RNA–Protein interactions for RNA: ENST00000411539.6

SEMA4B-202, Transcript of semaphorin 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4B, Length 3,807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-202ENST00000411539 PLAC4Q8WY50 150 aa8.18□□□□□ -1.1
SEMA4B-202ENST00000411539 KRTAP3-3Q9BYR6 98 aa8.17□□□□□ -1.1
SEMA4B-202ENST00000411539 J3QL48 77 aa8.17□□□□□ -1.1
SEMA4B-202ENST00000411539 KRTAP3-2Q9BYR7 98 aa8.16□□□□□ -1.1
SEMA4B-202ENST00000411539 DNAH3Q8TD57 4116 aa8.13□□□□□ -1.11
SEMA4B-202ENST00000411539 DNAH2Q9P225 4427 aa8.11□□□□□ -1.11
SEMA4B-202ENST00000411539 KRTAP15-1Q3LI76 137 aa8.09□□□□□ -1.11
SEMA4B-202ENST00000411539 A0A1B0GVY2 172 aa8.07□□□□□ -1.12
SEMA4B-202ENST00000411539 SEC61BP60468 96 aaKnown RBP8.05□□□□□ -1.12
SEMA4B-202ENST00000411539 HECTD4Q9Y4D8 3996 aa8.05□□□□□ -1.12
SEMA4B-202ENST00000411539 DNAH6Q9C0G6 4158 aa8.01□□□□□ -1.13
SEMA4B-202ENST00000411539 DNAH5Q8TE73 4624 aa8□□□□□ -1.13
SEMA4B-202ENST00000411539 FAT1Q14517 4588 aa7.96□□□□□ -1.14
SEMA4B-202ENST00000411539 VPS13BQ7Z7G8 4022 aa7.96□□□□□ -1.14
SEMA4B-202ENST00000411539 KRTAP10-4P60372 401 aaPredicted RBP7.9□□□□□ -1.15
SEMA4B-202ENST00000411539 PP632Q6XCG6 107 aa7.84□□□□□ -1.15
SEMA4B-202ENST00000411539 TNP1P09430 55 aa7.8□□□□□ -1.16
SEMA4B-202ENST00000411539 MYCBP2O75592 4640 aa7.8□□□□□ -1.16
SEMA4B-202ENST00000411539 DYNC2H1Q8NCM8 4307 aaKnown RBP7.8□□□□□ -1.16
SEMA4B-202ENST00000411539 HYDINQ4G0P3 5121 aa7.8□□□□□ -1.16
SEMA4B-202ENST00000411539 KMT2CQ8NEZ4 4911 aaKnown RBP7.75□□□□□ -1.17
SEMA4B-202ENST00000411539 M0R2T5 61 aa7.73□□□□□ -1.17
SEMA4B-202ENST00000411539 DYNC1H1Q14204 4646 aaKnown RBP7.71□□□□□ -1.18
SEMA4B-202ENST00000411539 SACSQ9NZJ4 4579 aa7.66□□□□□ -1.18
SEMA4B-202ENST00000411539 PKHD1P08F94 4074 aa7.63□□□□□ -1.19
SEMA4B-202ENST00000411539 MT1HL1P0DM35 61 aa7.58□□□□□ -1.2
SEMA4B-202ENST00000411539 KIAA1109Q2LD37 5005 aa7.57□□□□□ -1.2
SEMA4B-202ENST00000411539 APOBP04114 4563 aaKnown RBP7.57□□□□□ -1.2
SEMA4B-202ENST00000411539 LORP23490 312 aaPredicted RBP7.55□□□□□ -1.2
SEMA4B-202ENST00000411539 LRP1Q07954 4544 aaKnown RBP7.54□□□□□ -1.2
SEMA4B-202ENST00000411539 RYR3Q15413 4870 aa7.5□□□□□ -1.21
SEMA4B-202ENST00000411539 RYR2Q92736 4967 aa7.5□□□□□ -1.21
SEMA4B-202ENST00000411539 FAT2Q9NYQ8 4349 aa7.44□□□□□ -1.22
SEMA4B-202ENST00000411539 KRTAP4-5Q9BYR2 181 aa7.44□□□□□ -1.22
SEMA4B-202ENST00000411539 FAT3Q8TDW7 4589 aa7.43□□□□□ -1.22
SEMA4B-202ENST00000411539 RYR1P21817 5038 aa7.37□□□□□ -1.23
SEMA4B-202ENST00000411539 PKD1P98161 4303 aa7.35□□□□□ -1.23
SEMA4B-202ENST00000411539 EPPK1P58107 5090 aaKnown RBP7.3□□□□□ -1.24
SEMA4B-202ENST00000411539 KRTAP17-1Q9BYP8 105 aa7.27□□□□□ -1.25
SEMA4B-202ENST00000411539 LRP2P98164 4655 aa7.27□□□□□ -1.25
SEMA4B-202ENST00000411539 HSPG2P98160 4391 aa7.26□□□□□ -1.25
SEMA4B-202ENST00000411539 KRTAP10-10P60014 251 aa7.15□□□□□ -1.26
SEMA4B-202ENST00000411539 KRTAP4-1Q9BYQ7 146 aa7.12□□□□□ -1.27
SEMA4B-202ENST00000411539 HERC2O95714 4834 aa7.08□□□□□ -1.28
SEMA4B-202ENST00000411539 PKHD1L1Q86WI1 4243 aa7.02□□□□□ -1.29
SEMA4B-202ENST00000411539 KRTAP23-1A1A580 65 aa6.94□□□□□ -1.3
SEMA4B-202ENST00000411539 ABCA13Q86UQ4 5058 aa6.94□□□□□ -1.3
SEMA4B-202ENST00000411539 LPAP08519 4548 aa6.93□□□□□ -1.3
SEMA4B-202ENST00000411539 LCE3AQ5TA76 89 aa6.93□□□□□ -1.3
SEMA4B-202ENST00000411539 BIRC6Q9NR09 4857 aa6.92□□□□□ -1.3
SEMA4B-202ENST00000411539 TNXBP22105 4242 aa6.89□□□□□ -1.31
SEMA4B-202ENST00000411539 PRO2289Q9P1D8 64 aa6.89□□□□□ -1.31
SEMA4B-202ENST00000411539 INE1O15225 51 aa6.8□□□□□ -1.32
SEMA4B-202ENST00000411539 HERC1Q15751 4861 aa6.76□□□□□ -1.33
SEMA4B-202ENST00000411539 KRTAP12-3P60328 96 aa6.71□□□□□ -1.34
SEMA4B-202ENST00000411539 KRTAP10-12P60413 245 aa6.68□□□□□ -1.34
SEMA4B-202ENST00000411539 PCLOQ9Y6V0 5065 aa6.67□□□□□ -1.34
SEMA4B-202ENST00000411539 SPRR5A0A1B0GTR4 108 aa6.62□□□□□ -1.35
SEMA4B-202ENST00000411539 SPRR2GQ9BYE4 73 aa6.58□□□□□ -1.36
SEMA4B-202ENST00000411539 MUC2Q02817 5179 aa6.57□□□□□ -1.36
SEMA4B-202ENST00000411539 RNF213Q63HN8 5207 aa6.54□□□□□ -1.36
SEMA4B-202ENST00000411539 KRTAP19-1Q8IUB9 90 aa6.5□□□□□ -1.37
SEMA4B-202ENST00000411539 KRTAP19-2Q3LHN2 52 aa6.47□□□□□ -1.37
SEMA4B-202ENST00000411539 UBR4Q5T4S7 5183 aa6.47□□□□□ -1.37
SEMA4B-202ENST00000411539 KRTAP8-1Q8IUC2 63 aa6.45□□□□□ -1.38
SEMA4B-202ENST00000411539 MT2AP02795 61 aa6.41□□□□□ -1.38
SEMA4B-202ENST00000411539 MT1FP04733 61 aa6.41□□□□□ -1.38
SEMA4B-202ENST00000411539 MUC17Q685J3 4493 aa6.41□□□□□ -1.38
SEMA4B-202ENST00000411539 MT1HP80294 61 aa6.38□□□□□ -1.39
SEMA4B-202ENST00000411539 FLGP20930 4061 aaPredicted RBP6.33□□□□□ -1.4
SEMA4B-202ENST00000411539 FAT4Q6V0I7 4981 aa6.31□□□□□ -1.4
SEMA4B-202ENST00000411539 HMCN2Q8NDA2 5059 aa6.29□□□□□ -1.4
SEMA4B-202ENST00000411539 LCE2CQ5TA81 110 aa6.22□□□□□ -1.41
SEMA4B-202ENST00000411539 KRTAP10-7P60409 375 aaPredicted RBP6.21□□□□□ -1.41
SEMA4B-202ENST00000411539 MT1XP80297 61 aa6.18□□□□□ -1.42
SEMA4B-202ENST00000411539 KRTAP10-5P60370 271 aa6.17□□□□□ -1.42
SEMA4B-202ENST00000411539 KRTAP19-5Q3LI72 72 aa6.16□□□□□ -1.42
SEMA4B-202ENST00000411539 KRTAP19-8Q3LI54 63 aa6.14□□□□□ -1.43
SEMA4B-202ENST00000411539 MT1BP07438 61 aa6.11□□□□□ -1.43
SEMA4B-202ENST00000411539 LCE3CQ5T5A8 94 aa6.11□□□□□ -1.43
SEMA4B-202ENST00000411539 KRTAP9-8Q9BYQ0 159 aa6.08□□□□□ -1.44
SEMA4B-202ENST00000411539 FSIP2Q5CZC0 6907 aa6.04□□□□□ -1.44
SEMA4B-202ENST00000411539 CRCT1Q9UGL9 99 aa6.03□□□□□ -1.44
SEMA4B-202ENST00000411539 KRTAP4-8A0A0G2JLE6 195 aa5.87□□□□□ -1.47
SEMA4B-202ENST00000411539 KRTAP4-8Q9BYQ9 185 aa5.87□□□□□ -1.47
SEMA4B-202ENST00000411539 KRTAP9-3Q9BYQ3 159 aa5.81□□□□□ -1.48
SEMA4B-202ENST00000411539 KRTAP4-7Q9BYR0 210 aa5.77□□□□□ -1.49
SEMA4B-202ENST00000411539 USH2AO75445 5202 aa5.64□□□□□ -1.51
SEMA4B-202ENST00000411539 LCE2BO14633 110 aa5.61□□□□□ -1.51
SEMA4B-202ENST00000411539 KMT2DO14686 5537 aa5.57□□□□□ -1.52
SEMA4B-202ENST00000411539 KRTAP9-6A8MVA2 160 aa5.56□□□□□ -1.52
SEMA4B-202ENST00000411539 KRTAP12-4P60329 112 aa5.54□□□□□ -1.52
SEMA4B-202ENST00000411539 LCE2AQ5TA79 106 aaPredicted RBP5.53□□□□□ -1.52
SEMA4B-202ENST00000411539 MT1GP13640 62 aa5.47□□□□□ -1.53
SEMA4B-202ENST00000411539 SYNE1Q8NF91 8797 aaKnown RBP5.45□□□□□ -1.54
SEMA4B-202ENST00000411539 MT1LQ93083 61 aa5.45□□□□□ -1.54
SEMA4B-202ENST00000411539 KRTAP19-4Q3LI73 84 aa5.44□□□□□ -1.54
SEMA4B-202ENST00000411539 KRTAP2-3P0C7H8 128 aa5.42□□□□□ -1.54
SEMA4B-202ENST00000411539 KRTAP2-4Q9BYR9 128 aa5.42□□□□□ -1.54
SEMA4B-202ENST00000411539 KRTAP2-1Q9BYU5 128 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms