RNA–Protein interactions for RNA: ENST00000415472.6

RBM28-202, Transcript of RNA binding motif protein 28, humanhuman

TSL 2 BASIC

Gene RBM28, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-202ENST00000415472 KRTAP10-8P60410 259 aa6.14□□□□□ -1.43
RBM28-202ENST00000415472 Q5VSD8 79 aa6.12□□□□□ -1.43
RBM28-202ENST00000415472 H0YAA0 97 aa6.11□□□□□ -1.43
RBM28-202ENST00000415472 KIAA1109Q2LD37 5005 aa6.11□□□□□ -1.43
RBM28-202ENST00000415472 COX6B2Q6YFQ2 88 aa6.09□□□□□ -1.44
RBM28-202ENST00000415472 A0A1B0GU33 70 aa6.03□□□□□ -1.44
RBM28-202ENST00000415472 XP32Q5T750 250 aa6.03□□□□□ -1.44
RBM28-202ENST00000415472 LPAP08519 4548 aa6.02□□□□□ -1.45
RBM28-202ENST00000415472 RPL37P61927 97 aaKnown RBP6.02□□□□□ -1.45
RBM28-202ENST00000415472 H1FX-AS1Q4G0G2 97 aa6.02□□□□□ -1.45
RBM28-202ENST00000415472 MT1HL1P0DM35 61 aa5.99□□□□□ -1.45
RBM28-202ENST00000415472 EPPK1P58107 5090 aaKnown RBP5.98□□□□□ -1.45
RBM28-202ENST00000415472 LRP2P98164 4655 aa5.97□□□□□ -1.45
RBM28-202ENST00000415472 CSAG1Q6PB30 78 aa5.94□□□□□ -1.46
RBM28-202ENST00000415472 KRTAP10-6P60371 365 aaPredicted RBP5.93□□□□□ -1.46
RBM28-202ENST00000415472 KRTAP13-4Q3LI77 160 aa5.9□□□□□ -1.47
RBM28-202ENST00000415472 ABCA13Q86UQ4 5058 aa5.89□□□□□ -1.47
RBM28-202ENST00000415472 H3BS24 57 aa5.88□□□□□ -1.47
RBM28-202ENST00000415472 S4R3F8 94 aa5.88□□□□□ -1.47
RBM28-202ENST00000415472 P0C880 135 aa5.84□□□□□ -1.47
RBM28-202ENST00000415472 LINC01554Q52M75 96 aa5.83□□□□□ -1.48
RBM28-202ENST00000415472 KRTAP4-5Q9BYR2 181 aa5.82□□□□□ -1.48
RBM28-202ENST00000415472 A0A0D9SG42 100 aa5.82□□□□□ -1.48
RBM28-202ENST00000415472 CRIPTQ9P021 101 aa5.79□□□□□ -1.48
RBM28-202ENST00000415472 J3QL48 77 aa5.79□□□□□ -1.48
RBM28-202ENST00000415472 TPRXLQ17RH7 258 aa5.76□□□□□ -1.49
RBM28-202ENST00000415472 KRTAP25-1Q3LHN0 102 aa5.74□□□□□ -1.49
RBM28-202ENST00000415472 K7ERS5 55 aa5.74□□□□□ -1.49
RBM28-202ENST00000415472 MUC17Q685J3 4493 aa5.68□□□□□ -1.5
RBM28-202ENST00000415472 KRTAP12-2P59991 146 aa5.68□□□□□ -1.5
RBM28-202ENST00000415472 ROMO1P60602 79 aa5.68□□□□□ -1.5
RBM28-202ENST00000415472 HERC2O95714 4834 aa5.63□□□□□ -1.51
RBM28-202ENST00000415472 KRTAP12-1P59990 96 aa5.62□□□□□ -1.51
RBM28-202ENST00000415472 KRTAP4-1Q9BYQ7 146 aa5.62□□□□□ -1.51
RBM28-202ENST00000415472 LCE2BO14633 110 aa5.59□□□□□ -1.51
RBM28-202ENST00000415472 SPINT4Q6UDR6 99 aa5.59□□□□□ -1.51
RBM28-202ENST00000415472 C10orf95Q9H7T3 257 aa5.58□□□□□ -1.52
RBM28-202ENST00000415472 M0QZ58 72 aa5.54□□□□□ -1.52
RBM28-202ENST00000415472 MUC2Q02817 5179 aa5.53□□□□□ -1.52
RBM28-202ENST00000415472 SEC61BP60468 96 aaKnown RBP5.52□□□□□ -1.53
RBM28-202ENST00000415472 LORP23490 312 aaPredicted RBP5.51□□□□□ -1.53
RBM28-202ENST00000415472 KRTAP19-2Q3LHN2 52 aa5.49□□□□□ -1.53
RBM28-202ENST00000415472 R4GN34 69 aa5.45□□□□□ -1.54
RBM28-202ENST00000415472 HERC1Q15751 4861 aa5.43□□□□□ -1.54
RBM28-202ENST00000415472 BIRC6Q9NR09 4857 aa5.41□□□□□ -1.54
RBM28-202ENST00000415472 FLGP20930 4061 aaPredicted RBP5.38□□□□□ -1.55
RBM28-202ENST00000415472 PCLOQ9Y6V0 5065 aa5.36□□□□□ -1.55
RBM28-202ENST00000415472 LCE2CQ5TA81 110 aa5.32□□□□□ -1.56
RBM28-202ENST00000415472 HMCN2Q8NDA2 5059 aa5.32□□□□□ -1.56
RBM28-202ENST00000415472 FAT4Q6V0I7 4981 aa5.28□□□□□ -1.56
RBM28-202ENST00000415472 KRTAP15-1Q3LI76 137 aa5.26□□□□□ -1.57
RBM28-202ENST00000415472 LCE2AQ5TA79 106 aaPredicted RBP5.18□□□□□ -1.58
RBM28-202ENST00000415472 CAMK2N1Q7Z7J9 78 aa5.17□□□□□ -1.58
RBM28-202ENST00000415472 RNF213Q63HN8 5207 aa5.14□□□□□ -1.59
RBM28-202ENST00000415472 UBR4Q5T4S7 5183 aa5.11□□□□□ -1.59
RBM28-202ENST00000415472 NDUFAF8A1L188 74 aa5.11□□□□□ -1.59
RBM28-202ENST00000415472 A0A0A0MQY5 61 aa5.09□□□□□ -1.59
RBM28-202ENST00000415472 PLAC4Q8WY50 150 aa5.03□□□□□ -1.6
RBM28-202ENST00000415472 KRTAP19-1Q8IUB9 90 aa5.02□□□□□ -1.61
RBM28-202ENST00000415472 MT1HP80294 61 aa5□□□□□ -1.61
RBM28-202ENST00000415472 M0R2T5 61 aa4.98□□□□□ -1.61
RBM28-202ENST00000415472 SPRR2GQ9BYE4 73 aa4.98□□□□□ -1.61
RBM28-202ENST00000415472 PP632Q6XCG6 107 aa4.98□□□□□ -1.61
RBM28-202ENST00000415472 MT1FP04733 61 aa4.94□□□□□ -1.62
RBM28-202ENST00000415472 TNP1P09430 55 aa4.94□□□□□ -1.62
RBM28-202ENST00000415472 MT2AP02795 61 aa4.93□□□□□ -1.62
RBM28-202ENST00000415472 KRTAP9-8Q9BYQ0 159 aa4.9□□□□□ -1.63
RBM28-202ENST00000415472 KRTAP10-10P60014 251 aa4.89□□□□□ -1.63
RBM28-202ENST00000415472 KRTAP23-1A1A580 65 aa4.81□□□□□ -1.64
RBM28-202ENST00000415472 LCE3AQ5TA76 89 aa4.77□□□□□ -1.65
RBM28-202ENST00000415472 LUZP6Q538Z0 58 aa4.77□□□□□ -1.65
RBM28-202ENST00000415472 KRTAP19-8Q3LI54 63 aa4.76□□□□□ -1.65
RBM28-202ENST00000415472 MT1BP07438 61 aa4.76□□□□□ -1.65
RBM28-202ENST00000415472 KRTAP10-5P60370 271 aa4.72□□□□□ -1.65
RBM28-202ENST00000415472 MT1XP80297 61 aa4.72□□□□□ -1.65
RBM28-202ENST00000415472 SPRR5A0A1B0GTR4 108 aa4.7□□□□□ -1.66
RBM28-202ENST00000415472 KRTAP9-6A0A140TA67 174 aa4.69□□□□□ -1.66
RBM28-202ENST00000415472 KRTAP9-3Q9BYQ3 159 aa4.69□□□□□ -1.66
RBM28-202ENST00000415472 KRTAP10-7P60409 375 aaPredicted RBP4.6□□□□□ -1.67
RBM28-202ENST00000415472 KRTAP8-1Q8IUC2 63 aa4.6□□□□□ -1.67
RBM28-202ENST00000415472 USH2AO75445 5202 aa4.58□□□□□ -1.68
RBM28-202ENST00000415472 KRTAP10-12P60413 245 aa4.56□□□□□ -1.68
RBM28-202ENST00000415472 KRTAP12-3P60328 96 aa4.51□□□□□ -1.69
RBM28-202ENST00000415472 KMT2DO14686 5537 aa4.48□□□□□ -1.69
RBM28-202ENST00000415472 KRTAP9-2Q9BYQ4 174 aa4.43□□□□□ -1.7
RBM28-202ENST00000415472 PRO2289Q9P1D8 64 aa4.43□□□□□ -1.7
RBM28-202ENST00000415472 KRTAP19-5Q3LI72 72 aa4.38□□□□□ -1.71
RBM28-202ENST00000415472 KRTAP4-8A0A0G2JLE6 195 aa4.36□□□□□ -1.71
RBM28-202ENST00000415472 KRTAP4-8Q9BYQ9 185 aa4.36□□□□□ -1.71
RBM28-202ENST00000415472 LCE3CQ5T5A8 94 aa4.25□□□□□ -1.73
RBM28-202ENST00000415472 SSPOA2VEC9 5147 aa4.22□□□□□ -1.73
RBM28-202ENST00000415472 LOC100996750A0A140TA64 210 aa4.21□□□□□ -1.74
RBM28-202ENST00000415472 KRTAP19-7Q3SYF9 63 aa4.21□□□□□ -1.74
RBM28-202ENST00000415472 KRTAP4-6Q9BYQ5 205 aa4.21□□□□□ -1.74
RBM28-202ENST00000415472 FSIP2Q5CZC0 6907 aa4.2□□□□□ -1.74
RBM28-202ENST00000415472 KRTAP9-6A8MVA2 160 aa4.18□□□□□ -1.74
RBM28-202ENST00000415472 KRTAP4-7Q9BYR0 210 aa4.17□□□□□ -1.74
RBM28-202ENST00000415472 KRTAP9-7A8MTY7 169 aa4.08□□□□□ -1.76
RBM28-202ENST00000415472 MT1EP04732 61 aa4.07□□□□□ -1.76
RBM28-202ENST00000415472 CRCT1Q9UGL9 99 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms