RNA–Protein interactions for RNA: ENST00000414670.2

ITGB1-203, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-203ENST00000414670 C8orf87E5RJ46 101 aa3.6□□□□□ -1.83
ITGB1-203ENST00000414670 SPINK7P58062 85 aa3.6□□□□□ -1.83
ITGB1-203ENST00000414670 SPAG11AQ6PDA7 123 aa3.6□□□□□ -1.83
ITGB1-203ENST00000414670 SPATA8Q6RVD6 105 aa3.6□□□□□ -1.83
ITGB1-203ENST00000414670 C8orf17Q9NRJ1 99 aa3.6□□□□□ -1.83
ITGB1-203ENST00000414670 ACYP2P14621 99 aa3.59□□□□□ -1.83
ITGB1-203ENST00000414670 LINC00304Q8N9R0 145 aa3.59□□□□□ -1.83
ITGB1-203ENST00000414670 Q96NJ1 140 aa3.59□□□□□ -1.83
ITGB1-203ENST00000414670 SPINK1P00995 79 aa3.58□□□□□ -1.84
ITGB1-203ENST00000414670 MRPL34Q9BQ48 92 aaKnown RBP3.58□□□□□ -1.84
ITGB1-203ENST00000414670 A0A1B0GVX0 72 aa3.57□□□□□ -1.84
ITGB1-203ENST00000414670 KRTAP10-8P60410 259 aa3.57□□□□□ -1.84
ITGB1-203ENST00000414670 LINC00313P59037 77 aa3.56□□□□□ -1.84
ITGB1-203ENST00000414670 RPS29P62273 56 aaKnown RBP3.56□□□□□ -1.84
ITGB1-203ENST00000414670 KRTAP13-3Q3SY46 172 aa3.56□□□□□ -1.84
ITGB1-203ENST00000414670 PCOTHQ58A44 107 aa3.56□□□□□ -1.84
ITGB1-203ENST00000414670 LCE4AQ5TA78 99 aa3.56□□□□□ -1.84
ITGB1-203ENST00000414670 DMBT1Q9UGM3 2413 aaPredicted RBP3.55□□□□□ -1.84
ITGB1-203ENST00000414670 LINC01554Q52M75 96 aa3.55□□□□□ -1.84
ITGB1-203ENST00000414670 PKHD1L1Q86WI1 4243 aa3.54□□□□□ -1.84
ITGB1-203ENST00000414670 FAT4Q6V0I7 4981 aa3.53□□□□□ -1.84
ITGB1-203ENST00000414670 IGHV6-1A0A0B4J1U7 121 aa3.52□□□□□ -1.85
ITGB1-203ENST00000414670 MT1HL1P0DM35 61 aa3.52□□□□□ -1.85
ITGB1-203ENST00000414670 LCE5AQ5TCM9 118 aa3.52□□□□□ -1.85
ITGB1-203ENST00000414670 DMAC1Q96GE9 116 aa3.52□□□□□ -1.85
ITGB1-203ENST00000414670 RETNLBQ9BQ08 111 aa3.52□□□□□ -1.85
ITGB1-203ENST00000414670 KRTAP9-7A8MTY7 169 aa3.51□□□□□ -1.85
ITGB1-203ENST00000414670 UQCR11O14957 56 aa3.51□□□□□ -1.85
ITGB1-203ENST00000414670 LRP1Q07954 4544 aaKnown RBP3.51□□□□□ -1.85
ITGB1-203ENST00000414670 HMCN2Q8NDA2 5059 aa3.5□□□□□ -1.85
ITGB1-203ENST00000414670 FAT3Q8TDW7 4589 aa3.5□□□□□ -1.85
ITGB1-203ENST00000414670 A0A1B0GU69 56 aa3.49□□□□□ -1.85
ITGB1-203ENST00000414670 MIR22HGQ0VDD5 57 aa3.48□□□□□ -1.85
ITGB1-203ENST00000414670 Q5W150 140 aa3.48□□□□□ -1.85
ITGB1-203ENST00000414670 FSIP2Q5CZC0 6907 aa3.48□□□□□ -1.85
ITGB1-203ENST00000414670 FLG2Q5D862 2391 aaPredicted RBP3.48□□□□□ -1.85
ITGB1-203ENST00000414670 NOTCH2NLQ7Z3S9 236 aa3.47□□□□□ -1.85
ITGB1-203ENST00000414670 TNXBP22105 4242 aa3.46□□□□□ -1.85
ITGB1-203ENST00000414670 MYCBP2O75592 4640 aa3.46□□□□□ -1.86
ITGB1-203ENST00000414670 IGKV2-30P06310 120 aa3.45□□□□□ -1.86
ITGB1-203ENST00000414670 PRAC1Q96KF2 57 aa3.45□□□□□ -1.86
ITGB1-203ENST00000414670 KRTAP16-1A8MUX0 517 aa3.42□□□□□ -1.86
ITGB1-203ENST00000414670 ADM2Q7Z4H4 148 aa3.42□□□□□ -1.86
ITGB1-203ENST00000414670 C9orf92A6NGG3 77 aa3.41□□□□□ -1.86
ITGB1-203ENST00000414670 CSAG1Q6PB30 78 aa3.4□□□□□ -1.87
ITGB1-203ENST00000414670 IGKV2D-30A0A075B6S6 120 aa3.39□□□□□ -1.87
ITGB1-203ENST00000414670 A8MUU9 505 aa3.38□□□□□ -1.87
ITGB1-203ENST00000414670 C20orf166-AS1Q96NR2 134 aa3.38□□□□□ -1.87
ITGB1-203ENST00000414670 CRCT1Q9UGL9 99 aa3.38□□□□□ -1.87
ITGB1-203ENST00000414670 TPRXLQ17RH7 258 aa3.36□□□□□ -1.87
ITGB1-203ENST00000414670 KRTAP25-1Q3LHN0 102 aa3.35□□□□□ -1.87
ITGB1-203ENST00000414670 RPL37P61927 97 aaKnown RBP3.33□□□□□ -1.88
ITGB1-203ENST00000414670 ROMO1P60602 79 aa3.32□□□□□ -1.88
ITGB1-203ENST00000414670 KRTAP9-3Q9BYQ3 159 aa3.32□□□□□ -1.88
ITGB1-203ENST00000414670 A0A1B0GU33 70 aa3.28□□□□□ -1.88
ITGB1-203ENST00000414670 H0YAA0 97 aa3.26□□□□□ -1.89
ITGB1-203ENST00000414670 K7ERS5 55 aa3.26□□□□□ -1.89
ITGB1-203ENST00000414670 SEC61BP60468 96 aaKnown RBP3.26□□□□□ -1.89
ITGB1-203ENST00000414670 LPAP08519 4548 aa3.25□□□□□ -1.89
ITGB1-203ENST00000414670 H1FX-AS1Q4G0G2 97 aa3.25□□□□□ -1.89
ITGB1-203ENST00000414670 LRP2P98164 4655 aa3.22□□□□□ -1.89
ITGB1-203ENST00000414670 COX6B2Q6YFQ2 88 aa3.21□□□□□ -1.9
ITGB1-203ENST00000414670 P0C880 135 aa3.18□□□□□ -1.9
ITGB1-203ENST00000414670 KRTAP3-1Q9BYR8 98 aa3.18□□□□□ -1.9
ITGB1-203ENST00000414670 MUC17Q685J3 4493 aa3.18□□□□□ -1.9
ITGB1-203ENST00000414670 KRTAP4-1Q9BYQ7 146 aa3.17□□□□□ -1.9
ITGB1-203ENST00000414670 KRTAP19-4Q3LI73 84 aa3.16□□□□□ -1.9
ITGB1-203ENST00000414670 GPR98Q8WXG9 6306 aa3.13□□□□□ -1.91
ITGB1-203ENST00000414670 A0A0A0MQY5 61 aa3.12□□□□□ -1.91
ITGB1-203ENST00000414670 KRTAP15-1Q3LI76 137 aa3.12□□□□□ -1.91
ITGB1-203ENST00000414670 NEBP20929 6669 aa3.1□□□□□ -1.91
ITGB1-203ENST00000414670 KRTAP10-6P60371 365 aaPredicted RBP3.09□□□□□ -1.91
ITGB1-203ENST00000414670 KRTAP19-2Q3LHN2 52 aa3.08□□□□□ -1.92
ITGB1-203ENST00000414670 SSPOA2VEC9 5147 aa3.07□□□□□ -1.92
ITGB1-203ENST00000414670 SPINT4Q6UDR6 99 aa3.07□□□□□ -1.92
ITGB1-203ENST00000414670 CRIPTQ9P021 101 aa3.07□□□□□ -1.92
ITGB1-203ENST00000414670 S4R3F8 94 aa3.07□□□□□ -1.92
ITGB1-203ENST00000414670 KRTAP23-1A1A580 65 aa3.06□□□□□ -1.92
ITGB1-203ENST00000414670 SYNE2Q8WXH0 6885 aaKnown RBP3.05□□□□□ -1.92
ITGB1-203ENST00000414670 NDUFAF8A1L188 74 aa3.01□□□□□ -1.93
ITGB1-203ENST00000414670 KRTAP13-4Q3LI77 160 aa3□□□□□ -1.93
ITGB1-203ENST00000414670 M0QZ58 72 aa2.98□□□□□ -1.93
ITGB1-203ENST00000414670 MT1HP80294 61 aa2.97□□□□□ -1.93
ITGB1-203ENST00000414670 KRTAP12-1P59990 96 aa2.96□□□□□ -1.94
ITGB1-203ENST00000414670 KRTAP20-1Q3LI63 56 aa2.96□□□□□ -1.94
ITGB1-203ENST00000414670 M0R2T5 61 aa2.95□□□□□ -1.94
ITGB1-203ENST00000414670 A0A0D9SG42 100 aa2.94□□□□□ -1.94
ITGB1-203ENST00000414670 KRTAP12-2P59991 146 aa2.94□□□□□ -1.94
ITGB1-203ENST00000414670 C10orf95Q9H7T3 257 aa2.94□□□□□ -1.94
ITGB1-203ENST00000414670 FLGP20930 4061 aaPredicted RBP2.93□□□□□ -1.94
ITGB1-203ENST00000414670 MACF1Q9UPN3 7388 aaKnown RBP2.91□□□□□ -1.94
ITGB1-203ENST00000414670 PLAC4Q8WY50 150 aa2.88□□□□□ -1.95
ITGB1-203ENST00000414670 USH2AO75445 5202 aa2.87□□□□□ -1.95
ITGB1-203ENST00000414670 MT2AP02795 61 aa2.85□□□□□ -1.95
ITGB1-203ENST00000414670 PP632Q6XCG6 107 aa2.85□□□□□ -1.95
ITGB1-203ENST00000414670 KRTAP10-10P60014 251 aa2.83□□□□□ -1.96
ITGB1-203ENST00000414670 LUZP6Q538Z0 58 aa2.83□□□□□ -1.96
ITGB1-203ENST00000414670 R4GN34 69 aa2.83□□□□□ -1.96
ITGB1-203ENST00000414670 MT1FP04733 61 aa2.82□□□□□ -1.96
ITGB1-203ENST00000414670 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms