RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 MIR22HGQ0VDD5 57 aa8.87□□□□□ -0.99
DNMT3A-205ENST00000402667 XP32Q5T750 250 aa8.87□□□□□ -0.99
DNMT3A-205ENST00000402667 RBM12B-AS1Q9P1G2 102 aa8.83□□□□□ -1
DNMT3A-205ENST00000402667 BIRC6Q9NR09 4857 aa8.77□□□□□ -1.01
DNMT3A-205ENST00000402667 PRAC1Q96KF2 57 aa8.71□□□□□ -1.02
DNMT3A-205ENST00000402667 ADM2Q7Z4H4 148 aa8.7□□□□□ -1.02
DNMT3A-205ENST00000402667 A0A1B0GU33 70 aa8.68□□□□□ -1.02
DNMT3A-205ENST00000402667 H0YAA0 97 aa8.66□□□□□ -1.02
DNMT3A-205ENST00000402667 H1FX-AS1Q4G0G2 97 aa8.65□□□□□ -1.03
DNMT3A-205ENST00000402667 KRTAP3-3Q9BYR6 98 aa8.65□□□□□ -1.03
DNMT3A-205ENST00000402667 TPRXLQ17RH7 258 aa8.62□□□□□ -1.03
DNMT3A-205ENST00000402667 KRTAP4-5Q9BYR2 181 aa8.62□□□□□ -1.03
DNMT3A-205ENST00000402667 LRP2P98164 4655 aa8.61□□□□□ -1.03
DNMT3A-205ENST00000402667 S4R3F8 94 aa8.58□□□□□ -1.04
DNMT3A-205ENST00000402667 LPAP08519 4548 aa8.57□□□□□ -1.04
DNMT3A-205ENST00000402667 HERC2O95714 4834 aa8.55□□□□□ -1.04
DNMT3A-205ENST00000402667 ABCA13Q86UQ4 5058 aa8.54□□□□□ -1.04
DNMT3A-205ENST00000402667 KRTAP10-6P60371 365 aaPredicted RBP8.51□□□□□ -1.05
DNMT3A-205ENST00000402667 KRTAP3-2Q9BYR7 98 aa8.47□□□□□ -1.05
DNMT3A-205ENST00000402667 CSAG1Q6PB30 78 aa8.44□□□□□ -1.06
DNMT3A-205ENST00000402667 PCLOQ9Y6V0 5065 aa8.41□□□□□ -1.06
DNMT3A-205ENST00000402667 KRTAP13-4Q3LI77 160 aa8.38□□□□□ -1.07
DNMT3A-205ENST00000402667 LINC01554Q52M75 96 aa8.38□□□□□ -1.07
DNMT3A-205ENST00000402667 P0C880 135 aa8.36□□□□□ -1.07
DNMT3A-205ENST00000402667 J3QL48 77 aa8.32□□□□□ -1.08
DNMT3A-205ENST00000402667 K7ERS5 55 aa8.32□□□□□ -1.08
DNMT3A-205ENST00000402667 SEC61BP60468 96 aaKnown RBP8.3□□□□□ -1.08
DNMT3A-205ENST00000402667 A0A0D9SG42 100 aa8.28□□□□□ -1.08
DNMT3A-205ENST00000402667 MUC17Q685J3 4493 aa8.25□□□□□ -1.09
DNMT3A-205ENST00000402667 KRTAP25-1Q3LHN0 102 aa8.2□□□□□ -1.1
DNMT3A-205ENST00000402667 KRTAP4-1Q9BYQ7 146 aa8.2□□□□□ -1.1
DNMT3A-205ENST00000402667 CRIPTQ9P021 101 aa8.14□□□□□ -1.11
DNMT3A-205ENST00000402667 HERC1Q15751 4861 aa8.13□□□□□ -1.11
DNMT3A-205ENST00000402667 ROMO1P60602 79 aa8.11□□□□□ -1.11
DNMT3A-205ENST00000402667 M0QZ58 72 aa8.1□□□□□ -1.11
DNMT3A-205ENST00000402667 KRTAP12-2P59991 146 aa8.08□□□□□ -1.12
DNMT3A-205ENST00000402667 KRTAP12-1P59990 96 aa8.05□□□□□ -1.12
DNMT3A-205ENST00000402667 KRTAP19-2Q3LHN2 52 aa8.04□□□□□ -1.12
DNMT3A-205ENST00000402667 SPINT4Q6UDR6 99 aa8.02□□□□□ -1.13
DNMT3A-205ENST00000402667 R4GN34 69 aa7.95□□□□□ -1.14
DNMT3A-205ENST00000402667 MUC2Q02817 5179 aa7.92□□□□□ -1.14
DNMT3A-205ENST00000402667 LORP23490 312 aaPredicted RBP7.91□□□□□ -1.14
DNMT3A-205ENST00000402667 HMCN2Q8NDA2 5059 aa7.87□□□□□ -1.15
DNMT3A-205ENST00000402667 H3BS24 57 aa7.86□□□□□ -1.15
DNMT3A-205ENST00000402667 C10orf95Q9H7T3 257 aa7.85□□□□□ -1.15
DNMT3A-205ENST00000402667 FLGP20930 4061 aaPredicted RBP7.83□□□□□ -1.16
DNMT3A-205ENST00000402667 UBR4Q5T4S7 5183 aa7.65□□□□□ -1.19
DNMT3A-205ENST00000402667 LCE2CQ5TA81 110 aa7.64□□□□□ -1.19
DNMT3A-205ENST00000402667 FAT4Q6V0I7 4981 aa7.59□□□□□ -1.19
DNMT3A-205ENST00000402667 RNF213Q63HN8 5207 aa7.52□□□□□ -1.21
DNMT3A-205ENST00000402667 CAMK2N1Q7Z7J9 78 aa7.51□□□□□ -1.21
DNMT3A-205ENST00000402667 KRTAP15-1Q3LI76 137 aa7.47□□□□□ -1.21
DNMT3A-205ENST00000402667 MT1HP80294 61 aa7.44□□□□□ -1.22
DNMT3A-205ENST00000402667 M0R2T5 61 aa7.43□□□□□ -1.22
DNMT3A-205ENST00000402667 SPRR2GQ9BYE4 73 aa7.36□□□□□ -1.23
DNMT3A-205ENST00000402667 KRTAP19-1Q8IUB9 90 aa7.33□□□□□ -1.24
DNMT3A-205ENST00000402667 NDUFAF8A1L188 74 aa7.29□□□□□ -1.24
DNMT3A-205ENST00000402667 MT2AP02795 61 aa7.27□□□□□ -1.25
DNMT3A-205ENST00000402667 MT1FP04733 61 aa7.26□□□□□ -1.25
DNMT3A-205ENST00000402667 PP632Q6XCG6 107 aa7.26□□□□□ -1.25
DNMT3A-205ENST00000402667 KRTAP9-8Q9BYQ0 159 aa7.25□□□□□ -1.25
DNMT3A-205ENST00000402667 KRTAP10-10P60014 251 aa7.24□□□□□ -1.25
DNMT3A-205ENST00000402667 PLAC4Q8WY50 150 aa7.23□□□□□ -1.25
DNMT3A-205ENST00000402667 TNP1P09430 55 aa7.22□□□□□ -1.25
DNMT3A-205ENST00000402667 A0A0A0MQY5 61 aa7.19□□□□□ -1.26
DNMT3A-205ENST00000402667 KRTAP23-1A1A580 65 aa7.1□□□□□ -1.27
DNMT3A-205ENST00000402667 KRTAP19-8Q3LI54 63 aa7.07□□□□□ -1.28
DNMT3A-205ENST00000402667 MT1BP07438 61 aa6.98□□□□□ -1.29
DNMT3A-205ENST00000402667 KRTAP9-3Q9BYQ3 159 aa6.95□□□□□ -1.3
DNMT3A-205ENST00000402667 KRTAP10-5P60370 271 aa6.88□□□□□ -1.31
DNMT3A-205ENST00000402667 MT1XP80297 61 aa6.88□□□□□ -1.31
DNMT3A-205ENST00000402667 LCE2AQ5TA79 106 aaPredicted RBP6.87□□□□□ -1.31
DNMT3A-205ENST00000402667 LCE3AQ5TA76 89 aa6.87□□□□□ -1.31
DNMT3A-205ENST00000402667 LUZP6Q538Z0 58 aa6.82□□□□□ -1.32
DNMT3A-205ENST00000402667 KRTAP8-1Q8IUC2 63 aa6.71□□□□□ -1.34
DNMT3A-205ENST00000402667 LCE2BO14633 110 aa6.7□□□□□ -1.34
DNMT3A-205ENST00000402667 SPRR5A0A1B0GTR4 108 aa6.7□□□□□ -1.34
DNMT3A-205ENST00000402667 KRTAP10-7P60409 375 aaPredicted RBP6.67□□□□□ -1.34
DNMT3A-205ENST00000402667 KRTAP10-12P60413 245 aa6.67□□□□□ -1.34
DNMT3A-205ENST00000402667 PRO2289Q9P1D8 64 aa6.66□□□□□ -1.34
DNMT3A-205ENST00000402667 KRTAP12-3P60328 96 aa6.55□□□□□ -1.36
DNMT3A-205ENST00000402667 USH2AO75445 5202 aa6.54□□□□□ -1.36
DNMT3A-205ENST00000402667 FSIP2Q5CZC0 6907 aa6.49□□□□□ -1.37
DNMT3A-205ENST00000402667 KRTAP9-2Q9BYQ4 174 aa6.45□□□□□ -1.38
DNMT3A-205ENST00000402667 LCE2DQ5TA82 110 aaPredicted RBP6.37□□□□□ -1.39
DNMT3A-205ENST00000402667 KRTAP19-5Q3LI72 72 aa6.35□□□□□ -1.39
DNMT3A-205ENST00000402667 KMT2DO14686 5537 aa6.33□□□□□ -1.4
DNMT3A-205ENST00000402667 KRTAP4-8A0A0G2JLE6 195 aa6.3□□□□□ -1.4
DNMT3A-205ENST00000402667 KRTAP4-8Q9BYQ9 185 aa6.3□□□□□ -1.4
DNMT3A-205ENST00000402667 SSPOA2VEC9 5147 aa6.2□□□□□ -1.42
DNMT3A-205ENST00000402667 LCE3CQ5T5A8 94 aa6.16□□□□□ -1.42
DNMT3A-205ENST00000402667 CRCT1Q9UGL9 99 aa6.14□□□□□ -1.43
DNMT3A-205ENST00000402667 KRTAP19-7Q3SYF9 63 aa6.14□□□□□ -1.43
DNMT3A-205ENST00000402667 KRTAP9-6A0A140TA67 174 aa6.1□□□□□ -1.43
DNMT3A-205ENST00000402667 KRTAP19-6Q3LI70 58 aa6.09□□□□□ -1.43
DNMT3A-205ENST00000402667 MT1EP04732 61 aa5.97□□□□□ -1.45
DNMT3A-205ENST00000402667 FCGBPQ9Y6R7 5405 aaPredicted RBP5.95□□□□□ -1.46
DNMT3A-205ENST00000402667 MT1LQ93083 61 aa5.94□□□□□ -1.46
DNMT3A-205ENST00000402667 KRTAP4-7Q9BYR0 210 aa5.93□□□□□ -1.46
DNMT3A-205ENST00000402667 KRTAP9-6A8MVA2 160 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms