RNA–Protein interactions for RNA: ENST00000398541.2

RPS4XP3-201, Transcript of ribosomal protein S4X pseudogene 3, humanhuman

BASIC

Gene RPS4XP3, Length 413 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP3-201ENST00000398541 STAB2Q8WWQ8 2551 aa0.32□□□□□ -2.36
RPS4XP3-201ENST00000398541 SPRR2AP35326 72 aa0.32□□□□□ -2.36
RPS4XP3-201ENST00000398541 KRTAP6-2Q3LI66 62 aa0.32□□□□□ -2.36
RPS4XP3-201ENST00000398541 GOLGB1Q14789 3259 aaKnown RBP0.32□□□□□ -2.36
RPS4XP3-201ENST00000398541 TACC2O95359 2948 aa0.32□□□□□ -2.36
RPS4XP3-201ENST00000398541 HIVEP1P15822 2718 aa0.32□□□□□ -2.36
RPS4XP3-201ENST00000398541 BRCA2P51587 3418 aa0.32□□□□□ -2.36
RPS4XP3-201ENST00000398541 CSMD1Q96PZ7 3565 aa0.31□□□□□ -2.36
RPS4XP3-201ENST00000398541 VCANP13611 3396 aa0.31□□□□□ -2.36
RPS4XP3-201ENST00000398541 EP400Q96L91 3159 aa0.31□□□□□ -2.36
RPS4XP3-201ENST00000398541 SZT2Q5T011 3432 aa0.31□□□□□ -2.36
RPS4XP3-201ENST00000398541 TEP1Q99973 2627 aaKnown RBP0.31□□□□□ -2.36
RPS4XP3-201ENST00000398541 ZANQ9Y493 2812 aa0.31□□□□□ -2.36
RPS4XP3-201ENST00000398541 CDH23Q9H251 3354 aa0.31□□□□□ -2.36
RPS4XP3-201ENST00000398541 NBEAL1Q6ZS30 2694 aa0.31□□□□□ -2.36
RPS4XP3-201ENST00000398541 RELNP78509 3460 aa0.3□□□□□ -2.36
RPS4XP3-201ENST00000398541 DYNC2H1Q8NCM8 4307 aaKnown RBP0.3□□□□□ -2.36
RPS4XP3-201ENST00000398541 TGP01266 2768 aa0.3□□□□□ -2.36
RPS4XP3-201ENST00000398541 DNAH2Q9P225 4427 aa0.3□□□□□ -2.36
RPS4XP3-201ENST00000398541 XIRP2A4UGR9 3374 aa0.3□□□□□ -2.36
RPS4XP3-201ENST00000398541 TRRAPQ9Y4A5 3859 aa0.3□□□□□ -2.36
RPS4XP3-201ENST00000398541 CEP350Q5VT06 3117 aa0.3□□□□□ -2.36
RPS4XP3-201ENST00000398541 CMYA5Q8N3K9 4069 aa0.3□□□□□ -2.36
RPS4XP3-201ENST00000398541 COL6A3P12111 3177 aa0.3□□□□□ -2.36
RPS4XP3-201ENST00000398541 USP9XQ93008 2570 aaPredicted RBP0.3□□□□□ -2.36
RPS4XP3-201ENST00000398541 PKHD1L1Q86WI1 4243 aa0.3□□□□□ -2.36
RPS4XP3-201ENST00000398541 LAMA3Q16787 3333 aa0.3□□□□□ -2.36
RPS4XP3-201ENST00000398541 FRYQ5TBA9 3013 aa0.3□□□□□ -2.36
RPS4XP3-201ENST00000398541 HTTP42858 3142 aa0.29□□□□□ -2.36
RPS4XP3-201ENST00000398541 MUC5ACP98088 5654 aa0.29□□□□□ -2.36
RPS4XP3-201ENST00000398541 MKI67P46013 3256 aaKnown RBP0.29□□□□□ -2.36
RPS4XP3-201ENST00000398541 UNC80Q8N2C7 3258 aa0.29□□□□□ -2.36
RPS4XP3-201ENST00000398541 MT1AP04731 61 aa0.29□□□□□ -2.36
RPS4XP3-201ENST00000398541 ARHGAP5-AS1Q96IT6 56 aa0.29□□□□□ -2.36
RPS4XP3-201ENST00000398541 DNAH7Q8WXX0 4024 aa0.29□□□□□ -2.36
RPS4XP3-201ENST00000398541 CSMD2Q7Z408 3487 aa0.29□□□□□ -2.36
RPS4XP3-201ENST00000398541 SVEP1Q4LDE5 3571 aa0.29□□□□□ -2.36
RPS4XP3-201ENST00000398541 TLN2Q9Y4G6 2542 aa0.28□□□□□ -2.36
RPS4XP3-201ENST00000398541 CENPFP49454 3210 aa0.28□□□□□ -2.36
RPS4XP3-201ENST00000398541 LINC01590Q5TEZ4 76 aa0.28□□□□□ -2.36
RPS4XP3-201ENST00000398541 MAP1AP78559 2803 aaPredicted RBP0.28□□□□□ -2.36
RPS4XP3-201ENST00000398541 EYSQ5T1H1 3165 aa0.28□□□□□ -2.37
RPS4XP3-201ENST00000398541 CHD7Q9P2D1 2997 aa0.27□□□□□ -2.37
RPS4XP3-201ENST00000398541 RANBP2P49792 3224 aaKnown RBP0.27□□□□□ -2.37
RPS4XP3-201ENST00000398541 MGAM2Q2M2H8 2515 aa0.27□□□□□ -2.37
RPS4XP3-201ENST00000398541 APOBP04114 4563 aaKnown RBP0.27□□□□□ -2.37
RPS4XP3-201ENST00000398541 PRUNE2Q8WUY3 3088 aa0.27□□□□□ -2.37
RPS4XP3-201ENST00000398541 VPS13DQ5THJ4 4388 aa0.27□□□□□ -2.37
RPS4XP3-201ENST00000398541 DCHS1Q96JQ0 3298 aa0.26□□□□□ -2.37
RPS4XP3-201ENST00000398541 DNAH6Q9C0G6 4158 aa0.26□□□□□ -2.37
RPS4XP3-201ENST00000398541 LRP2P98164 4655 aa0.26□□□□□ -2.37
RPS4XP3-201ENST00000398541 LAMA2P24043 3122 aaKnown RBP0.26□□□□□ -2.37
RPS4XP3-201ENST00000398541 DNAH1Q9P2D7 4330 aa0.25□□□□□ -2.37
RPS4XP3-201ENST00000398541 CELSR3Q9NYQ7 3312 aa0.25□□□□□ -2.37
RPS4XP3-201ENST00000398541 SPRR2EP22531 72 aa0.25□□□□□ -2.37
RPS4XP3-201ENST00000398541 DEFB104AQ8WTQ1 72 aa0.25□□□□□ -2.37
RPS4XP3-201ENST00000398541 SPRR2GQ9BYE4 73 aa0.25□□□□□ -2.37
RPS4XP3-201ENST00000398541 SPEGQ15772 3267 aa0.25□□□□□ -2.37
RPS4XP3-201ENST00000398541 LOC400499M0QZD8 3231 aa0.25□□□□□ -2.37
RPS4XP3-201ENST00000398541 WDFY4Q6ZS81 3184 aa0.24□□□□□ -2.37
RPS4XP3-201ENST00000398541 C5orf42Q9H799 3197 aa0.24□□□□□ -2.37
RPS4XP3-201ENST00000398541 USP9YO00507 2555 aaPredicted RBP0.24□□□□□ -2.37
RPS4XP3-201ENST00000398541 FAT3Q8TDW7 4589 aa0.24□□□□□ -2.37
RPS4XP3-201ENST00000398541 MXRA5Q9NR99 2828 aa0.24□□□□□ -2.37
RPS4XP3-201ENST00000398541 CFAP47Q6ZTR5 3102 aa0.24□□□□□ -2.37
RPS4XP3-201ENST00000398541 VPS13AQ96RL7 3174 aa0.23□□□□□ -2.37
RPS4XP3-201ENST00000398541 MDN1Q9NU22 5596 aa0.23□□□□□ -2.37
RPS4XP3-201ENST00000398541 DEFB1P60022 68 aa0.23□□□□□ -2.37
RPS4XP3-201ENST00000398541 FREM2Q5SZK8 3169 aa0.23□□□□□ -2.37
RPS4XP3-201ENST00000398541 CFAP54Q96N23 3096 aa0.23□□□□□ -2.37
RPS4XP3-201ENST00000398541 DNAH17Q9UFH2 4485 aa0.23□□□□□ -2.37
RPS4XP3-201ENST00000398541 FRYLO94915 3013 aa0.23□□□□□ -2.37
RPS4XP3-201ENST00000398541 DNHD1Q96M86 4753 aa0.22□□□□□ -2.37
RPS4XP3-201ENST00000398541 KRTAP8-1Q8IUC2 63 aa0.22□□□□□ -2.37
RPS4XP3-201ENST00000398541 TTTY10Q9BZA0 68 aa0.22□□□□□ -2.37
RPS4XP3-201ENST00000398541 DNAH12Q6ZR08 3092 aa0.22□□□□□ -2.37
RPS4XP3-201ENST00000398541 DNAH8Q96JB1 4490 aa0.22□□□□□ -2.37
RPS4XP3-201ENST00000398541 WDR87Q6ZQQ6 2873 aa0.22□□□□□ -2.37
RPS4XP3-201ENST00000398541 SPTAN1Q13813 2472 aaKnown RBP0.22□□□□□ -2.37
RPS4XP3-201ENST00000398541 DNAH10Q8IVF4 4471 aa0.21□□□□□ -2.38
RPS4XP3-201ENST00000398541 TRIOO75962 3097 aa0.21□□□□□ -2.38
RPS4XP3-201ENST00000398541 ATMQ13315 3056 aa0.21□□□□□ -2.38
RPS4XP3-201ENST00000398541 ITPR1Q14643 2758 aa0.21□□□□□ -2.38
RPS4XP3-201ENST00000398541 PLECQ15149 4684 aaKnown RBP0.21□□□□□ -2.38
RPS4XP3-201ENST00000398541 SPRR2FQ96RM1 72 aa0.21□□□□□ -2.38
RPS4XP3-201ENST00000398541 DNAH5Q8TE73 4624 aa0.21□□□□□ -2.38
RPS4XP3-201ENST00000398541 BOD1L1Q8NFC6 3051 aa0.21□□□□□ -2.38
RPS4XP3-201ENST00000398541 DMXL2Q8TDJ6 3036 aa0.21□□□□□ -2.38
RPS4XP3-201ENST00000398541 CRYBG3Q68DQ2 2970 aa0.2□□□□□ -2.38
RPS4XP3-201ENST00000398541 CFAP46Q8IYW2 2715 aa0.2□□□□□ -2.38
RPS4XP3-201ENST00000398541 FAT1Q14517 4588 aa0.2□□□□□ -2.38
RPS4XP3-201ENST00000398541 PRCDQ00LT1 54 aa0.2□□□□□ -2.38
RPS4XP3-201ENST00000398541 RHPN1-AS1Q9BWJ2 59 aa0.2□□□□□ -2.38
RPS4XP3-201ENST00000398541 STARD9Q9P2P6 4700 aa0.2□□□□□ -2.38
RPS4XP3-201ENST00000398541 KMT2CQ8NEZ4 4911 aaKnown RBP0.2□□□□□ -2.38
RPS4XP3-201ENST00000398541 LAMA1P25391 3075 aa0.2□□□□□ -2.38
RPS4XP3-201ENST00000398541 MGAQ8IWI9 3026 aa0.2□□□□□ -2.38
RPS4XP3-201ENST00000398541 MUC17Q685J3 4493 aa0.2□□□□□ -2.38
RPS4XP3-201ENST00000398541 ITPR3Q14573 2671 aa0.2□□□□□ -2.38
RPS4XP3-201ENST00000398541 RYR2Q92736 4967 aa0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms