RNA–Protein interactions for RNA: ENST00000397661.6

NFIX-203, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 3,143 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-203ENST00000397661 COX6B2Q6YFQ2 88 aa11.42□□□□□ -0.58
NFIX-203ENST00000397661 FAT3Q8TDW7 4589 aa11.41□□□□□ -0.58
NFIX-203ENST00000397661 Q5VSD8 79 aa11.38□□□□□ -0.59
NFIX-203ENST00000397661 K7ERS5 55 aa11.32□□□□□ -0.6
NFIX-203ENST00000397661 KRTAP10-8P60410 259 aa11.32□□□□□ -0.6
NFIX-203ENST00000397661 ROMO1P60602 79 aa11.31□□□□□ -0.6
NFIX-203ENST00000397661 KIAA1109Q2LD37 5005 aa11.3□□□□□ -0.6
NFIX-203ENST00000397661 TNXBP22105 4242 aa11.3□□□□□ -0.6
NFIX-203ENST00000397661 RYR3Q15413 4870 aa11.26□□□□□ -0.61
NFIX-203ENST00000397661 KRTAP17-1Q9BYP8 105 aa11.26□□□□□ -0.61
NFIX-203ENST00000397661 KRTAP21-3Q3LHN1 58 aa11.25□□□□□ -0.61
NFIX-203ENST00000397661 LPAP08519 4548 aa11.23□□□□□ -0.61
NFIX-203ENST00000397661 XP32Q5T750 250 aa11.21□□□□□ -0.61
NFIX-203ENST00000397661 C10orf95Q9H7T3 257 aa11.19□□□□□ -0.62
NFIX-203ENST00000397661 RPL37P61927 97 aaKnown RBP11.17□□□□□ -0.62
NFIX-203ENST00000397661 KRTAP13-4Q3LI77 160 aa11.16□□□□□ -0.62
NFIX-203ENST00000397661 KRTAP3-3Q9BYR6 98 aa11.16□□□□□ -0.62
NFIX-203ENST00000397661 LRP2P98164 4655 aa11.13□□□□□ -0.63
NFIX-203ENST00000397661 S4R3F8 94 aa11.11□□□□□ -0.63
NFIX-203ENST00000397661 RYR1P21817 5038 aa11.1□□□□□ -0.63
NFIX-203ENST00000397661 KRTAP10-6P60371 365 aaPredicted RBP11.09□□□□□ -0.63
NFIX-203ENST00000397661 P0C880 135 aa11.08□□□□□ -0.64
NFIX-203ENST00000397661 SPINT4Q6UDR6 99 aa11.02□□□□□ -0.65
NFIX-203ENST00000397661 TPRXLQ17RH7 258 aa11□□□□□ -0.65
NFIX-203ENST00000397661 KRTAP3-2Q9BYR7 98 aa10.99□□□□□ -0.65
NFIX-203ENST00000397661 MT1HL1P0DM35 61 aa10.93□□□□□ -0.66
NFIX-203ENST00000397661 EPPK1P58107 5090 aaKnown RBP10.92□□□□□ -0.66
NFIX-203ENST00000397661 ABCA13Q86UQ4 5058 aa10.91□□□□□ -0.66
NFIX-203ENST00000397661 KRTAP12-2P59991 146 aa10.82□□□□□ -0.68
NFIX-203ENST00000397661 KRTAP4-5Q9BYR2 181 aa10.75□□□□□ -0.69
NFIX-203ENST00000397661 NDUFAF8A1L188 74 aa10.69□□□□□ -0.7
NFIX-203ENST00000397661 KRTAP12-1P59990 96 aa10.62□□□□□ -0.71
NFIX-203ENST00000397661 KRTAP15-1Q3LI76 137 aa10.53□□□□□ -0.72
NFIX-203ENST00000397661 MUC2Q02817 5179 aa10.53□□□□□ -0.72
NFIX-203ENST00000397661 M0QZ58 72 aa10.52□□□□□ -0.72
NFIX-203ENST00000397661 R4GN34 69 aa10.44□□□□□ -0.74
NFIX-203ENST00000397661 J3QL48 77 aa10.39□□□□□ -0.75
NFIX-203ENST00000397661 LORP23490 312 aaPredicted RBP10.39□□□□□ -0.75
NFIX-203ENST00000397661 KRTAP4-1Q9BYQ7 146 aa10.36□□□□□ -0.75
NFIX-203ENST00000397661 HERC2O95714 4834 aa10.33□□□□□ -0.76
NFIX-203ENST00000397661 SEC61BP60468 96 aaKnown RBP10.28□□□□□ -0.76
NFIX-203ENST00000397661 MUC17Q685J3 4493 aa10.25□□□□□ -0.77
NFIX-203ENST00000397661 HERC1Q15751 4861 aa10.04□□□□□ -0.8
NFIX-203ENST00000397661 PLAC4Q8WY50 150 aa10□□□□□ -0.81
NFIX-203ENST00000397661 CAMK2N1Q7Z7J9 78 aa10□□□□□ -0.81
NFIX-203ENST00000397661 FAT4Q6V0I7 4981 aa9.97□□□□□ -0.81
NFIX-203ENST00000397661 KRTAP19-2Q3LHN2 52 aa9.88□□□□□ -0.83
NFIX-203ENST00000397661 PCLOQ9Y6V0 5065 aa9.86□□□□□ -0.83
NFIX-203ENST00000397661 RNF213Q63HN8 5207 aa9.78□□□□□ -0.84
NFIX-203ENST00000397661 FLGP20930 4061 aaPredicted RBP9.72□□□□□ -0.85
NFIX-203ENST00000397661 BIRC6Q9NR09 4857 aa9.68□□□□□ -0.86
NFIX-203ENST00000397661 LUZP6Q538Z0 58 aa9.66□□□□□ -0.86
NFIX-203ENST00000397661 M0R2T5 61 aa9.59□□□□□ -0.87
NFIX-203ENST00000397661 HMCN2Q8NDA2 5059 aa9.58□□□□□ -0.88
NFIX-203ENST00000397661 UBR4Q5T4S7 5183 aa9.52□□□□□ -0.89
NFIX-203ENST00000397661 PP632Q6XCG6 107 aa9.5□□□□□ -0.89
NFIX-203ENST00000397661 TNP1P09430 55 aa9.42□□□□□ -0.9
NFIX-203ENST00000397661 A0A0A0MQY5 61 aa9.38□□□□□ -0.91
NFIX-203ENST00000397661 LCE2CQ5TA81 110 aa9.36□□□□□ -0.91
NFIX-203ENST00000397661 KRTAP10-10P60014 251 aa9.25□□□□□ -0.93
NFIX-203ENST00000397661 KRTAP19-1Q8IUB9 90 aa9.22□□□□□ -0.93
NFIX-203ENST00000397661 MT1HP80294 61 aa9.17□□□□□ -0.94
NFIX-203ENST00000397661 MT1FP04733 61 aa9.12□□□□□ -0.95
NFIX-203ENST00000397661 SPRR2GQ9BYE4 73 aa9.1□□□□□ -0.95
NFIX-203ENST00000397661 MT2AP02795 61 aa9.05□□□□□ -0.96
NFIX-203ENST00000397661 LCE3AQ5TA76 89 aa9.02□□□□□ -0.96
NFIX-203ENST00000397661 SPRR5A0A1B0GTR4 108 aa8.97□□□□□ -0.97
NFIX-203ENST00000397661 KRTAP9-8Q9BYQ0 159 aa8.93□□□□□ -0.98
NFIX-203ENST00000397661 USH2AO75445 5202 aa8.89□□□□□ -0.99
NFIX-203ENST00000397661 KRTAP23-1A1A580 65 aa8.89□□□□□ -0.99
NFIX-203ENST00000397661 KMT2DO14686 5537 aa8.85□□□□□ -0.99
NFIX-203ENST00000397661 MT1BP07438 61 aa8.72□□□□□ -1.01
NFIX-203ENST00000397661 KRTAP10-5P60370 271 aa8.69□□□□□ -1.02
NFIX-203ENST00000397661 MT1XP80297 61 aa8.68□□□□□ -1.02
NFIX-203ENST00000397661 KRTAP19-8Q3LI54 63 aa8.63□□□□□ -1.03
NFIX-203ENST00000397661 KRTAP10-7P60409 375 aaPredicted RBP8.61□□□□□ -1.03
NFIX-203ENST00000397661 KRTAP10-12P60413 245 aa8.58□□□□□ -1.04
NFIX-203ENST00000397661 KRTAP12-3P60328 96 aa8.52□□□□□ -1.05
NFIX-203ENST00000397661 KRTAP9-3Q9BYQ3 159 aa8.51□□□□□ -1.05
NFIX-203ENST00000397661 KRTAP8-1Q8IUC2 63 aa8.51□□□□□ -1.05
NFIX-203ENST00000397661 FSIP2Q5CZC0 6907 aa8.46□□□□□ -1.06
NFIX-203ENST00000397661 PRO2289Q9P1D8 64 aa8.36□□□□□ -1.07
NFIX-203ENST00000397661 LCE2BO14633 110 aa8.31□□□□□ -1.08
NFIX-203ENST00000397661 KRTAP4-8A0A0G2JLE6 195 aa8.23□□□□□ -1.09
NFIX-203ENST00000397661 KRTAP4-8Q9BYQ9 185 aa8.23□□□□□ -1.09
NFIX-203ENST00000397661 KRTAP19-5Q3LI72 72 aa8.23□□□□□ -1.09
NFIX-203ENST00000397661 INE1O15225 51 aa8.17□□□□□ -1.1
NFIX-203ENST00000397661 KRTAP4-7Q9BYR0 210 aa8□□□□□ -1.13
NFIX-203ENST00000397661 LCE3CQ5T5A8 94 aa7.95□□□□□ -1.14
NFIX-203ENST00000397661 DSTQ03001 7570 aaKnown RBP7.93□□□□□ -1.14
NFIX-203ENST00000397661 LCE2AQ5TA79 106 aaPredicted RBP7.9□□□□□ -1.14
NFIX-203ENST00000397661 KRTAP9-6A8MVA2 160 aa7.81□□□□□ -1.16
NFIX-203ENST00000397661 SSPOA2VEC9 5147 aa7.76□□□□□ -1.17
NFIX-203ENST00000397661 KRTAP19-7Q3SYF9 63 aa7.72□□□□□ -1.17
NFIX-203ENST00000397661 FCGBPQ9Y6R7 5405 aaPredicted RBP7.72□□□□□ -1.17
NFIX-203ENST00000397661 OBSCNQ5VST9 7968 aa7.67□□□□□ -1.18
NFIX-203ENST00000397661 MUC12Q9UKN1 5478 aa7.65□□□□□ -1.18
NFIX-203ENST00000397661 CRCT1Q9UGL9 99 aa7.61□□□□□ -1.19
NFIX-203ENST00000397661 SYNE1Q8NF91 8797 aaKnown RBP7.59□□□□□ -1.19
NFIX-203ENST00000397661 MT1LQ93083 61 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms