RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 P0C880 135 aa4.73□□□□□ -1.65
HPS4-203ENST00000402105 KRTAP10-8P60410 259 aa4.73□□□□□ -1.65
HPS4-203ENST00000402105 LRP1Q07954 4544 aaKnown RBP4.71□□□□□ -1.66
HPS4-203ENST00000402105 SACSQ9NZJ4 4579 aa4.7□□□□□ -1.66
HPS4-203ENST00000402105 KRTAP10-6P60371 365 aaPredicted RBP4.7□□□□□ -1.66
HPS4-203ENST00000402105 TPRXLQ17RH7 258 aa4.69□□□□□ -1.66
HPS4-203ENST00000402105 KRTAP3-3Q9BYR6 98 aa4.68□□□□□ -1.66
HPS4-203ENST00000402105 KRTAP10-4P60372 401 aaPredicted RBP4.66□□□□□ -1.66
HPS4-203ENST00000402105 KMT2CQ8NEZ4 4911 aaKnown RBP4.65□□□□□ -1.66
HPS4-203ENST00000402105 Q5VSD8 79 aa4.65□□□□□ -1.66
HPS4-203ENST00000402105 XP32Q5T750 250 aa4.65□□□□□ -1.67
HPS4-203ENST00000402105 KRTAP12-2P59991 146 aa4.64□□□□□ -1.67
HPS4-203ENST00000402105 KRTAP3-2Q9BYR7 98 aa4.63□□□□□ -1.67
HPS4-203ENST00000402105 APOBP04114 4563 aaKnown RBP4.63□□□□□ -1.67
HPS4-203ENST00000402105 A0A1B0GVY2 172 aa4.62□□□□□ -1.67
HPS4-203ENST00000402105 NDUFAF8A1L188 74 aa4.62□□□□□ -1.67
HPS4-203ENST00000402105 FAT3Q8TDW7 4589 aa4.6□□□□□ -1.67
HPS4-203ENST00000402105 HSPG2P98160 4391 aa4.6□□□□□ -1.67
HPS4-203ENST00000402105 J3QL48 77 aa4.57□□□□□ -1.68
HPS4-203ENST00000402105 M0QZ58 72 aa4.54□□□□□ -1.68
HPS4-203ENST00000402105 PKHD1L1Q86WI1 4243 aa4.53□□□□□ -1.68
HPS4-203ENST00000402105 LPAP08519 4548 aa4.53□□□□□ -1.68
HPS4-203ENST00000402105 KRTAP12-1P59990 96 aa4.53□□□□□ -1.68
HPS4-203ENST00000402105 KIAA1109Q2LD37 5005 aa4.51□□□□□ -1.69
HPS4-203ENST00000402105 RYR2Q92736 4967 aa4.51□□□□□ -1.69
HPS4-203ENST00000402105 R4GN34 69 aa4.5□□□□□ -1.69
HPS4-203ENST00000402105 RYR3Q15413 4870 aa4.5□□□□□ -1.69
HPS4-203ENST00000402105 LRP2P98164 4655 aa4.49□□□□□ -1.69
HPS4-203ENST00000402105 LCE2DQ5TA82 110 aaPredicted RBP4.48□□□□□ -1.69
HPS4-203ENST00000402105 KRTAP17-1Q9BYP8 105 aa4.45□□□□□ -1.7
HPS4-203ENST00000402105 KRTAP4-5Q9BYR2 181 aa4.43□□□□□ -1.7
HPS4-203ENST00000402105 KRTAP15-1Q3LI76 137 aa4.43□□□□□ -1.7
HPS4-203ENST00000402105 EPPK1P58107 5090 aaKnown RBP4.42□□□□□ -1.7
HPS4-203ENST00000402105 RYR1P21817 5038 aa4.41□□□□□ -1.7
HPS4-203ENST00000402105 TNXBP22105 4242 aa4.41□□□□□ -1.7
HPS4-203ENST00000402105 MT1HL1P0DM35 61 aa4.39□□□□□ -1.71
HPS4-203ENST00000402105 CAMK2N1Q7Z7J9 78 aa4.37□□□□□ -1.71
HPS4-203ENST00000402105 LORP23490 312 aaPredicted RBP4.36□□□□□ -1.71
HPS4-203ENST00000402105 A0A0A0MQY5 61 aa4.35□□□□□ -1.71
HPS4-203ENST00000402105 PLAC4Q8WY50 150 aa4.32□□□□□ -1.72
HPS4-203ENST00000402105 ABCA13Q86UQ4 5058 aa4.31□□□□□ -1.72
HPS4-203ENST00000402105 BIRC6Q9NR09 4857 aa4.3□□□□□ -1.72
HPS4-203ENST00000402105 HERC2O95714 4834 aa4.26□□□□□ -1.73
HPS4-203ENST00000402105 SEC61BP60468 96 aaKnown RBP4.26□□□□□ -1.73
HPS4-203ENST00000402105 LUZP6Q538Z0 58 aa4.24□□□□□ -1.73
HPS4-203ENST00000402105 MUC2Q02817 5179 aa4.23□□□□□ -1.73
HPS4-203ENST00000402105 KRTAP4-1Q9BYQ7 146 aa4.21□□□□□ -1.74
HPS4-203ENST00000402105 PCLOQ9Y6V0 5065 aa4.09□□□□□ -1.76
HPS4-203ENST00000402105 TNP1P09430 55 aa4.08□□□□□ -1.76
HPS4-203ENST00000402105 HERC1Q15751 4861 aa4.07□□□□□ -1.76
HPS4-203ENST00000402105 PP632Q6XCG6 107 aa4.06□□□□□ -1.76
HPS4-203ENST00000402105 M0R2T5 61 aa4.05□□□□□ -1.76
HPS4-203ENST00000402105 MUC17Q685J3 4493 aa4.03□□□□□ -1.76
HPS4-203ENST00000402105 FAT4Q6V0I7 4981 aa4.01□□□□□ -1.77
HPS4-203ENST00000402105 KRTAP19-2Q3LHN2 52 aa3.94□□□□□ -1.78
HPS4-203ENST00000402105 RNF213Q63HN8 5207 aa3.9□□□□□ -1.79
HPS4-203ENST00000402105 UBR4Q5T4S7 5183 aa3.89□□□□□ -1.79
HPS4-203ENST00000402105 KRTAP10-10P60014 251 aa3.86□□□□□ -1.79
HPS4-203ENST00000402105 LCE3AQ5TA76 89 aa3.84□□□□□ -1.79
HPS4-203ENST00000402105 LCE2BO14633 110 aa3.83□□□□□ -1.8
HPS4-203ENST00000402105 FLGP20930 4061 aaPredicted RBP3.82□□□□□ -1.8
HPS4-203ENST00000402105 HMCN2Q8NDA2 5059 aa3.8□□□□□ -1.8
HPS4-203ENST00000402105 KRTAP19-1Q8IUB9 90 aa3.77□□□□□ -1.81
HPS4-203ENST00000402105 LCE2CQ5TA81 110 aa3.72□□□□□ -1.81
HPS4-203ENST00000402105 SPRR2GQ9BYE4 73 aa3.72□□□□□ -1.81
HPS4-203ENST00000402105 SPRR5A0A1B0GTR4 108 aa3.71□□□□□ -1.82
HPS4-203ENST00000402105 KRTAP23-1A1A580 65 aa3.71□□□□□ -1.82
HPS4-203ENST00000402105 MT1FP04733 61 aa3.71□□□□□ -1.82
HPS4-203ENST00000402105 MT1HP80294 61 aa3.69□□□□□ -1.82
HPS4-203ENST00000402105 MT2AP02795 61 aa3.67□□□□□ -1.82
HPS4-203ENST00000402105 KRTAP12-3P60328 96 aa3.63□□□□□ -1.83
HPS4-203ENST00000402105 KRTAP10-12P60413 245 aa3.62□□□□□ -1.83
HPS4-203ENST00000402105 FSIP2Q5CZC0 6907 aa3.6□□□□□ -1.83
HPS4-203ENST00000402105 KRTAP9-8Q9BYQ0 159 aa3.58□□□□□ -1.84
HPS4-203ENST00000402105 KRTAP10-7P60409 375 aaPredicted RBP3.58□□□□□ -1.84
HPS4-203ENST00000402105 KRTAP10-5P60370 271 aa3.57□□□□□ -1.84
HPS4-203ENST00000402105 KRTAP8-1Q8IUC2 63 aa3.57□□□□□ -1.84
HPS4-203ENST00000402105 USH2AO75445 5202 aa3.56□□□□□ -1.84
HPS4-203ENST00000402105 MT1XP80297 61 aa3.56□□□□□ -1.84
HPS4-203ENST00000402105 KMT2DO14686 5537 aa3.55□□□□□ -1.84
HPS4-203ENST00000402105 MT1BP07438 61 aa3.55□□□□□ -1.84
HPS4-203ENST00000402105 PRO2289Q9P1D8 64 aa3.54□□□□□ -1.84
HPS4-203ENST00000402105 KRTAP19-8Q3LI54 63 aa3.49□□□□□ -1.85
HPS4-203ENST00000402105 INE1O15225 51 aa3.46□□□□□ -1.86
HPS4-203ENST00000402105 KRTAP19-5Q3LI72 72 aa3.45□□□□□ -1.86
HPS4-203ENST00000402105 LCE2AQ5TA79 106 aaPredicted RBP3.45□□□□□ -1.86
HPS4-203ENST00000402105 KRTAP4-8A0A0G2JLE6 195 aa3.42□□□□□ -1.86
HPS4-203ENST00000402105 KRTAP4-8Q9BYQ9 185 aa3.42□□□□□ -1.86
HPS4-203ENST00000402105 KRTAP9-3Q9BYQ3 159 aa3.4□□□□□ -1.86
HPS4-203ENST00000402105 LCE3CQ5T5A8 94 aa3.37□□□□□ -1.87
HPS4-203ENST00000402105 KRTAP4-7Q9BYR0 210 aa3.36□□□□□ -1.87
HPS4-203ENST00000402105 KRTAP9-6A8MVA2 160 aa3.28□□□□□ -1.88
HPS4-203ENST00000402105 KRTAP9-2Q9BYQ4 174 aa3.28□□□□□ -1.88
HPS4-203ENST00000402105 CRCT1Q9UGL9 99 aa3.24□□□□□ -1.89
HPS4-203ENST00000402105 DSTQ03001 7570 aaKnown RBP3.21□□□□□ -1.9
HPS4-203ENST00000402105 KRTAP19-7Q3SYF9 63 aa3.16□□□□□ -1.9
HPS4-203ENST00000402105 KRTAP9-6A0A140TA67 174 aa3.15□□□□□ -1.9
HPS4-203ENST00000402105 FCGBPQ9Y6R7 5405 aaPredicted RBP3.12□□□□□ -1.91
HPS4-203ENST00000402105 LOC100996750A0A140TA64 210 aa3.12□□□□□ -1.91
HPS4-203ENST00000402105 KRTAP4-3Q9BYR4 195 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms