q5VZK9 1371 aa18.65■□□□□ 0.58
UBA3-203ENST00000415609 TOPBP1Q92547 1522 aa18.63■□□□□ 0.57
UBA3-203ENST00000415609 LAMC3Q9Y6N6 1575 aa18.6■□□□□ 0.57
UBA3-203ENST00000415609 POLA1P09884 1462 aaPredicted RBP18.6■□□□□ 0.57
UBA3-203ENST00000415609 RAD54L2Q9Y4B4 1467 aa18.59■□□□□ 0.57
UBA3-203ENST00000415609 ABCA10Q8WWZ4 1543 aa18.58■□□□□ 0.57
UBA3-203ENST00000415609 KANK4Q5T7N3 995 aaPredicted RBP18.57■□□□□ 0.56
UBA3-203ENST00000415609 DNAJC5BQ9UF47 199 aa18.54■□□□□ 0.56
UBA3-203ENST00000415609 URB2Q14146 1524 aaKnown RBP18.51■□□□□ 0.55
UBA3-203ENST00000415609 CUL7Q14999 1698 aa18.49■□□□□ 0.55
UBA3-203ENST00000415609 PDS5BQ9NTI5 1447 aa18.47■□□□□ 0.55
UBA3-203ENST00000415609 WDR97A6NE52 1622 aa18.47■□□□□ 0.55
UBA3-203ENST00000415609 RRBP1Q9P2E9 1410 aaKnown RBP18.46■□□□□ 0.55
UBA3-203ENST00000415609 TIAM1Q13009 1591 aa18.45■□□□□ 0.54
UBA3-203ENST00000415609 MAP3K1Q13233 1512 aa18.42■□□□□ 0.54
UBA3-203ENST00000415609 KIF21AQ7Z4S6 1674 aa18.42■□□□□ 0.54
UBA3-203ENST00000415609 FHAD1B1AJZ9 1412 aa18.42■□□□□ 0.54
UBA3-203ENST00000415609 CTTNBP2Q8WZ74 1663 aa18.41■□□□□ 0.54
UBA3-203ENST00000415609 CCNB3Q8WWL7 1395 aa18.4■□□□□ 0.54
UBA3-203ENST00000415609 ABCA5Q8WWZ7 1642 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms