RNA–Protein interactions for RNA: ENST00000410055.5

PDK1-203, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDK1, Length 2,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-203ENST00000410055 KRTAP21-3Q3LHN1 58 aa8.94□□□□□ -0.98
PDK1-203ENST00000410055 KRTAP15-1Q3LI76 137 aa8.93□□□□□ -0.98
PDK1-203ENST00000410055 H1FX-AS1Q4G0G2 97 aa8.93□□□□□ -0.98
PDK1-203ENST00000410055 LRP1Q07954 4544 aaKnown RBP8.89□□□□□ -0.99
PDK1-203ENST00000410055 MYCBP2O75592 4640 aa8.86□□□□□ -0.99
PDK1-203ENST00000410055 RYR2Q92736 4967 aa8.84□□□□□ -0.99
PDK1-203ENST00000410055 KRTAP3-1Q9BYR8 98 aa8.84□□□□□ -0.99
PDK1-203ENST00000410055 LUZP6Q538Z0 58 aa8.79□□□□□ -1
PDK1-203ENST00000410055 PKHD1L1Q86WI1 4243 aa8.78□□□□□ -1
PDK1-203ENST00000410055 Q5VSD8 79 aa8.76□□□□□ -1.01
PDK1-203ENST00000410055 A0A0D9SG42 100 aa8.76□□□□□ -1.01
PDK1-203ENST00000410055 COX6B2Q6YFQ2 88 aa8.75□□□□□ -1.01
PDK1-203ENST00000410055 FAT3Q8TDW7 4589 aa8.65□□□□□ -1.02
PDK1-203ENST00000410055 HSPG2P98160 4391 aa8.65□□□□□ -1.03
PDK1-203ENST00000410055 RPL37P61927 97 aaKnown RBP8.64□□□□□ -1.03
PDK1-203ENST00000410055 KRTAP10-8P60410 259 aa8.64□□□□□ -1.03
PDK1-203ENST00000410055 KIAA1109Q2LD37 5005 aa8.6□□□□□ -1.03
PDK1-203ENST00000410055 RYR3Q15413 4870 aa8.6□□□□□ -1.03
PDK1-203ENST00000410055 KRTAP17-1Q9BYP8 105 aa8.6□□□□□ -1.03
PDK1-203ENST00000410055 TNXBP22105 4242 aa8.59□□□□□ -1.03
PDK1-203ENST00000410055 XP32Q5T750 250 aa8.56□□□□□ -1.04
PDK1-203ENST00000410055 KRTAP13-4Q3LI77 160 aa8.54□□□□□ -1.04
PDK1-203ENST00000410055 RYR1P21817 5038 aa8.49□□□□□ -1.05
PDK1-203ENST00000410055 LPAP08519 4548 aa8.48□□□□□ -1.05
PDK1-203ENST00000410055 KRTAP3-3Q9BYR6 98 aa8.43□□□□□ -1.06
PDK1-203ENST00000410055 S4R3F8 94 aa8.43□□□□□ -1.06
PDK1-203ENST00000410055 MT1HL1P0DM35 61 aa8.4□□□□□ -1.06
PDK1-203ENST00000410055 LRP2P98164 4655 aa8.39□□□□□ -1.07
PDK1-203ENST00000410055 KRTAP10-6P60371 365 aaPredicted RBP8.36□□□□□ -1.07
PDK1-203ENST00000410055 KRTAP12-2P59991 146 aa8.34□□□□□ -1.08
PDK1-203ENST00000410055 EPPK1P58107 5090 aaKnown RBP8.33□□□□□ -1.08
PDK1-203ENST00000410055 ABCA13Q86UQ4 5058 aa8.29□□□□□ -1.08
PDK1-203ENST00000410055 KRTAP3-2Q9BYR7 98 aa8.28□□□□□ -1.08
PDK1-203ENST00000410055 KRTAP4-5Q9BYR2 181 aa8.24□□□□□ -1.09
PDK1-203ENST00000410055 PLAC4Q8WY50 150 aa8.16□□□□□ -1.1
PDK1-203ENST00000410055 SEC61BP60468 96 aaKnown RBP8.12□□□□□ -1.11
PDK1-203ENST00000410055 KRTAP12-1P59990 96 aa8.12□□□□□ -1.11
PDK1-203ENST00000410055 MUC2Q02817 5179 aa8.03□□□□□ -1.12
PDK1-203ENST00000410055 J3QL48 77 aa8.02□□□□□ -1.13
PDK1-203ENST00000410055 M0QZ58 72 aa7.95□□□□□ -1.14
PDK1-203ENST00000410055 R4GN34 69 aa7.9□□□□□ -1.14
PDK1-203ENST00000410055 KRTAP4-1Q9BYQ7 146 aa7.89□□□□□ -1.15
PDK1-203ENST00000410055 HERC2O95714 4834 aa7.88□□□□□ -1.15
PDK1-203ENST00000410055 LORP23490 312 aaPredicted RBP7.83□□□□□ -1.16
PDK1-203ENST00000410055 MUC17Q685J3 4493 aa7.79□□□□□ -1.16
PDK1-203ENST00000410055 HERC1Q15751 4861 aa7.64□□□□□ -1.19
PDK1-203ENST00000410055 FAT4Q6V0I7 4981 aa7.6□□□□□ -1.19
PDK1-203ENST00000410055 CAMK2N1Q7Z7J9 78 aa7.57□□□□□ -1.2
PDK1-203ENST00000410055 KRTAP19-2Q3LHN2 52 aa7.56□□□□□ -1.2
PDK1-203ENST00000410055 PCLOQ9Y6V0 5065 aa7.52□□□□□ -1.21
PDK1-203ENST00000410055 RNF213Q63HN8 5207 aa7.49□□□□□ -1.21
PDK1-203ENST00000410055 BIRC6Q9NR09 4857 aa7.47□□□□□ -1.21
PDK1-203ENST00000410055 PRO2289Q9P1D8 64 aa7.47□□□□□ -1.21
PDK1-203ENST00000410055 FLGP20930 4061 aaPredicted RBP7.39□□□□□ -1.23
PDK1-203ENST00000410055 PP632Q6XCG6 107 aa7.37□□□□□ -1.23
PDK1-203ENST00000410055 HMCN2Q8NDA2 5059 aa7.32□□□□□ -1.24
PDK1-203ENST00000410055 M0R2T5 61 aa7.32□□□□□ -1.24
PDK1-203ENST00000410055 UBR4Q5T4S7 5183 aa7.3□□□□□ -1.24
PDK1-203ENST00000410055 SPRR5A0A1B0GTR4 108 aa7.21□□□□□ -1.25
PDK1-203ENST00000410055 LCE2CQ5TA81 110 aa7.19□□□□□ -1.26
PDK1-203ENST00000410055 TNP1P09430 55 aa7.14□□□□□ -1.27
PDK1-203ENST00000410055 INE1O15225 51 aa7.07□□□□□ -1.28
PDK1-203ENST00000410055 KRTAP10-10P60014 251 aa7.06□□□□□ -1.28
PDK1-203ENST00000410055 MT1HP80294 61 aa7.05□□□□□ -1.28
PDK1-203ENST00000410055 KRTAP19-1Q8IUB9 90 aa7.03□□□□□ -1.28
PDK1-203ENST00000410055 SPRR2GQ9BYE4 73 aa6.98□□□□□ -1.29
PDK1-203ENST00000410055 MT1FP04733 61 aa6.96□□□□□ -1.29
PDK1-203ENST00000410055 MT2AP02795 61 aa6.93□□□□□ -1.3
PDK1-203ENST00000410055 KRTAP9-8Q9BYQ0 159 aa6.86□□□□□ -1.31
PDK1-203ENST00000410055 LCE3AQ5TA76 89 aa6.8□□□□□ -1.32
PDK1-203ENST00000410055 USH2AO75445 5202 aa6.74□□□□□ -1.33
PDK1-203ENST00000410055 KRTAP23-1A1A580 65 aa6.73□□□□□ -1.33
PDK1-203ENST00000410055 MT1BP07438 61 aa6.66□□□□□ -1.34
PDK1-203ENST00000410055 KRTAP19-8Q3LI54 63 aa6.64□□□□□ -1.35
PDK1-203ENST00000410055 KRTAP10-5P60370 271 aa6.62□□□□□ -1.35
PDK1-203ENST00000410055 MT1XP80297 61 aa6.61□□□□□ -1.35
PDK1-203ENST00000410055 KMT2DO14686 5537 aa6.58□□□□□ -1.36
PDK1-203ENST00000410055 KRTAP9-3Q9BYQ3 159 aa6.55□□□□□ -1.36
PDK1-203ENST00000410055 KRTAP10-7P60409 375 aaPredicted RBP6.52□□□□□ -1.37
PDK1-203ENST00000410055 KRTAP10-12P60413 245 aa6.52□□□□□ -1.37
PDK1-203ENST00000410055 KRTAP8-1Q8IUC2 63 aa6.47□□□□□ -1.37
PDK1-203ENST00000410055 KRTAP12-3P60328 96 aa6.45□□□□□ -1.38
PDK1-203ENST00000410055 FSIP2Q5CZC0 6907 aa6.44□□□□□ -1.38
PDK1-203ENST00000410055 LCE2BO14633 110 aa6.37□□□□□ -1.39
PDK1-203ENST00000410055 KRTAP19-5Q3LI72 72 aa6.22□□□□□ -1.41
PDK1-203ENST00000410055 KRTAP4-8A0A0G2JLE6 195 aa6.22□□□□□ -1.41
PDK1-203ENST00000410055 KRTAP4-8Q9BYQ9 185 aa6.22□□□□□ -1.41
PDK1-203ENST00000410055 LCE2AQ5TA79 106 aaPredicted RBP6.17□□□□□ -1.42
PDK1-203ENST00000410055 LCE3CQ5T5A8 94 aa6.02□□□□□ -1.45
PDK1-203ENST00000410055 KRTAP4-7Q9BYR0 210 aa5.98□□□□□ -1.45
PDK1-203ENST00000410055 SSPOA2VEC9 5147 aa5.9□□□□□ -1.46
PDK1-203ENST00000410055 KRTAP19-7Q3SYF9 63 aa5.88□□□□□ -1.47
PDK1-203ENST00000410055 KRTAP9-6A8MVA2 160 aa5.85□□□□□ -1.47
PDK1-203ENST00000410055 DSTQ03001 7570 aaKnown RBP5.81□□□□□ -1.48
PDK1-203ENST00000410055 MUC12Q9UKN1 5478 aa5.78□□□□□ -1.48
PDK1-203ENST00000410055 FCGBPQ9Y6R7 5405 aaPredicted RBP5.73□□□□□ -1.49
PDK1-203ENST00000410055 KRTAP2-3P0C7H8 128 aa5.73□□□□□ -1.49
PDK1-203ENST00000410055 KRTAP2-4Q9BYR9 128 aa5.73□□□□□ -1.49
PDK1-203ENST00000410055 KRTAP2-1Q9BYU5 128 aa5.73□□□□□ -1.49
PDK1-203ENST00000410055 MT1EP04732 61 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms