RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 HERC1Q15751 4861 aa13.28□□□□□ -0.28
SHARPIN-202ENST00000398712 A8MU10 97 aa13.26□□□□□ -0.29
SHARPIN-202ENST00000398712 J3QL48 77 aa13.26□□□□□ -0.29
SHARPIN-202ENST00000398712 SEC61GP60059 68 aa13.25□□□□□ -0.29
SHARPIN-202ENST00000398712 UQCR11O14957 56 aa13.14□□□□□ -0.31
SHARPIN-202ENST00000398712 SPATA8Q6RVD6 105 aa13.05□□□□□ -0.32
SHARPIN-202ENST00000398712 S4R3F8 94 aa13.04□□□□□ -0.32
SHARPIN-202ENST00000398712 MIR22HGQ0VDD5 57 aa13.03□□□□□ -0.32
SHARPIN-202ENST00000398712 SEC61BP60468 96 aaKnown RBP13.01□□□□□ -0.33
SHARPIN-202ENST00000398712 H1FX-AS1Q4G0G2 97 aa13.01□□□□□ -0.33
SHARPIN-202ENST00000398712 RBM12B-AS1Q9P1G2 102 aa13□□□□□ -0.33
SHARPIN-202ENST00000398712 LRP2P98164 4655 aa13□□□□□ -0.33
SHARPIN-202ENST00000398712 KRTAP3-3Q9BYR6 98 aa12.99□□□□□ -0.33
SHARPIN-202ENST00000398712 PMAIP1Q13794 54 aa12.98□□□□□ -0.33
SHARPIN-202ENST00000398712 LPAP08519 4548 aa12.95□□□□□ -0.34
SHARPIN-202ENST00000398712 HMCN2Q8NDA2 5059 aa12.89□□□□□ -0.35
SHARPIN-202ENST00000398712 A0A1B0GU33 70 aa12.88□□□□□ -0.35
SHARPIN-202ENST00000398712 A6NN06 94 aa12.81□□□□□ -0.36
SHARPIN-202ENST00000398712 H0YAA0 97 aa12.75□□□□□ -0.37
SHARPIN-202ENST00000398712 KRTAP10-6P60371 365 aaPredicted RBP12.69□□□□□ -0.38
SHARPIN-202ENST00000398712 CSAG1Q6PB30 78 aa12.69□□□□□ -0.38
SHARPIN-202ENST00000398712 KRTAP3-2Q9BYR7 98 aa12.66□□□□□ -0.38
SHARPIN-202ENST00000398712 KRTAP4-1Q9BYQ7 146 aa12.64□□□□□ -0.39
SHARPIN-202ENST00000398712 KTN1-AS1Q86SY8 53 aa12.59□□□□□ -0.39
SHARPIN-202ENST00000398712 MUC17Q685J3 4493 aa12.56□□□□□ -0.4
SHARPIN-202ENST00000398712 ADM2Q7Z4H4 148 aa12.53□□□□□ -0.4
SHARPIN-202ENST00000398712 P0C880 135 aa12.51□□□□□ -0.41
SHARPIN-202ENST00000398712 UBR4Q5T4S7 5183 aa12.44□□□□□ -0.42
SHARPIN-202ENST00000398712 KRTAP13-4Q3LI77 160 aa12.41□□□□□ -0.42
SHARPIN-202ENST00000398712 KRTAP19-2Q3LHN2 52 aa12.38□□□□□ -0.43
SHARPIN-202ENST00000398712 K7ERS5 55 aa12.38□□□□□ -0.43
SHARPIN-202ENST00000398712 A0A0D9SG42 100 aa12.27□□□□□ -0.45
SHARPIN-202ENST00000398712 M0QZ58 72 aa12.25□□□□□ -0.45
SHARPIN-202ENST00000398712 RNF213Q63HN8 5207 aa12.15□□□□□ -0.46
SHARPIN-202ENST00000398712 PRAC1Q96KF2 57 aa12.09□□□□□ -0.47
SHARPIN-202ENST00000398712 MUC2Q02817 5179 aa12.07□□□□□ -0.48
SHARPIN-202ENST00000398712 R4GN34 69 aa12.05□□□□□ -0.48
SHARPIN-202ENST00000398712 FLGP20930 4061 aaPredicted RBP11.99□□□□□ -0.49
SHARPIN-202ENST00000398712 KRTAP12-1P59990 96 aa11.98□□□□□ -0.49
SHARPIN-202ENST00000398712 KRTAP12-2P59991 146 aa11.98□□□□□ -0.49
SHARPIN-202ENST00000398712 SPINT4Q6UDR6 99 aa11.95□□□□□ -0.5
SHARPIN-202ENST00000398712 ROMO1P60602 79 aa11.92□□□□□ -0.5
SHARPIN-202ENST00000398712 LORP23490 312 aaPredicted RBP11.9□□□□□ -0.5
SHARPIN-202ENST00000398712 LCE2CQ5TA81 110 aa11.89□□□□□ -0.51
SHARPIN-202ENST00000398712 LINC01554Q52M75 96 aa11.87□□□□□ -0.51
SHARPIN-202ENST00000398712 CRIPTQ9P021 101 aa11.74□□□□□ -0.53
SHARPIN-202ENST00000398712 KRTAP25-1Q3LHN0 102 aa11.69□□□□□ -0.54
SHARPIN-202ENST00000398712 FAT4Q6V0I7 4981 aa11.68□□□□□ -0.54
SHARPIN-202ENST00000398712 MT1HP80294 61 aa11.64□□□□□ -0.55
SHARPIN-202ENST00000398712 M0R2T5 61 aa11.63□□□□□ -0.55
SHARPIN-202ENST00000398712 LCE2AQ5TA79 106 aaPredicted RBP11.39□□□□□ -0.59
SHARPIN-202ENST00000398712 CAMK2N1Q7Z7J9 78 aa11.36□□□□□ -0.59
SHARPIN-202ENST00000398712 SPRR2GQ9BYE4 73 aa11.34□□□□□ -0.59
SHARPIN-202ENST00000398712 C10orf95Q9H7T3 257 aa11.31□□□□□ -0.6
SHARPIN-202ENST00000398712 MT2AP02795 61 aa11.3□□□□□ -0.6
SHARPIN-202ENST00000398712 KRTAP9-8Q9BYQ0 159 aa11.27□□□□□ -0.61
SHARPIN-202ENST00000398712 KRTAP10-10P60014 251 aa11.26□□□□□ -0.61
SHARPIN-202ENST00000398712 MT1FP04733 61 aa11.25□□□□□ -0.61
SHARPIN-202ENST00000398712 KRTAP19-1Q8IUB9 90 aa11.24□□□□□ -0.61
SHARPIN-202ENST00000398712 PLAC4Q8WY50 150 aa11.13□□□□□ -0.63
SHARPIN-202ENST00000398712 KRTAP19-8Q3LI54 63 aa10.95□□□□□ -0.66
SHARPIN-202ENST00000398712 TNP1P09430 55 aa10.89□□□□□ -0.67
SHARPIN-202ENST00000398712 PP632Q6XCG6 107 aa10.86□□□□□ -0.67
SHARPIN-202ENST00000398712 KRTAP9-3Q9BYQ3 159 aa10.85□□□□□ -0.67
SHARPIN-202ENST00000398712 MT1BP07438 61 aa10.76□□□□□ -0.69
SHARPIN-202ENST00000398712 KRTAP23-1A1A580 65 aa10.7□□□□□ -0.7
SHARPIN-202ENST00000398712 KRTAP9-2Q9BYQ4 174 aa10.62□□□□□ -0.71
SHARPIN-202ENST00000398712 LCE2DQ5TA82 110 aaPredicted RBP10.59□□□□□ -0.71
SHARPIN-202ENST00000398712 MT1XP80297 61 aa10.54□□□□□ -0.72
SHARPIN-202ENST00000398712 KRTAP10-5P60370 271 aa10.53□□□□□ -0.72
SHARPIN-202ENST00000398712 KRTAP15-1Q3LI76 137 aa10.47□□□□□ -0.73
SHARPIN-202ENST00000398712 LCE2BO14633 110 aa10.45□□□□□ -0.74
SHARPIN-202ENST00000398712 PRO2289Q9P1D8 64 aa10.4□□□□□ -0.74
SHARPIN-202ENST00000398712 FSIP2Q5CZC0 6907 aa10.33□□□□□ -0.76
SHARPIN-202ENST00000398712 LCE3AQ5TA76 89 aa10.31□□□□□ -0.76
SHARPIN-202ENST00000398712 USH2AO75445 5202 aa10.22□□□□□ -0.77
SHARPIN-202ENST00000398712 KRTAP10-12P60413 245 aa10.19□□□□□ -0.78
SHARPIN-202ENST00000398712 KRTAP10-7P60409 375 aaPredicted RBP10.14□□□□□ -0.79
SHARPIN-202ENST00000398712 KRTAP8-1Q8IUC2 63 aa10.12□□□□□ -0.79
SHARPIN-202ENST00000398712 CRCT1Q9UGL9 99 aa10.11□□□□□ -0.79
SHARPIN-202ENST00000398712 KRTAP9-6A0A140TA67 174 aa10.08□□□□□ -0.8
SHARPIN-202ENST00000398712 SSPOA2VEC9 5147 aa10.04□□□□□ -0.8
SHARPIN-202ENST00000398712 NDUFAF8A1L188 74 aa9.91□□□□□ -0.82
SHARPIN-202ENST00000398712 KRTAP12-3P60328 96 aa9.89□□□□□ -0.83
SHARPIN-202ENST00000398712 SPRR5A0A1B0GTR4 108 aa9.8□□□□□ -0.84
SHARPIN-202ENST00000398712 LUZP6Q538Z0 58 aa9.78□□□□□ -0.84
SHARPIN-202ENST00000398712 KRTAP19-6Q3LI70 58 aa9.78□□□□□ -0.84
SHARPIN-202ENST00000398712 FCGBPQ9Y6R7 5405 aaPredicted RBP9.74□□□□□ -0.85
SHARPIN-202ENST00000398712 KRTAP19-5Q3LI72 72 aa9.65□□□□□ -0.86
SHARPIN-202ENST00000398712 KRTAP4-8A0A0G2JLE6 195 aa9.6□□□□□ -0.87
SHARPIN-202ENST00000398712 KRTAP4-8Q9BYQ9 185 aa9.6□□□□□ -0.87
SHARPIN-202ENST00000398712 H3BS24 57 aa9.54□□□□□ -0.88
SHARPIN-202ENST00000398712 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.4□□□□□ -0.9
SHARPIN-202ENST00000398712 KMT2DO14686 5537 aa9.4□□□□□ -0.9
SHARPIN-202ENST00000398712 KRTAP19-7Q3SYF9 63 aa9.38□□□□□ -0.91
SHARPIN-202ENST00000398712 MACF1Q9UPN3 7388 aaKnown RBP9.37□□□□□ -0.91
SHARPIN-202ENST00000398712 LCE3CQ5T5A8 94 aa9.28□□□□□ -0.92
SHARPIN-202ENST00000398712 MT1EP04732 61 aa9.19□□□□□ -0.94
SHARPIN-202ENST00000398712 KRTAP19-4Q3LI73 84 aa9.19□□□□□ -0.94
SHARPIN-202ENST00000398712 SYNE2Q8WXH0 6885 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms