RNA–Protein interactions for RNA: ENST00000409767.5

PBRM1-207, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-207ENST00000409767 DYNC1H1Q14204 4646 aaKnown RBP3.07□□□□□ -1.92
PBRM1-207ENST00000409767 CSMD3Q7Z407 3707 aa3.06□□□□□ -1.92
PBRM1-207ENST00000409767 RYR3Q15413 4870 aa3.06□□□□□ -1.92
PBRM1-207ENST00000409767 KIAA1109Q2LD37 5005 aa3.06□□□□□ -1.92
PBRM1-207ENST00000409767 VPS13DQ5THJ4 4388 aa3.05□□□□□ -1.92
PBRM1-207ENST00000409767 DNAH3Q8TD57 4116 aa3.04□□□□□ -1.92
PBRM1-207ENST00000409767 STARD9Q9P2P6 4700 aa3.04□□□□□ -1.92
PBRM1-207ENST00000409767 RYR1P21817 5038 aa3.04□□□□□ -1.92
PBRM1-207ENST00000409767 KRTAP3-1Q9BYR8 98 aa3□□□□□ -1.93
PBRM1-207ENST00000409767 C10orf95Q9H7T3 257 aa2.99□□□□□ -1.93
PBRM1-207ENST00000409767 SACSQ9NZJ4 4579 aa2.99□□□□□ -1.93
PBRM1-207ENST00000409767 CMYA5Q8N3K9 4069 aa2.99□□□□□ -1.93
PBRM1-207ENST00000409767 LRP1BQ9NZR2 4599 aa2.98□□□□□ -1.93
PBRM1-207ENST00000409767 HERC2O95714 4834 aa2.98□□□□□ -1.93
PBRM1-207ENST00000409767 DNAH17Q9UFH2 4485 aa2.98□□□□□ -1.93
PBRM1-207ENST00000409767 FAT2Q9NYQ8 4349 aa2.97□□□□□ -1.93
PBRM1-207ENST00000409767 KRTAP13-4Q3LI77 160 aa2.96□□□□□ -1.94
PBRM1-207ENST00000409767 LYSTQ99698 3801 aa2.96□□□□□ -1.94
PBRM1-207ENST00000409767 DNAH6Q9C0G6 4158 aa2.94□□□□□ -1.94
PBRM1-207ENST00000409767 KRTAP12-1P59990 96 aa2.93□□□□□ -1.94
PBRM1-207ENST00000409767 KRTAP12-2P59991 146 aa2.92□□□□□ -1.94
PBRM1-207ENST00000409767 KMT2CQ8NEZ4 4911 aaKnown RBP2.91□□□□□ -1.94
PBRM1-207ENST00000409767 FAT1Q14517 4588 aa2.9□□□□□ -1.95
PBRM1-207ENST00000409767 KRTAP10-6P60371 365 aaPredicted RBP2.9□□□□□ -1.95
PBRM1-207ENST00000409767 MT1HP80294 61 aa2.89□□□□□ -1.95
PBRM1-207ENST00000409767 DNAH2Q9P225 4427 aa2.87□□□□□ -1.95
PBRM1-207ENST00000409767 PCLOQ9Y6V0 5065 aa2.86□□□□□ -1.95
PBRM1-207ENST00000409767 DNAH8Q96JB1 4490 aa2.86□□□□□ -1.95
PBRM1-207ENST00000409767 DNAH7Q8WXX0 4024 aa2.85□□□□□ -1.95
PBRM1-207ENST00000409767 HYDINQ4G0P3 5121 aa2.85□□□□□ -1.95
PBRM1-207ENST00000409767 EPPK1P58107 5090 aaKnown RBP2.85□□□□□ -1.95
PBRM1-207ENST00000409767 KRTAP4-1Q9BYQ7 146 aa2.85□□□□□ -1.95
PBRM1-207ENST00000409767 APOBP04114 4563 aaKnown RBP2.84□□□□□ -1.95
PBRM1-207ENST00000409767 KRTAP3-3Q9BYR6 98 aa2.84□□□□□ -1.96
PBRM1-207ENST00000409767 KMT2AQ03164 3969 aa2.83□□□□□ -1.96
PBRM1-207ENST00000409767 KRTAP3-2Q9BYR7 98 aa2.81□□□□□ -1.96
PBRM1-207ENST00000409767 KRTAP9-2Q9BYQ4 174 aa2.81□□□□□ -1.96
PBRM1-207ENST00000409767 HSPG2P98160 4391 aa2.8□□□□□ -1.96
PBRM1-207ENST00000409767 HERC1Q15751 4861 aa2.8□□□□□ -1.96
PBRM1-207ENST00000409767 CRCT1Q9UGL9 99 aa2.79□□□□□ -1.96
PBRM1-207ENST00000409767 HECTD4Q9Y4D8 3996 aa2.78□□□□□ -1.96
PBRM1-207ENST00000409767 KRTAP9-6A0A140TA67 174 aa2.78□□□□□ -1.96
PBRM1-207ENST00000409767 KRTAP15-1Q3LI76 137 aa2.78□□□□□ -1.96
PBRM1-207ENST00000409767 ABCA13Q86UQ4 5058 aa2.78□□□□□ -1.97
PBRM1-207ENST00000409767 KRTAP10-12P60413 245 aa2.77□□□□□ -1.97
PBRM1-207ENST00000409767 KRTAP23-1A1A580 65 aa2.76□□□□□ -1.97
PBRM1-207ENST00000409767 LORP23490 312 aaPredicted RBP2.76□□□□□ -1.97
PBRM1-207ENST00000409767 MT2AP02795 61 aa2.75□□□□□ -1.97
PBRM1-207ENST00000409767 PKHD1L1Q86WI1 4243 aa2.74□□□□□ -1.97
PBRM1-207ENST00000409767 MYCBP2O75592 4640 aa2.74□□□□□ -1.97
PBRM1-207ENST00000409767 FAT3Q8TDW7 4589 aa2.73□□□□□ -1.97
PBRM1-207ENST00000409767 VPS13BQ7Z7G8 4022 aa2.72□□□□□ -1.97
PBRM1-207ENST00000409767 LCE2DQ5TA82 110 aaPredicted RBP2.71□□□□□ -1.98
PBRM1-207ENST00000409767 FRAS1Q86XX4 4008 aa2.7□□□□□ -1.98
PBRM1-207ENST00000409767 LRP1Q07954 4544 aaKnown RBP2.68□□□□□ -1.98
PBRM1-207ENST00000409767 MT1FP04733 61 aa2.68□□□□□ -1.98
PBRM1-207ENST00000409767 KRTAP12-3P60328 96 aa2.66□□□□□ -1.98
PBRM1-207ENST00000409767 KRTAP8-1Q8IUC2 63 aa2.66□□□□□ -1.98
PBRM1-207ENST00000409767 LCE2AQ5TA79 106 aaPredicted RBP2.66□□□□□ -1.98
PBRM1-207ENST00000409767 PKD1P98161 4303 aa2.66□□□□□ -1.98
PBRM1-207ENST00000409767 PKHD1P08F94 4074 aa2.65□□□□□ -1.99
PBRM1-207ENST00000409767 SPRR2GQ9BYE4 73 aa2.64□□□□□ -1.99
PBRM1-207ENST00000409767 LCE2CQ5TA81 110 aa2.63□□□□□ -1.99
PBRM1-207ENST00000409767 LRP2P98164 4655 aa2.62□□□□□ -1.99
PBRM1-207ENST00000409767 INE1O15225 51 aa2.59□□□□□ -1.99
PBRM1-207ENST00000409767 KRTAP19-1Q8IUB9 90 aa2.59□□□□□ -1.99
PBRM1-207ENST00000409767 LCE3AQ5TA76 89 aa2.59□□□□□ -1.99
PBRM1-207ENST00000409767 KRTAP9-8Q9BYQ0 159 aa2.58□□□□□ -2
PBRM1-207ENST00000409767 RNF213Q63HN8 5207 aa2.58□□□□□ -2
PBRM1-207ENST00000409767 SPRR2FQ96RM1 72 aa2.57□□□□□ -2
PBRM1-207ENST00000409767 UBR4Q5T4S7 5183 aa2.57□□□□□ -2
PBRM1-207ENST00000409767 KRTAP19-4Q3LI73 84 aa2.56□□□□□ -2
PBRM1-207ENST00000409767 HMCN2Q8NDA2 5059 aa2.54□□□□□ -2
PBRM1-207ENST00000409767 KRTAP9-7A8MTY7 169 aa2.53□□□□□ -2
PBRM1-207ENST00000409767 KRTAP9-3Q9BYQ3 159 aa2.53□□□□□ -2
PBRM1-207ENST00000409767 TNXBP22105 4242 aa2.53□□□□□ -2
PBRM1-207ENST00000409767 KRTAP19-2Q3LHN2 52 aa2.52□□□□□ -2.01
PBRM1-207ENST00000409767 SPRR2EP22531 72 aa2.51□□□□□ -2.01
PBRM1-207ENST00000409767 SPRR2BP35325 72 aa2.51□□□□□ -2.01
PBRM1-207ENST00000409767 SPRR2AP35326 72 aa2.51□□□□□ -2.01
PBRM1-207ENST00000409767 KRTAP19-8Q3LI54 63 aa2.51□□□□□ -2.01
PBRM1-207ENST00000409767 KRTAP10-5P60370 271 aa2.5□□□□□ -2.01
PBRM1-207ENST00000409767 KRTAP19-6Q3LI70 58 aa2.47□□□□□ -2.01
PBRM1-207ENST00000409767 LCE2BO14633 110 aa2.46□□□□□ -2.02
PBRM1-207ENST00000409767 FAT4Q6V0I7 4981 aa2.46□□□□□ -2.02
PBRM1-207ENST00000409767 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.45□□□□□ -2.02
PBRM1-207ENST00000409767 SPRR2DP22532 72 aa2.45□□□□□ -2.02
PBRM1-207ENST00000409767 KRTAP10-7P60409 375 aaPredicted RBP2.43□□□□□ -2.02
PBRM1-207ENST00000409767 LPAP08519 4548 aa2.43□□□□□ -2.02
PBRM1-207ENST00000409767 MUC17Q685J3 4493 aa2.42□□□□□ -2.02
PBRM1-207ENST00000409767 MT1BP07438 61 aa2.41□□□□□ -2.02
PBRM1-207ENST00000409767 KRTAP6-3Q3LI67 103 aa2.41□□□□□ -2.02
PBRM1-207ENST00000409767 KRTAP20-1Q3LI63 56 aa2.39□□□□□ -2.03
PBRM1-207ENST00000409767 KRTAP19-5Q3LI72 72 aa2.39□□□□□ -2.03
PBRM1-207ENST00000409767 FSIP2Q5CZC0 6907 aa2.34□□□□□ -2.03
PBRM1-207ENST00000409767 MT1XP80297 61 aa2.34□□□□□ -2.04
PBRM1-207ENST00000409767 LCE3CQ5T5A8 94 aa2.34□□□□□ -2.04
PBRM1-207ENST00000409767 FLGP20930 4061 aaPredicted RBP2.31□□□□□ -2.04
PBRM1-207ENST00000409767 KRTAP2-3P0C7H8 128 aa2.3□□□□□ -2.04
PBRM1-207ENST00000409767 KRTAP2-4Q9BYR9 128 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms