RNA–Protein interactions for RNA: ENST00000407008.7

NLK-201, Transcript of nemo like kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLK, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLK-201ENST00000407008 DNAH5Q8TE73 4624 aa4.32□□□□□ -1.72
NLK-201ENST00000407008 HECTD4Q9Y4D8 3996 aa4.29□□□□□ -1.72
NLK-201ENST00000407008 FRAS1Q86XX4 4008 aa4.28□□□□□ -1.72
NLK-201ENST00000407008 PLAC4Q8WY50 150 aa4.28□□□□□ -1.72
NLK-201ENST00000407008 M0QZ58 72 aa4.27□□□□□ -1.73
NLK-201ENST00000407008 H0YAA0 97 aa4.27□□□□□ -1.73
NLK-201ENST00000407008 DYNC1H1Q14204 4646 aaKnown RBP4.26□□□□□ -1.73
NLK-201ENST00000407008 LRP1BQ9NZR2 4599 aa4.24□□□□□ -1.73
NLK-201ENST00000407008 DNAH8Q96JB1 4490 aa4.24□□□□□ -1.73
NLK-201ENST00000407008 FAT2Q9NYQ8 4349 aa4.23□□□□□ -1.73
NLK-201ENST00000407008 HYDINQ4G0P3 5121 aa4.23□□□□□ -1.73
NLK-201ENST00000407008 PKD1P98161 4303 aa4.22□□□□□ -1.73
NLK-201ENST00000407008 SACSQ9NZJ4 4579 aa4.22□□□□□ -1.73
NLK-201ENST00000407008 KRTAP4-5Q9BYR2 181 aa4.21□□□□□ -1.74
NLK-201ENST00000407008 C10orf95Q9H7T3 257 aa4.14□□□□□ -1.75
NLK-201ENST00000407008 RYR2Q92736 4967 aa4.14□□□□□ -1.75
NLK-201ENST00000407008 KRTAP3-1Q9BYR8 98 aa4.14□□□□□ -1.75
NLK-201ENST00000407008 FAT1Q14517 4588 aa4.12□□□□□ -1.75
NLK-201ENST00000407008 LCE2DQ5TA82 110 aaPredicted RBP4.1□□□□□ -1.75
NLK-201ENST00000407008 PKHD1P08F94 4074 aa4.07□□□□□ -1.76
NLK-201ENST00000407008 APOBP04114 4563 aaKnown RBP4.07□□□□□ -1.76
NLK-201ENST00000407008 VPS13BQ7Z7G8 4022 aa4.07□□□□□ -1.76
NLK-201ENST00000407008 KMT2CQ8NEZ4 4911 aaKnown RBP4.07□□□□□ -1.76
NLK-201ENST00000407008 RYR1P21817 5038 aa4.05□□□□□ -1.76
NLK-201ENST00000407008 KIAA1109Q2LD37 5005 aa4.03□□□□□ -1.76
NLK-201ENST00000407008 RYR3Q15413 4870 aa4.02□□□□□ -1.77
NLK-201ENST00000407008 KRTAP17-1Q9BYP8 105 aa4.01□□□□□ -1.77
NLK-201ENST00000407008 KRTAP10-10P60014 251 aa4□□□□□ -1.77
NLK-201ENST00000407008 TNP1P09430 55 aa3.99□□□□□ -1.77
NLK-201ENST00000407008 PKHD1L1Q86WI1 4243 aa3.97□□□□□ -1.77
NLK-201ENST00000407008 PRO2289Q9P1D8 64 aa3.97□□□□□ -1.77
NLK-201ENST00000407008 KRTAP3-3Q9BYR6 98 aa3.96□□□□□ -1.78
NLK-201ENST00000407008 KRTAP10-6P60371 365 aaPredicted RBP3.94□□□□□ -1.78
NLK-201ENST00000407008 HSPG2P98160 4391 aa3.93□□□□□ -1.78
NLK-201ENST00000407008 KRTAP3-2Q9BYR7 98 aa3.92□□□□□ -1.78
NLK-201ENST00000407008 BIRC6Q9NR09 4857 aa3.89□□□□□ -1.79
NLK-201ENST00000407008 PP632Q6XCG6 107 aa3.88□□□□□ -1.79
NLK-201ENST00000407008 LRP1Q07954 4544 aaKnown RBP3.88□□□□□ -1.79
NLK-201ENST00000407008 FAT3Q8TDW7 4589 aa3.85□□□□□ -1.79
NLK-201ENST00000407008 KRTAP4-1Q9BYQ7 146 aa3.84□□□□□ -1.79
NLK-201ENST00000407008 TNXBP22105 4242 aa3.83□□□□□ -1.8
NLK-201ENST00000407008 EPPK1P58107 5090 aaKnown RBP3.83□□□□□ -1.8
NLK-201ENST00000407008 KRTAP12-1P59990 96 aa3.82□□□□□ -1.8
NLK-201ENST00000407008 KRTAP13-4Q3LI77 160 aa3.82□□□□□ -1.8
NLK-201ENST00000407008 HERC2O95714 4834 aa3.81□□□□□ -1.8
NLK-201ENST00000407008 KRTAP12-2P59991 146 aa3.79□□□□□ -1.8
NLK-201ENST00000407008 MYCBP2O75592 4640 aa3.76□□□□□ -1.81
NLK-201ENST00000407008 LCE2AQ5TA79 106 aaPredicted RBP3.74□□□□□ -1.81
NLK-201ENST00000407008 MT1HP80294 61 aa3.69□□□□□ -1.82
NLK-201ENST00000407008 LCE2CQ5TA81 110 aa3.68□□□□□ -1.82
NLK-201ENST00000407008 LRP2P98164 4655 aa3.64□□□□□ -1.83
NLK-201ENST00000407008 LCE2BO14633 110 aa3.64□□□□□ -1.83
NLK-201ENST00000407008 ABCA13Q86UQ4 5058 aa3.64□□□□□ -1.83
NLK-201ENST00000407008 LORP23490 312 aaPredicted RBP3.63□□□□□ -1.83
NLK-201ENST00000407008 HERC1Q15751 4861 aa3.62□□□□□ -1.83
NLK-201ENST00000407008 SPRR2GQ9BYE4 73 aa3.6□□□□□ -1.83
NLK-201ENST00000407008 MT2AP02795 61 aa3.59□□□□□ -1.83
NLK-201ENST00000407008 INE1O15225 51 aa3.57□□□□□ -1.84
NLK-201ENST00000407008 KRTAP19-2Q3LHN2 52 aa3.57□□□□□ -1.84
NLK-201ENST00000407008 KRTAP23-1A1A580 65 aa3.56□□□□□ -1.84
NLK-201ENST00000407008 MT1FP04733 61 aa3.53□□□□□ -1.84
NLK-201ENST00000407008 LPAP08519 4548 aa3.52□□□□□ -1.85
NLK-201ENST00000407008 PCLOQ9Y6V0 5065 aa3.52□□□□□ -1.85
NLK-201ENST00000407008 MUC17Q685J3 4493 aa3.49□□□□□ -1.85
NLK-201ENST00000407008 SPRR5A0A1B0GTR4 108 aa3.46□□□□□ -1.86
NLK-201ENST00000407008 KRTAP19-8Q3LI54 63 aa3.46□□□□□ -1.86
NLK-201ENST00000407008 KRTAP19-1Q8IUB9 90 aa3.45□□□□□ -1.86
NLK-201ENST00000407008 KRTAP9-8Q9BYQ0 159 aa3.45□□□□□ -1.86
NLK-201ENST00000407008 KRTAP10-12P60413 245 aa3.44□□□□□ -1.86
NLK-201ENST00000407008 HMCN2Q8NDA2 5059 aa3.42□□□□□ -1.86
NLK-201ENST00000407008 FLGP20930 4061 aaPredicted RBP3.41□□□□□ -1.86
NLK-201ENST00000407008 KRTAP9-3Q9BYQ3 159 aa3.35□□□□□ -1.87
NLK-201ENST00000407008 LCE3AQ5TA76 89 aa3.33□□□□□ -1.88
NLK-201ENST00000407008 MT1BP07438 61 aa3.32□□□□□ -1.88
NLK-201ENST00000407008 RNF213Q63HN8 5207 aa3.31□□□□□ -1.88
NLK-201ENST00000407008 KRTAP12-3P60328 96 aa3.31□□□□□ -1.88
NLK-201ENST00000407008 FAT4Q6V0I7 4981 aa3.27□□□□□ -1.89
NLK-201ENST00000407008 KRTAP10-5P60370 271 aa3.26□□□□□ -1.89
NLK-201ENST00000407008 MT1XP80297 61 aa3.26□□□□□ -1.89
NLK-201ENST00000407008 KRTAP8-1Q8IUC2 63 aa3.25□□□□□ -1.89
NLK-201ENST00000407008 MUC2Q02817 5179 aa3.25□□□□□ -1.89
NLK-201ENST00000407008 UBR4Q5T4S7 5183 aa3.22□□□□□ -1.89
NLK-201ENST00000407008 KRTAP19-4Q3LI73 84 aa3.18□□□□□ -1.9
NLK-201ENST00000407008 KRTAP10-7P60409 375 aaPredicted RBP3.15□□□□□ -1.9
NLK-201ENST00000407008 KRTAP19-5Q3LI72 72 aa3.1□□□□□ -1.91
NLK-201ENST00000407008 KRTAP19-6Q3LI70 58 aa3.09□□□□□ -1.91
NLK-201ENST00000407008 CRCT1Q9UGL9 99 aa3.05□□□□□ -1.92
NLK-201ENST00000407008 SPRR2FQ96RM1 72 aa3.04□□□□□ -1.92
NLK-201ENST00000407008 LCE3CQ5T5A8 94 aa3□□□□□ -1.93
NLK-201ENST00000407008 KRTAP4-8A0A0G2JLE6 195 aa2.97□□□□□ -1.93
NLK-201ENST00000407008 KRTAP4-8Q9BYQ9 185 aa2.97□□□□□ -1.93
NLK-201ENST00000407008 KRTAP9-2Q9BYQ4 174 aa2.97□□□□□ -1.93
NLK-201ENST00000407008 MT1GP13640 62 aa2.91□□□□□ -1.94
NLK-201ENST00000407008 MT1EP04732 61 aa2.9□□□□□ -1.94
NLK-201ENST00000407008 SPRR2EP22531 72 aa2.88□□□□□ -1.95
NLK-201ENST00000407008 SPRR2BP35325 72 aa2.88□□□□□ -1.95
NLK-201ENST00000407008 SPRR2AP35326 72 aa2.88□□□□□ -1.95
NLK-201ENST00000407008 MT1LQ93083 61 aa2.87□□□□□ -1.95
NLK-201ENST00000407008 KRTAP19-3Q7Z4W3 81 aa2.86□□□□□ -1.95
NLK-201ENST00000407008 KRTAP19-7Q3SYF9 63 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms