RNA–Protein interactions for RNA: ENST00000400181.8

KDM1A-202, Transcript of lysine demethylase 1A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KDM1A, Length 3,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-202ENST00000400181 PKHD1L1Q86WI1 4243 aa9.29□□□□□ -0.92
KDM1A-202ENST00000400181 KRTAP10-4P60372 401 aaPredicted RBP9.28□□□□□ -0.92
KDM1A-202ENST00000400181 SPINT4Q6UDR6 99 aa9.28□□□□□ -0.92
KDM1A-202ENST00000400181 MYCBP2O75592 4640 aa9.28□□□□□ -0.92
KDM1A-202ENST00000400181 TPRXLQ17RH7 258 aa9.26□□□□□ -0.93
KDM1A-202ENST00000400181 KRTAP10-8P60410 259 aa9.25□□□□□ -0.93
KDM1A-202ENST00000400181 LRP1Q07954 4544 aaKnown RBP9.24□□□□□ -0.93
KDM1A-202ENST00000400181 APOBP04114 4563 aaKnown RBP9.24□□□□□ -0.93
KDM1A-202ENST00000400181 KRTAP3-2Q9BYR7 98 aa9.23□□□□□ -0.93
KDM1A-202ENST00000400181 S4R3F8 94 aa9.21□□□□□ -0.93
KDM1A-202ENST00000400181 HSPG2P98160 4391 aa9.21□□□□□ -0.94
KDM1A-202ENST00000400181 FAT3Q8TDW7 4589 aa9.12□□□□□ -0.95
KDM1A-202ENST00000400181 A0A1B0GVY2 172 aa9.11□□□□□ -0.95
KDM1A-202ENST00000400181 KRTAP12-2P59991 146 aa9.11□□□□□ -0.95
KDM1A-202ENST00000400181 XP32Q5T750 250 aa9.07□□□□□ -0.96
KDM1A-202ENST00000400181 NDUFAF8A1L188 74 aa8.99□□□□□ -0.97
KDM1A-202ENST00000400181 TNXBP22105 4242 aa8.97□□□□□ -0.97
KDM1A-202ENST00000400181 KRTAP12-1P59990 96 aa8.96□□□□□ -0.98
KDM1A-202ENST00000400181 LPAP08519 4548 aa8.93□□□□□ -0.98
KDM1A-202ENST00000400181 Q5VSD8 79 aa8.92□□□□□ -0.98
KDM1A-202ENST00000400181 KRTAP15-1Q3LI76 137 aa8.88□□□□□ -0.99
KDM1A-202ENST00000400181 KMT2CQ8NEZ4 4911 aaKnown RBP8.87□□□□□ -0.99
KDM1A-202ENST00000400181 RYR2Q92736 4967 aa8.82□□□□□ -1
KDM1A-202ENST00000400181 LRP2P98164 4655 aa8.81□□□□□ -1
KDM1A-202ENST00000400181 M0QZ58 72 aa8.73□□□□□ -1.01
KDM1A-202ENST00000400181 KRTAP17-1Q9BYP8 105 aa8.72□□□□□ -1.01
KDM1A-202ENST00000400181 R4GN34 69 aa8.65□□□□□ -1.02
KDM1A-202ENST00000400181 MT1HL1P0DM35 61 aa8.64□□□□□ -1.03
KDM1A-202ENST00000400181 KIAA1109Q2LD37 5005 aa8.63□□□□□ -1.03
KDM1A-202ENST00000400181 RYR1P21817 5038 aa8.57□□□□□ -1.04
KDM1A-202ENST00000400181 RYR3Q15413 4870 aa8.55□□□□□ -1.04
KDM1A-202ENST00000400181 KRTAP21-3Q3LHN1 58 aa8.52□□□□□ -1.05
KDM1A-202ENST00000400181 LORP23490 312 aaPredicted RBP8.52□□□□□ -1.05
KDM1A-202ENST00000400181 PLAC4Q8WY50 150 aa8.43□□□□□ -1.06
KDM1A-202ENST00000400181 ABCA13Q86UQ4 5058 aa8.42□□□□□ -1.06
KDM1A-202ENST00000400181 CAMK2N1Q7Z7J9 78 aa8.31□□□□□ -1.08
KDM1A-202ENST00000400181 KRTAP4-1Q9BYQ7 146 aa8.24□□□□□ -1.09
KDM1A-202ENST00000400181 KRTAP4-5Q9BYR2 181 aa8.23□□□□□ -1.09
KDM1A-202ENST00000400181 SEC61BP60468 96 aaKnown RBP8.21□□□□□ -1.09
KDM1A-202ENST00000400181 EPPK1P58107 5090 aaKnown RBP8.18□□□□□ -1.1
KDM1A-202ENST00000400181 MUC17Q685J3 4493 aa8.18□□□□□ -1.1
KDM1A-202ENST00000400181 LUZP6Q538Z0 58 aa8.16□□□□□ -1.1
KDM1A-202ENST00000400181 MUC2Q02817 5179 aa8.1□□□□□ -1.11
KDM1A-202ENST00000400181 PP632Q6XCG6 107 aa8.06□□□□□ -1.12
KDM1A-202ENST00000400181 J3QL48 77 aa8□□□□□ -1.13
KDM1A-202ENST00000400181 KRTAP19-2Q3LHN2 52 aa7.95□□□□□ -1.14
KDM1A-202ENST00000400181 TNP1P09430 55 aa7.91□□□□□ -1.14
KDM1A-202ENST00000400181 A0A0A0MQY5 61 aa7.9□□□□□ -1.14
KDM1A-202ENST00000400181 HERC2O95714 4834 aa7.8□□□□□ -1.16
KDM1A-202ENST00000400181 FLGP20930 4061 aaPredicted RBP7.75□□□□□ -1.17
KDM1A-202ENST00000400181 PCLOQ9Y6V0 5065 aa7.74□□□□□ -1.17
KDM1A-202ENST00000400181 FAT4Q6V0I7 4981 aa7.69□□□□□ -1.18
KDM1A-202ENST00000400181 SPRR5A0A1B0GTR4 108 aa7.59□□□□□ -1.19
KDM1A-202ENST00000400181 KRTAP23-1A1A580 65 aa7.55□□□□□ -1.2
KDM1A-202ENST00000400181 M0R2T5 61 aa7.53□□□□□ -1.2
KDM1A-202ENST00000400181 BIRC6Q9NR09 4857 aa7.52□□□□□ -1.21
KDM1A-202ENST00000400181 HERC1Q15751 4861 aa7.52□□□□□ -1.21
KDM1A-202ENST00000400181 LCE3AQ5TA76 89 aa7.51□□□□□ -1.21
KDM1A-202ENST00000400181 KRTAP19-1Q8IUB9 90 aa7.46□□□□□ -1.22
KDM1A-202ENST00000400181 SPRR2GQ9BYE4 73 aa7.41□□□□□ -1.22
KDM1A-202ENST00000400181 LCE2CQ5TA81 110 aa7.4□□□□□ -1.23
KDM1A-202ENST00000400181 KRTAP10-10P60014 251 aa7.34□□□□□ -1.23
KDM1A-202ENST00000400181 RNF213Q63HN8 5207 aa7.34□□□□□ -1.23
KDM1A-202ENST00000400181 HMCN2Q8NDA2 5059 aa7.29□□□□□ -1.24
KDM1A-202ENST00000400181 MT1FP04733 61 aa7.25□□□□□ -1.25
KDM1A-202ENST00000400181 MT1HP80294 61 aa7.21□□□□□ -1.26
KDM1A-202ENST00000400181 MT2AP02795 61 aa7.2□□□□□ -1.26
KDM1A-202ENST00000400181 UBR4Q5T4S7 5183 aa7.18□□□□□ -1.26
KDM1A-202ENST00000400181 KRTAP8-1Q8IUC2 63 aa7.14□□□□□ -1.27
KDM1A-202ENST00000400181 KRTAP12-3P60328 96 aa7.09□□□□□ -1.27
KDM1A-202ENST00000400181 PRO2289Q9P1D8 64 aa7.08□□□□□ -1.28
KDM1A-202ENST00000400181 KRTAP10-5P60370 271 aa7.07□□□□□ -1.28
KDM1A-202ENST00000400181 KRTAP9-8Q9BYQ0 159 aa7.07□□□□□ -1.28
KDM1A-202ENST00000400181 KRTAP10-12P60413 245 aa7.05□□□□□ -1.28
KDM1A-202ENST00000400181 MT1XP80297 61 aa7.05□□□□□ -1.28
KDM1A-202ENST00000400181 MT1BP07438 61 aa7.02□□□□□ -1.29
KDM1A-202ENST00000400181 KRTAP19-8Q3LI54 63 aa6.99□□□□□ -1.29
KDM1A-202ENST00000400181 KRTAP10-7P60409 375 aaPredicted RBP6.99□□□□□ -1.29
KDM1A-202ENST00000400181 INE1O15225 51 aa6.94□□□□□ -1.3
KDM1A-202ENST00000400181 KMT2DO14686 5537 aa6.78□□□□□ -1.32
KDM1A-202ENST00000400181 KRTAP9-3Q9BYQ3 159 aa6.73□□□□□ -1.33
KDM1A-202ENST00000400181 KRTAP19-5Q3LI72 72 aa6.73□□□□□ -1.33
KDM1A-202ENST00000400181 USH2AO75445 5202 aa6.73□□□□□ -1.33
KDM1A-202ENST00000400181 LCE3CQ5T5A8 94 aa6.65□□□□□ -1.35
KDM1A-202ENST00000400181 KRTAP4-8A0A0G2JLE6 195 aa6.58□□□□□ -1.36
KDM1A-202ENST00000400181 KRTAP4-8Q9BYQ9 185 aa6.58□□□□□ -1.36
KDM1A-202ENST00000400181 KRTAP9-6A8MVA2 160 aa6.52□□□□□ -1.37
KDM1A-202ENST00000400181 LCE2BO14633 110 aa6.51□□□□□ -1.37
KDM1A-202ENST00000400181 KRTAP4-7Q9BYR0 210 aa6.48□□□□□ -1.37
KDM1A-202ENST00000400181 KRTAP19-7Q3SYF9 63 aa6.27□□□□□ -1.41
KDM1A-202ENST00000400181 FSIP2Q5CZC0 6907 aa6.24□□□□□ -1.41
KDM1A-202ENST00000400181 KRTAP2-3P0C7H8 128 aa6.23□□□□□ -1.41
KDM1A-202ENST00000400181 KRTAP2-4Q9BYR9 128 aa6.23□□□□□ -1.41
KDM1A-202ENST00000400181 KRTAP2-1Q9BYU5 128 aa6.23□□□□□ -1.41
KDM1A-202ENST00000400181 MT1LQ93083 61 aa6.11□□□□□ -1.43
KDM1A-202ENST00000400181 MT1EP04732 61 aa6.05□□□□□ -1.44
KDM1A-202ENST00000400181 LOC100996750A0A140TA64 210 aa6.02□□□□□ -1.45
KDM1A-202ENST00000400181 LCE2AQ5TA79 106 aaPredicted RBP6□□□□□ -1.45
KDM1A-202ENST00000400181 KRTAP4-3Q9BYR4 195 aa5.98□□□□□ -1.45
KDM1A-202ENST00000400181 CRCT1Q9UGL9 99 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms