RNA–Protein interactions for RNA: ENST00000399410.7

ABCC1-202, Transcript of ATP binding cassette subfamily C member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC1-202ENST00000399410 KRTAP12-3P60328 96 aa6.55□□□□□ -1.36
ABCC1-202ENST00000399410 LCE3AQ5TA76 89 aa6.5□□□□□ -1.37
ABCC1-202ENST00000399410 CSMD3Q7Z407 3707 aa6.49□□□□□ -1.37
ABCC1-202ENST00000399410 INE1O15225 51 aa6.48□□□□□ -1.37
ABCC1-202ENST00000399410 DNAH1Q9P2D7 4330 aa6.47□□□□□ -1.37
ABCC1-202ENST00000399410 DNAH10Q8IVF4 4471 aa6.45□□□□□ -1.38
ABCC1-202ENST00000399410 PLECQ15149 4684 aaKnown RBP6.45□□□□□ -1.38
ABCC1-202ENST00000399410 DNAH11Q96DT5 4516 aa6.44□□□□□ -1.38
ABCC1-202ENST00000399410 DNAH17Q9UFH2 4485 aa6.37□□□□□ -1.39
ABCC1-202ENST00000399410 AKAP9Q99996 3911 aa6.37□□□□□ -1.39
ABCC1-202ENST00000399410 KRTAP4-1Q9BYQ7 146 aa6.37□□□□□ -1.39
ABCC1-202ENST00000399410 DNHD1Q96M86 4753 aa6.36□□□□□ -1.39
ABCC1-202ENST00000399410 VPS13DQ5THJ4 4388 aa6.35□□□□□ -1.39
ABCC1-202ENST00000399410 ZNF469Q96JG9 3925 aaPredicted RBP6.35□□□□□ -1.39
ABCC1-202ENST00000399410 DNAH2Q9P225 4427 aa6.34□□□□□ -1.39
ABCC1-202ENST00000399410 DYNC1H1Q14204 4646 aaKnown RBP6.32□□□□□ -1.4
ABCC1-202ENST00000399410 MT1HP80294 61 aa6.25□□□□□ -1.41
ABCC1-202ENST00000399410 LRP1BQ9NZR2 4599 aa6.21□□□□□ -1.42
ABCC1-202ENST00000399410 KRTAP8-1Q8IUC2 63 aa6.19□□□□□ -1.42
ABCC1-202ENST00000399410 MT2AP02795 61 aa6.17□□□□□ -1.42
ABCC1-202ENST00000399410 SACSQ9NZJ4 4579 aa6.16□□□□□ -1.42
ABCC1-202ENST00000399410 RYR1P21817 5038 aa6.16□□□□□ -1.42
ABCC1-202ENST00000399410 FAT1Q14517 4588 aa6.16□□□□□ -1.42
ABCC1-202ENST00000399410 STARD9Q9P2P6 4700 aa6.15□□□□□ -1.42
ABCC1-202ENST00000399410 SPRR2GQ9BYE4 73 aa6.15□□□□□ -1.43
ABCC1-202ENST00000399410 DYNC2H1Q8NCM8 4307 aaKnown RBP6.09□□□□□ -1.43
ABCC1-202ENST00000399410 FAT2Q9NYQ8 4349 aa6.06□□□□□ -1.44
ABCC1-202ENST00000399410 DNAH3Q8TD57 4116 aa6.05□□□□□ -1.44
ABCC1-202ENST00000399410 MT1FP04733 61 aa6.04□□□□□ -1.44
ABCC1-202ENST00000399410 DNAH8Q96JB1 4490 aa6.03□□□□□ -1.44
ABCC1-202ENST00000399410 KRTAP10-5P60370 271 aa5.98□□□□□ -1.45
ABCC1-202ENST00000399410 APOBP04114 4563 aaKnown RBP5.98□□□□□ -1.45
ABCC1-202ENST00000399410 RYR3Q15413 4870 aa5.91□□□□□ -1.46
ABCC1-202ENST00000399410 PRKDCP78527 4128 aaKnown RBP5.9□□□□□ -1.47
ABCC1-202ENST00000399410 ANK2Q01484 3957 aa5.87□□□□□ -1.47
ABCC1-202ENST00000399410 KIAA1109Q2LD37 5005 aa5.85□□□□□ -1.47
ABCC1-202ENST00000399410 KRTAP19-5Q3LI72 72 aa5.85□□□□□ -1.47
ABCC1-202ENST00000399410 KRTAP17-1Q9BYP8 105 aa5.82□□□□□ -1.48
ABCC1-202ENST00000399410 RYR2Q92736 4967 aa5.79□□□□□ -1.48
ABCC1-202ENST00000399410 KMT2AQ03164 3969 aa5.77□□□□□ -1.49
ABCC1-202ENST00000399410 LCE3CQ5T5A8 94 aa5.76□□□□□ -1.49
ABCC1-202ENST00000399410 VPS13BQ7Z7G8 4022 aa5.76□□□□□ -1.49
ABCC1-202ENST00000399410 SPRR2FQ96RM1 72 aa5.75□□□□□ -1.49
ABCC1-202ENST00000399410 KRTAP19-8Q3LI54 63 aa5.74□□□□□ -1.49
ABCC1-202ENST00000399410 KRTAP19-1Q8IUB9 90 aa5.73□□□□□ -1.49
ABCC1-202ENST00000399410 DNAH6Q9C0G6 4158 aa5.73□□□□□ -1.49
ABCC1-202ENST00000399410 FAT3Q8TDW7 4589 aa5.71□□□□□ -1.5
ABCC1-202ENST00000399410 MYCBP2O75592 4640 aa5.7□□□□□ -1.5
ABCC1-202ENST00000399410 KRTAP19-4Q3LI73 84 aa5.69□□□□□ -1.5
ABCC1-202ENST00000399410 KRTAP10-7P60409 375 aaPredicted RBP5.68□□□□□ -1.5
ABCC1-202ENST00000399410 LYSTQ99698 3801 aa5.65□□□□□ -1.5
ABCC1-202ENST00000399410 HERC1Q15751 4861 aa5.62□□□□□ -1.51
ABCC1-202ENST00000399410 DNAH7Q8WXX0 4024 aa5.62□□□□□ -1.51
ABCC1-202ENST00000399410 LRP1Q07954 4544 aaKnown RBP5.59□□□□□ -1.51
ABCC1-202ENST00000399410 MT1XP80297 61 aa5.57□□□□□ -1.52
ABCC1-202ENST00000399410 FRAS1Q86XX4 4008 aa5.57□□□□□ -1.52
ABCC1-202ENST00000399410 CMYA5Q8N3K9 4069 aa5.54□□□□□ -1.52
ABCC1-202ENST00000399410 MT1BP07438 61 aa5.54□□□□□ -1.52
ABCC1-202ENST00000399410 KRTAP9-8Q9BYQ0 159 aa5.52□□□□□ -1.53
ABCC1-202ENST00000399410 HERC2O95714 4834 aa5.51□□□□□ -1.53
ABCC1-202ENST00000399410 BIRC6Q9NR09 4857 aa5.5□□□□□ -1.53
ABCC1-202ENST00000399410 HECTD4Q9Y4D8 3996 aa5.49□□□□□ -1.53
ABCC1-202ENST00000399410 HSPG2P98160 4391 aa5.48□□□□□ -1.53
ABCC1-202ENST00000399410 LCE2CQ5TA81 110 aa5.46□□□□□ -1.53
ABCC1-202ENST00000399410 HYDINQ4G0P3 5121 aa5.4□□□□□ -1.54
ABCC1-202ENST00000399410 KRTAP9-3Q9BYQ3 159 aa5.4□□□□□ -1.54
ABCC1-202ENST00000399410 PCLOQ9Y6V0 5065 aa5.39□□□□□ -1.55
ABCC1-202ENST00000399410 PKD1P98161 4303 aa5.39□□□□□ -1.55
ABCC1-202ENST00000399410 SPRR2EP22531 72 aa5.38□□□□□ -1.55
ABCC1-202ENST00000399410 SPRR2BP35325 72 aa5.38□□□□□ -1.55
ABCC1-202ENST00000399410 SPRR2AP35326 72 aa5.38□□□□□ -1.55
ABCC1-202ENST00000399410 LRP2P98164 4655 aa5.35□□□□□ -1.55
ABCC1-202ENST00000399410 KRTAP4-8A0A0G2JLE6 195 aa5.32□□□□□ -1.56
ABCC1-202ENST00000399410 KRTAP4-8Q9BYQ9 185 aa5.32□□□□□ -1.56
ABCC1-202ENST00000399410 SPRR5A0A1B0GTR4 108 aa5.3□□□□□ -1.56
ABCC1-202ENST00000399410 MT1GP13640 62 aa5.29□□□□□ -1.56
ABCC1-202ENST00000399410 LCE3BQ5TA77 95 aa5.26□□□□□ -1.57
ABCC1-202ENST00000399410 KRTAP19-2Q3LHN2 52 aa5.23□□□□□ -1.57
ABCC1-202ENST00000399410 PKHD1L1Q86WI1 4243 aa5.22□□□□□ -1.57
ABCC1-202ENST00000399410 SPRR2DP22532 72 aa5.2□□□□□ -1.58
ABCC1-202ENST00000399410 LCE2BO14633 110 aa5.19□□□□□ -1.58
ABCC1-202ENST00000399410 PKHD1P08F94 4074 aa5.15□□□□□ -1.58
ABCC1-202ENST00000399410 LPAP08519 4548 aa5.14□□□□□ -1.59
ABCC1-202ENST00000399410 KMT2CQ8NEZ4 4911 aaKnown RBP5.14□□□□□ -1.59
ABCC1-202ENST00000399410 KRTAP12-4P60329 112 aa5.13□□□□□ -1.59
ABCC1-202ENST00000399410 MUC17Q685J3 4493 aa5.08□□□□□ -1.6
ABCC1-202ENST00000399410 ABCA13Q86UQ4 5058 aa5.07□□□□□ -1.6
ABCC1-202ENST00000399410 KRTAP19-3Q7Z4W3 81 aa5.07□□□□□ -1.6
ABCC1-202ENST00000399410 MT1LQ93083 61 aa5.05□□□□□ -1.6
ABCC1-202ENST00000399410 EPPK1P58107 5090 aaKnown RBP5.04□□□□□ -1.6
ABCC1-202ENST00000399410 TNXBP22105 4242 aa5.03□□□□□ -1.6
ABCC1-202ENST00000399410 MT1EP04732 61 aa5.01□□□□□ -1.61
ABCC1-202ENST00000399410 KRTAP4-7Q9BYR0 210 aa5□□□□□ -1.61
ABCC1-202ENST00000399410 LCE3DQ9BYE3 92 aa4.99□□□□□ -1.61
ABCC1-202ENST00000399410 FLGP20930 4061 aaPredicted RBP4.97□□□□□ -1.61
ABCC1-202ENST00000399410 LCE3EQ5T5B0 92 aa4.92□□□□□ -1.62
ABCC1-202ENST00000399410 KRTAP19-6Q3LI70 58 aa4.89□□□□□ -1.63
ABCC1-202ENST00000399410 MT1MQ8N339 61 aa4.85□□□□□ -1.63
ABCC1-202ENST00000399410 RNF213Q63HN8 5207 aa4.83□□□□□ -1.64
ABCC1-202ENST00000399410 FAT4Q6V0I7 4981 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms