RNA–Protein interactions for RNA: ENST00000396966.6

SCNN1A-205, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3 BASIC

Gene SCNN1A, Length 2,336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-205ENST00000396966 HERC2O95714 4834 aa9.06□□□□□ -0.96
SCNN1A-205ENST00000396966 ABCA13Q86UQ4 5058 aa9.05□□□□□ -0.96
SCNN1A-205ENST00000396966 KTN1-AS1Q86SY8 53 aa9.02□□□□□ -0.97
SCNN1A-205ENST00000396966 UQCR11O14957 56 aa8.98□□□□□ -0.97
SCNN1A-205ENST00000396966 KRTAP3-1Q9BYR8 98 aa8.98□□□□□ -0.97
SCNN1A-205ENST00000396966 SPATA8Q6RVD6 105 aa8.97□□□□□ -0.97
SCNN1A-205ENST00000396966 MIR22HGQ0VDD5 57 aa8.96□□□□□ -0.97
SCNN1A-205ENST00000396966 COX6B2Q6YFQ2 88 aa8.89□□□□□ -0.99
SCNN1A-205ENST00000396966 LPAP08519 4548 aa8.84□□□□□ -0.99
SCNN1A-205ENST00000396966 SEC61BP60468 96 aaKnown RBP8.81□□□□□ -1
SCNN1A-205ENST00000396966 LRP2P98164 4655 aa8.8□□□□□ -1
SCNN1A-205ENST00000396966 RBM12B-AS1Q9P1G2 102 aa8.75□□□□□ -1.01
SCNN1A-205ENST00000396966 H0YAA0 97 aa8.72□□□□□ -1.01
SCNN1A-205ENST00000396966 A0A1B0GU33 70 aa8.71□□□□□ -1.02
SCNN1A-205ENST00000396966 ADM2Q7Z4H4 148 aa8.71□□□□□ -1.02
SCNN1A-205ENST00000396966 PRAC1Q96KF2 57 aa8.7□□□□□ -1.02
SCNN1A-205ENST00000396966 PCLOQ9Y6V0 5065 aa8.67□□□□□ -1.02
SCNN1A-205ENST00000396966 H1FX-AS1Q4G0G2 97 aa8.66□□□□□ -1.02
SCNN1A-205ENST00000396966 S4R3F8 94 aa8.62□□□□□ -1.03
SCNN1A-205ENST00000396966 KRTAP3-3Q9BYR6 98 aa8.6□□□□□ -1.03
SCNN1A-205ENST00000396966 MUC17Q685J3 4493 aa8.55□□□□□ -1.04
SCNN1A-205ENST00000396966 KRTAP4-1Q9BYQ7 146 aa8.54□□□□□ -1.04
SCNN1A-205ENST00000396966 HERC1Q15751 4861 aa8.49□□□□□ -1.05
SCNN1A-205ENST00000396966 KRTAP10-6P60371 365 aaPredicted RBP8.48□□□□□ -1.05
SCNN1A-205ENST00000396966 CSAG1Q6PB30 78 aa8.45□□□□□ -1.06
SCNN1A-205ENST00000396966 HMCN2Q8NDA2 5059 aa8.45□□□□□ -1.06
SCNN1A-205ENST00000396966 KRTAP3-2Q9BYR7 98 aa8.43□□□□□ -1.06
SCNN1A-205ENST00000396966 KRTAP13-4Q3LI77 160 aa8.4□□□□□ -1.06
SCNN1A-205ENST00000396966 K7ERS5 55 aa8.38□□□□□ -1.07
SCNN1A-205ENST00000396966 P0C880 135 aa8.36□□□□□ -1.07
SCNN1A-205ENST00000396966 A0A0D9SG42 100 aa8.36□□□□□ -1.07
SCNN1A-205ENST00000396966 KRTAP19-2Q3LHN2 52 aa8.32□□□□□ -1.08
SCNN1A-205ENST00000396966 LINC01554Q52M75 96 aa8.32□□□□□ -1.08
SCNN1A-205ENST00000396966 CRIPTQ9P021 101 aa8.22□□□□□ -1.09
SCNN1A-205ENST00000396966 KRTAP25-1Q3LHN0 102 aa8.21□□□□□ -1.1
SCNN1A-205ENST00000396966 MUC2Q02817 5179 aa8.19□□□□□ -1.1
SCNN1A-205ENST00000396966 ROMO1P60602 79 aa8.17□□□□□ -1.1
SCNN1A-205ENST00000396966 H3BS24 57 aa8.12□□□□□ -1.11
SCNN1A-205ENST00000396966 KRTAP12-2P59991 146 aa8.12□□□□□ -1.11
SCNN1A-205ENST00000396966 LCE2CQ5TA81 110 aa8.08□□□□□ -1.12
SCNN1A-205ENST00000396966 SPINT4Q6UDR6 99 aa8.08□□□□□ -1.12
SCNN1A-205ENST00000396966 FLGP20930 4061 aaPredicted RBP8.07□□□□□ -1.12
SCNN1A-205ENST00000396966 M0QZ58 72 aa8.05□□□□□ -1.12
SCNN1A-205ENST00000396966 KRTAP12-1P59990 96 aa8.05□□□□□ -1.12
SCNN1A-205ENST00000396966 UBR4Q5T4S7 5183 aa8.02□□□□□ -1.13
SCNN1A-205ENST00000396966 RNF213Q63HN8 5207 aa8.02□□□□□ -1.13
SCNN1A-205ENST00000396966 R4GN34 69 aa7.96□□□□□ -1.13
SCNN1A-205ENST00000396966 M0R2T5 61 aa7.94□□□□□ -1.14
SCNN1A-205ENST00000396966 MT1HP80294 61 aa7.93□□□□□ -1.14
SCNN1A-205ENST00000396966 C10orf95Q9H7T3 257 aa7.92□□□□□ -1.14
SCNN1A-205ENST00000396966 LORP23490 312 aaPredicted RBP7.89□□□□□ -1.15
SCNN1A-205ENST00000396966 FAT4Q6V0I7 4981 aa7.84□□□□□ -1.15
SCNN1A-205ENST00000396966 MT2AP02795 61 aa7.65□□□□□ -1.18
SCNN1A-205ENST00000396966 KRTAP9-8Q9BYQ0 159 aa7.65□□□□□ -1.18
SCNN1A-205ENST00000396966 KRTAP10-10P60014 251 aa7.63□□□□□ -1.19
SCNN1A-205ENST00000396966 MT1FP04733 61 aa7.61□□□□□ -1.19
SCNN1A-205ENST00000396966 SPRR2GQ9BYE4 73 aa7.58□□□□□ -1.2
SCNN1A-205ENST00000396966 KRTAP19-1Q8IUB9 90 aa7.53□□□□□ -1.2
SCNN1A-205ENST00000396966 CAMK2N1Q7Z7J9 78 aa7.52□□□□□ -1.2
SCNN1A-205ENST00000396966 LCE2AQ5TA79 106 aaPredicted RBP7.49□□□□□ -1.21
SCNN1A-205ENST00000396966 KRTAP15-1Q3LI76 137 aa7.46□□□□□ -1.22
SCNN1A-205ENST00000396966 PLAC4Q8WY50 150 aa7.43□□□□□ -1.22
SCNN1A-205ENST00000396966 KRTAP9-3Q9BYQ3 159 aa7.36□□□□□ -1.23
SCNN1A-205ENST00000396966 KRTAP19-8Q3LI54 63 aa7.35□□□□□ -1.23
SCNN1A-205ENST00000396966 PP632Q6XCG6 107 aa7.27□□□□□ -1.25
SCNN1A-205ENST00000396966 NDUFAF8A1L188 74 aa7.24□□□□□ -1.25
SCNN1A-205ENST00000396966 MT1BP07438 61 aa7.23□□□□□ -1.25
SCNN1A-205ENST00000396966 TNP1P09430 55 aa7.19□□□□□ -1.26
SCNN1A-205ENST00000396966 LCE2BO14633 110 aa7.13□□□□□ -1.27
SCNN1A-205ENST00000396966 KRTAP23-1A1A580 65 aa7.09□□□□□ -1.28
SCNN1A-205ENST00000396966 KRTAP10-5P60370 271 aa7.04□□□□□ -1.28
SCNN1A-205ENST00000396966 MT1XP80297 61 aa7.04□□□□□ -1.28
SCNN1A-205ENST00000396966 A0A0A0MQY5 61 aa7.01□□□□□ -1.29
SCNN1A-205ENST00000396966 PRO2289Q9P1D8 64 aa7□□□□□ -1.29
SCNN1A-205ENST00000396966 LCE3AQ5TA76 89 aa6.85□□□□□ -1.31
SCNN1A-205ENST00000396966 LUZP6Q538Z0 58 aa6.84□□□□□ -1.31
SCNN1A-205ENST00000396966 USH2AO75445 5202 aa6.83□□□□□ -1.32
SCNN1A-205ENST00000396966 KRTAP10-7P60409 375 aaPredicted RBP6.77□□□□□ -1.33
SCNN1A-205ENST00000396966 KRTAP10-12P60413 245 aa6.76□□□□□ -1.33
SCNN1A-205ENST00000396966 SPRR5A0A1B0GTR4 108 aa6.76□□□□□ -1.33
SCNN1A-205ENST00000396966 LCE2DQ5TA82 110 aaPredicted RBP6.75□□□□□ -1.33
SCNN1A-205ENST00000396966 KRTAP19-6Q3LI70 58 aa6.66□□□□□ -1.34
SCNN1A-205ENST00000396966 KRTAP8-1Q8IUC2 63 aa6.65□□□□□ -1.35
SCNN1A-205ENST00000396966 SSPOA2VEC9 5147 aa6.63□□□□□ -1.35
SCNN1A-205ENST00000396966 KRTAP12-3P60328 96 aa6.52□□□□□ -1.37
SCNN1A-205ENST00000396966 FSIP2Q5CZC0 6907 aa6.5□□□□□ -1.37
SCNN1A-205ENST00000396966 KRTAP4-8A0A0G2JLE6 195 aa6.47□□□□□ -1.37
SCNN1A-205ENST00000396966 KRTAP4-8Q9BYQ9 185 aa6.47□□□□□ -1.37
SCNN1A-205ENST00000396966 KRTAP19-5Q3LI72 72 aa6.41□□□□□ -1.38
SCNN1A-205ENST00000396966 KMT2DO14686 5537 aa6.4□□□□□ -1.38
SCNN1A-205ENST00000396966 KRTAP9-2Q9BYQ4 174 aa6.4□□□□□ -1.38
SCNN1A-205ENST00000396966 FCGBPQ9Y6R7 5405 aaPredicted RBP6.28□□□□□ -1.4
SCNN1A-205ENST00000396966 KRTAP19-7Q3SYF9 63 aa6.27□□□□□ -1.41
SCNN1A-205ENST00000396966 CRCT1Q9UGL9 99 aa6.21□□□□□ -1.42
SCNN1A-205ENST00000396966 MT1EP04732 61 aa6.16□□□□□ -1.42
SCNN1A-205ENST00000396966 LCE3CQ5T5A8 94 aa6.13□□□□□ -1.43
SCNN1A-205ENST00000396966 KRTAP19-4Q3LI73 84 aa6.08□□□□□ -1.44
SCNN1A-205ENST00000396966 MT1LQ93083 61 aa6.07□□□□□ -1.44
SCNN1A-205ENST00000396966 MACF1Q9UPN3 7388 aaKnown RBP6.02□□□□□ -1.45
SCNN1A-205ENST00000396966 SPRR2FQ96RM1 72 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 230.1 ms