RNA–Protein interactions for RNA: ENST00000414670.2

ITGB1-203, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-203ENST00000414670 NISCHQ9Y2I1 1504 aa14.16□□□□□ -0.14
ITGB1-203ENST00000414670 AEBP2Q6ZN18 517 aaPredicted RBP13.02□□□□□ -0.33
ITGB1-203ENST00000414670 CCDC180Q9P1Z9 1646 aa12.33□□□□□ -0.44
ITGB1-203ENST00000414670 CHIC1Q5VXU3 224 aa12.16□□□□□ -0.46
ITGB1-203ENST00000414670 ZCCHC6Q5VYS8 1495 aaKnown RBP11.88□□□□□ -0.51
ITGB1-203ENST00000414670 ABCC9O60706 1549 aa11.81□□□□□ -0.52
ITGB1-203ENST00000414670 DCAF8L2P0C7V8 631 aa11.77□□□□□ -0.53
ITGB1-203ENST00000414670 DCAF1Q9Y4B6 1507 aa11.71□□□□□ -0.53
ITGB1-203ENST00000414670 MYO15BQ96JP2 1530 aa11.61□□□□□ -0.55
ITGB1-203ENST00000414670 NACADO15069 1562 aa11.55□□□□□ -0.56
ITGB1-203ENST00000414670 SHROOM4Q9ULL8 1493 aa11.51□□□□□ -0.57
ITGB1-203ENST00000414670 RB1CC1Q8TDY2 1594 aa11.46□□□□□ -0.57
ITGB1-203ENST00000414670 SCRIBQ14160 1630 aa11.34□□□□□ -0.59
ITGB1-203ENST00000414670 POTEDQ86YR6 584 aa11.25□□□□□ -0.61
ITGB1-203ENST00000414670 SENP3Q9H4L4 574 aaPredicted RBP11.25□□□□□ -0.61
ITGB1-203ENST00000414670 PABPN1Q86U42 306 aaKnown RBP eCLIP11.14□□□□□ -0.63
ITGB1-203ENST00000414670 BICRAQ9NZM4 1560 aa11.1□□□□□ -0.63
ITGB1-203ENST00000414670 UNC13AQ9UPW8 1703 aa11.09□□□□□ -0.63
ITGB1-203ENST00000414670 SUPT5HO00267 1087 aaKnown RBP11.05□□□□□ -0.64
ITGB1-203ENST00000414670 CECR2Q9BXF3 1484 aa11.01□□□□□ -0.65
ITGB1-203ENST00000414670 PHF23Q9BUL5 403 aaPredicted RBP10.98□□□□□ -0.65
ITGB1-203ENST00000414670 RSF1Q96T23 1441 aaPredicted RBP10.97□□□□□ -0.65
ITGB1-203ENST00000414670 BAZ1AQ9NRL2 1556 aaPredicted RBP10.94□□□□□ -0.66
ITGB1-203ENST00000414670 MROH2BQ7Z745 1585 aa10.93□□□□□ -0.66
ITGB1-203ENST00000414670 SMARCA4P51532 1647 aa10.87□□□□□ -0.67
ITGB1-203ENST00000414670 EIF4G1Q04637 1599 aaKnown RBP10.79□□□□□ -0.68
ITGB1-203ENST00000414670 WIZO95785 1651 aa10.79□□□□□ -0.68
ITGB1-203ENST00000414670 ATAD2BQ9ULI0 1458 aa10.76□□□□□ -0.69
ITGB1-203ENST00000414670 DNAJC5Q9H3Z4 198 aa10.76□□□□□ -0.69
ITGB1-203ENST00000414670 PEG3Q9GZU2 1588 aa10.76□□□□□ -0.69
ITGB1-203ENST00000414670 SMARCA2P51531 1590 aa10.73□□□□□ -0.69
ITGB1-203ENST00000414670 TOP2AP11388 1531 aaKnown RBP10.72□□□□□ -0.69
ITGB1-203ENST00000414670 NCAPD3P42695 1498 aa10.7□□□□□ -0.7
ITGB1-203ENST00000414670 BAZ1BQ9UIG0 1483 aaKnown RBP10.69□□□□□ -0.7
ITGB1-203ENST00000414670 HMGXB3Q12766 1538 aa10.63□□□□□ -0.71
ITGB1-203ENST00000414670 CC2D2AQ9P2K1 1620 aa10.63□□□□□ -0.71
ITGB1-203ENST00000414670 CCDC88BA6NC98 1476 aa10.62□□□□□ -0.71
ITGB1-203ENST00000414670 DNAJC5BQ9UF47 199 aa10.61□□□□□ -0.71
ITGB1-203ENST00000414670 FOXD1Q16676 465 aa10.56□□□□□ -0.72
ITGB1-203ENST00000414670 CADPSQ9ULU8 1353 aa10.43□□□□□ -0.74
ITGB1-203ENST00000414670 CFTRP13569 1480 aa10.42□□□□□ -0.74
ITGB1-203ENST00000414670 TRIM41Q8WV44 630 aa10.42□□□□□ -0.74
ITGB1-203ENST00000414670 ABCC8Q09428 1581 aa10.34□□□□□ -0.75
ITGB1-203ENST00000414670 WRNQ14191 1432 aaPredicted RBP eCLIP10.33□□□□□ -0.76
ITGB1-203ENST00000414670 NESP48681 1621 aa10.31□□□□□ -0.76
ITGB1-203ENST00000414670 LAMC3Q9Y6N6 1575 aa10.31□□□□□ -0.76
ITGB1-203ENST00000414670 FANCD2Q9BXW9 1451 aa10.29□□□□□ -0.76
ITGB1-203ENST00000414670 PDS5BQ9NTI5 1447 aa10.28□□□□□ -0.76
ITGB1-203ENST00000414670 SYNJ1O43426 1573 aa10.24□□□□□ -0.77
ITGB1-203ENST00000414670 CEP164Q9UPV0 1460 aa10.23□□□□□ -0.77
ITGB1-203ENST00000414670 CUX1P39880 1505 aa10.23□□□□□ -0.77
ITGB1-203ENST00000414670 FAM9AQ8IZU1 332 aaPredicted RBP10.21□□□□□ -0.77
ITGB1-203ENST00000414670 TOP2BQ02880 1626 aa10.21□□□□□ -0.78
ITGB1-203ENST00000414670 PRDM2Q13029 1718 aa10.21□□□□□ -0.78
ITGB1-203ENST00000414670 MSH5O43196 834 aa10.2□□□□□ -0.78
ITGB1-203ENST00000414670 BIVM-ERCC5R4GMW8 1640 aa10.18□□□□□ -0.78
ITGB1-203ENST00000414670 SOGA1O94964 1423 aa10.17□□□□□ -0.78
ITGB1-203ENST00000414670 TOPBP1Q92547 1522 aa10.16□□□□□ -0.78
ITGB1-203ENST00000414670 EEA1Q15075 1411 aa10.16□□□□□ -0.78
ITGB1-203ENST00000414670 DNMBPQ6XZF7 1577 aa10.15□□□□□ -0.78
ITGB1-203ENST00000414670 URB2Q14146 1524 aaKnown RBP10.15□□□□□ -0.78
ITGB1-203ENST00000414670 ERCC6Q03468 1493 aa10.14□□□□□ -0.79
ITGB1-203ENST00000414670 FGD5Q6ZNL6 1462 aa10.14□□□□□ -0.79
ITGB1-203ENST00000414670 MRC2Q9UBG0 1479 aa10.13□□□□□ -0.79
ITGB1-203ENST00000414670 LOC105371045A0A1W2PR82 267 aa10.12□□□□□ -0.79
ITGB1-203ENST00000414670 CSRNP3Q8WYN3 585 aa10.12□□□□□ -0.79
ITGB1-203ENST00000414670 RUSC2Q8N2Y8 1516 aa10.12□□□□□ -0.79
ITGB1-203ENST00000414670 KIF21AQ7Z4S6 1674 aa10.11□□□□□ -0.79
ITGB1-203ENST00000414670 POLA1P09884 1462 aaPredicted RBP10.1□□□□□ -0.79
ITGB1-203ENST00000414670 KIF27Q86VH2 1401 aa10.09□□□□□ -0.79
ITGB1-203ENST00000414670 CUX2O14529 1486 aa10.07□□□□□ -0.8
ITGB1-203ENST00000414670 RAD54L2Q9Y4B4 1467 aa10.07□□□□□ -0.8
ITGB1-203ENST00000414670 WDR62O43379 1518 aa10.06□□□□□ -0.8
ITGB1-203ENST00000414670 ABCA10Q8WWZ4 1543 aa10.05□□□□□ -0.8
ITGB1-203ENST00000414670 EHMT2Q96KQ7 1210 aa10.04□□□□□ -0.8
ITGB1-203ENST00000414670 IGF1RP08069 1367 aa10.01□□□□□ -0.81
ITGB1-203ENST00000414670 THOC2Q8NI27 1593 aaKnown RBP10.01□□□□□ -0.81
ITGB1-203ENST00000414670 TDRD9Q8NDG6 1382 aaKnown RBP10.01□□□□□ -0.81
ITGB1-203ENST00000414670 IFT140Q96RY7 1462 aa10□□□□□ -0.81
ITGB1-203ENST00000414670 GOLGA3Q08378 1498 aa9.99□□□□□ -0.81
ITGB1-203ENST00000414670 PRXQ9BXM0 1461 aa9.99□□□□□ -0.81
ITGB1-203ENST00000414670 UBTFP17480 764 aaKnown RBP9.98□□□□□ -0.81
ITGB1-203ENST00000414670 TARBP1Q13395 1621 aaKnown RBP9.97□□□□□ -0.81
ITGB1-203ENST00000414670 GAPVD1Q14C86 1478 aa9.97□□□□□ -0.81
ITGB1-203ENST00000414670 KIF21BO75037 1637 aa9.96□□□□□ -0.81
ITGB1-203ENST00000414670 CARMIL1Q5VZK9 1371 aa9.96□□□□□ -0.82
ITGB1-203ENST00000414670 TNIKQ9UKE5 1360 aa9.96□□□□□ -0.82
ITGB1-203ENST00000414670 RAPGEF2Q9Y4G8 1499 aa9.96□□□□□ -0.82
ITGB1-203ENST00000414670 WDR97A6NE52 1622 aa9.94□□□□□ -0.82
ITGB1-203ENST00000414670 AQRO60306 1485 aaKnown RBP eCLIP9.94□□□□□ -0.82
ITGB1-203ENST00000414670 ERICH3Q5RHP9 1530 aa9.93□□□□□ -0.82
ITGB1-203ENST00000414670 ABCA5Q8WWZ7 1642 aa9.93□□□□□ -0.82
ITGB1-203ENST00000414670 ZNF608Q9ULD9 1512 aaPredicted RBP9.92□□□□□ -0.82
ITGB1-203ENST00000414670 HRCP23327 699 aa9.92□□□□□ -0.82
ITGB1-203ENST00000414670 GRIN2BQ13224 1484 aa9.91□□□□□ -0.82
ITGB1-203ENST00000414670 CEP162Q5TB80 1403 aa9.88□□□□□ -0.83
ITGB1-203ENST00000414670 FHAD1B1AJZ9 1412 aa9.87□□□□□ -0.83
ITGB1-203ENST00000414670 CUL7Q14999 1698 aa9.87□□□□□ -0.83
ITGB1-203ENST00000414670 EIF4G3O43432 1585 aaKnown RBP9.85□□□□□ -0.83
ITGB1-203ENST00000414670 PELP1Q8IZL8 1130 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms