RNA–Protein interactions for RNA: ENST00000409776.6

RGPD1-202, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 6,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-202ENST00000409776 KRTAP9-2Q9BYQ4 174 aa1.82□□□□□ -2.12
RGPD1-202ENST00000409776 KRTAP12-3P60328 96 aa1.82□□□□□ -2.12
RGPD1-202ENST00000409776 UTP20O75691 2785 aaKnown RBP1.81□□□□□ -2.12
RGPD1-202ENST00000409776 PRRC2CQ9Y520 2896 aaKnown RBP1.81□□□□□ -2.12
RGPD1-202ENST00000409776 KRTAP10-12P60413 245 aa1.81□□□□□ -2.12
RGPD1-202ENST00000409776 PDZD2O15018 2839 aa1.81□□□□□ -2.12
RGPD1-202ENST00000409776 LPAP08519 4548 aa1.81□□□□□ -2.12
RGPD1-202ENST00000409776 SETD2Q9BYW2 2564 aaPredicted RBP1.8□□□□□ -2.12
RGPD1-202ENST00000409776 GCN1Q92616 2671 aaKnown RBP1.8□□□□□ -2.12
RGPD1-202ENST00000409776 KRTAP1-3Q8IUG1 177 aa1.8□□□□□ -2.12
RGPD1-202ENST00000409776 CENPEQ02224 2701 aa1.8□□□□□ -2.12
RGPD1-202ENST00000409776 IGSF10Q6WRI0 2623 aa1.8□□□□□ -2.12
RGPD1-202ENST00000409776 KRTAP9-3Q9BYQ3 159 aa1.79□□□□□ -2.12
RGPD1-202ENST00000409776 KRTAP1-1Q07627 177 aa1.79□□□□□ -2.12
RGPD1-202ENST00000409776 USP24Q9UPU5 2620 aa1.79□□□□□ -2.12
RGPD1-202ENST00000409776 NOTCH1P46531 2555 aa1.78□□□□□ -2.12
RGPD1-202ENST00000409776 FAT3Q8TDW7 4589 aa1.77□□□□□ -2.13
RGPD1-202ENST00000409776 UNC79Q9P2D8 2635 aa1.77□□□□□ -2.13
RGPD1-202ENST00000409776 ANKRD17O75179 2603 aaKnown RBP1.77□□□□□ -2.13
RGPD1-202ENST00000409776 KRTAP4-8A0A0G2JLE6 195 aa1.76□□□□□ -2.13
RGPD1-202ENST00000409776 FBN2P35556 2912 aa1.76□□□□□ -2.13
RGPD1-202ENST00000409776 LCE5AQ5TCM9 118 aa1.76□□□□□ -2.13
RGPD1-202ENST00000409776 PIEZO2Q9H5I5 2752 aa1.76□□□□□ -2.13
RGPD1-202ENST00000409776 MGAM2Q2M2H8 2515 aa1.75□□□□□ -2.13
RGPD1-202ENST00000409776 TEX15Q9BXT5 2789 aa1.75□□□□□ -2.13
RGPD1-202ENST00000409776 DNAH11Q96DT5 4516 aa1.74□□□□□ -2.13
RGPD1-202ENST00000409776 FLGP20930 4061 aaPredicted RBP1.74□□□□□ -2.13
RGPD1-202ENST00000409776 NIPBLQ6KC79 2804 aaeCLIP1.74□□□□□ -2.13
RGPD1-202ENST00000409776 FLNBO75369 2602 aaKnown RBP1.74□□□□□ -2.13
RGPD1-202ENST00000409776 MAST4O15021 2626 aa1.74□□□□□ -2.13
RGPD1-202ENST00000409776 ITPR2Q14571 2701 aa1.74□□□□□ -2.13
RGPD1-202ENST00000409776 KRTAP4-7Q9BYR0 210 aa1.74□□□□□ -2.13
RGPD1-202ENST00000409776 HRNRQ86YZ3 2850 aaPredicted RBP1.73□□□□□ -2.13
RGPD1-202ENST00000409776 PKD1L1Q8TDX9 2849 aa1.71□□□□□ -2.14
RGPD1-202ENST00000409776 LCE3AQ5TA76 89 aa1.71□□□□□ -2.14
RGPD1-202ENST00000409776 KMT2CQ8NEZ4 4911 aaKnown RBP1.71□□□□□ -2.14
RGPD1-202ENST00000409776 MXRA5Q9NR99 2828 aa1.71□□□□□ -2.14
RGPD1-202ENST00000409776 MAP1AP78559 2803 aaPredicted RBP1.71□□□□□ -2.14
RGPD1-202ENST00000409776 RYR3Q15413 4870 aa1.71□□□□□ -2.14
RGPD1-202ENST00000409776 ZANQ9Y493 2812 aa1.7□□□□□ -2.14
RGPD1-202ENST00000409776 PCLOQ9Y6V0 5065 aa1.7□□□□□ -2.14
RGPD1-202ENST00000409776 VWFP04275 2813 aa1.7□□□□□ -2.14
RGPD1-202ENST00000409776 STAB1Q9NY15 2570 aa1.69□□□□□ -2.14
RGPD1-202ENST00000409776 APCP25054 2843 aa1.69□□□□□ -2.14
RGPD1-202ENST00000409776 ATRQ13535 2644 aa1.67□□□□□ -2.14
RGPD1-202ENST00000409776 KRTAP1-4P0C5Y4 121 aa1.67□□□□□ -2.14
RGPD1-202ENST00000409776 HYDINQ4G0P3 5121 aa1.67□□□□□ -2.14
RGPD1-202ENST00000409776 SACSQ9NZJ4 4579 aa1.67□□□□□ -2.14
RGPD1-202ENST00000409776 MEGF8Q7Z7M0 2845 aa1.66□□□□□ -2.14
RGPD1-202ENST00000409776 NSD1Q96L73 2696 aaPredicted RBP1.65□□□□□ -2.14
RGPD1-202ENST00000409776 TENM1Q9UKZ4 2725 aa1.65□□□□□ -2.14
RGPD1-202ENST00000409776 KRTAP5-3Q6L8H2 238 aa1.65□□□□□ -2.14
RGPD1-202ENST00000409776 FLNAP21333 2647 aaKnown RBP1.65□□□□□ -2.15
RGPD1-202ENST00000409776 KRTAP4-9Q9BYQ8 210 aa1.65□□□□□ -2.15
RGPD1-202ENST00000409776 HIVEP1P15822 2718 aa1.65□□□□□ -2.15
RGPD1-202ENST00000409776 KRTAP9-8Q9BYQ0 159 aa1.65□□□□□ -2.15
RGPD1-202ENST00000409776 COL6A5A8TX70 2615 aa1.64□□□□□ -2.15
RGPD1-202ENST00000409776 KRTAP4-2Q9BYR5 136 aa1.64□□□□□ -2.15
RGPD1-202ENST00000409776 NBEAL1Q6ZS30 2694 aa1.63□□□□□ -2.15
RGPD1-202ENST00000409776 ITPR3Q14573 2671 aa1.62□□□□□ -2.15
RGPD1-202ENST00000409776 EPPK1P58107 5090 aaKnown RBP1.61□□□□□ -2.15
RGPD1-202ENST00000409776 LCE3CQ5T5A8 94 aa1.61□□□□□ -2.15
RGPD1-202ENST00000409776 LCE1DQ5T752 114 aa1.61□□□□□ -2.15
RGPD1-202ENST00000409776 RYR2Q92736 4967 aa1.6□□□□□ -2.15
RGPD1-202ENST00000409776 DNAH5Q8TE73 4624 aa1.59□□□□□ -2.15
RGPD1-202ENST00000409776 KRTAP12-4P60329 112 aa1.59□□□□□ -2.15
RGPD1-202ENST00000409776 LCE1AQ5T7P2 110 aa1.59□□□□□ -2.15
RGPD1-202ENST00000409776 TENM2Q9NT68 2774 aa1.59□□□□□ -2.16
RGPD1-202ENST00000409776 KRTAP8-1Q8IUC2 63 aa1.58□□□□□ -2.16
RGPD1-202ENST00000409776 FBN3Q75N90 2809 aa1.58□□□□□ -2.16
RGPD1-202ENST00000409776 HERC1Q15751 4861 aa1.57□□□□□ -2.16
RGPD1-202ENST00000409776 STARD9Q9P2P6 4700 aa1.57□□□□□ -2.16
RGPD1-202ENST00000409776 LRP1BQ9NZR2 4599 aa1.56□□□□□ -2.16
RGPD1-202ENST00000409776 RYR1P21817 5038 aa1.56□□□□□ -2.16
RGPD1-202ENST00000409776 LCE3BQ5TA77 95 aa1.56□□□□□ -2.16
RGPD1-202ENST00000409776 TEP1Q99973 2627 aaKnown RBP1.54□□□□□ -2.16
RGPD1-202ENST00000409776 TGP01266 2768 aa1.53□□□□□ -2.16
RGPD1-202ENST00000409776 APOBP04114 4563 aaKnown RBP1.53□□□□□ -2.16
RGPD1-202ENST00000409776 LRP1Q07954 4544 aaKnown RBP1.53□□□□□ -2.16
RGPD1-202ENST00000409776 ABCA13Q86UQ4 5058 aa1.52□□□□□ -2.17
RGPD1-202ENST00000409776 LCE3EQ5T5B0 92 aa1.52□□□□□ -2.17
RGPD1-202ENST00000409776 KRTAP4-11Q9BYQ6 195 aa1.52□□□□□ -2.17
RGPD1-202ENST00000409776 KRTAP4-5Q9BYR2 181 aa1.52□□□□□ -2.17
RGPD1-202ENST00000409776 PLECQ15149 4684 aaKnown RBP1.52□□□□□ -2.17
RGPD1-202ENST00000409776 LCE3DQ9BYE3 92 aa1.5□□□□□ -2.17
RGPD1-202ENST00000409776 KRTAP5-2Q701N4 177 aa1.5□□□□□ -2.17
RGPD1-202ENST00000409776 DYNC1H1Q14204 4646 aaKnown RBP1.49□□□□□ -2.17
RGPD1-202ENST00000409776 MUC5BQ9HC84 5762 aaPredicted RBP1.49□□□□□ -2.17
RGPD1-202ENST00000409776 HERC2O95714 4834 aa1.48□□□□□ -2.17
RGPD1-202ENST00000409776 FAT1Q14517 4588 aa1.48□□□□□ -2.17
RGPD1-202ENST00000409776 SPRR2GQ9BYE4 73 aa1.47□□□□□ -2.17
RGPD1-202ENST00000409776 KIAA1109Q2LD37 5005 aa1.47□□□□□ -2.17
RGPD1-202ENST00000409776 UBR4Q5T4S7 5183 aa1.47□□□□□ -2.17
RGPD1-202ENST00000409776 KMT2DO14686 5537 aa1.47□□□□□ -2.17
RGPD1-202ENST00000409776 PRM1P04553 51 aa1.45□□□□□ -2.18
RGPD1-202ENST00000409776 RNF213Q63HN8 5207 aa1.45□□□□□ -2.18
RGPD1-202ENST00000409776 NBEAL2Q6ZNJ1 2754 aa1.44□□□□□ -2.18
RGPD1-202ENST00000409776 MUC17Q685J3 4493 aa1.43□□□□□ -2.18
RGPD1-202ENST00000409776 BIRC6Q9NR09 4857 aa1.43□□□□□ -2.18
RGPD1-202ENST00000409776 TENM3Q9P273 2699 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms