RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 NBEAL1Q6ZS30 2694 aa1.84□□□□□ -2.12
GABPB1-204ENST00000396464 M0QY20 66 aa1.83□□□□□ -2.12
GABPB1-204ENST00000396464 KCNQ1DNQ9H478 68 aa1.83□□□□□ -2.12
GABPB1-204ENST00000396464 CMYA5Q8N3K9 4069 aa1.83□□□□□ -2.12
GABPB1-204ENST00000396464 H3BNG1 76 aa1.83□□□□□ -2.12
GABPB1-204ENST00000396464 KRTAP12-3P60328 96 aa1.83□□□□□ -2.12
GABPB1-204ENST00000396464 COL7A1Q02388 2944 aa1.82□□□□□ -2.12
GABPB1-204ENST00000396464 K7EQZ3 153 aa1.82□□□□□ -2.12
GABPB1-204ENST00000396464 RPL39P62891 51 aaKnown RBP1.82□□□□□ -2.12
GABPB1-204ENST00000396464 LELP1Q5T871 98 aa1.82□□□□□ -2.12
GABPB1-204ENST00000396464 WFDC10BQ8IUB3 73 aa1.82□□□□□ -2.12
GABPB1-204ENST00000396464 TOMM7Q9P0U1 55 aa1.82□□□□□ -2.12
GABPB1-204ENST00000396464 NBEAL2Q6ZNJ1 2754 aa1.81□□□□□ -2.12
GABPB1-204ENST00000396464 FBN3Q75N90 2809 aa1.8□□□□□ -2.12
GABPB1-204ENST00000396464 NOTCH1P46531 2555 aa1.8□□□□□ -2.12
GABPB1-204ENST00000396464 ETDCA0A1B0GVM5 59 aa1.8□□□□□ -2.12
GABPB1-204ENST00000396464 PLNP26678 52 aa1.8□□□□□ -2.12
GABPB1-204ENST00000396464 POLR2KP53803 58 aaKnown RBP1.8□□□□□ -2.12
GABPB1-204ENST00000396464 APLNQ9ULZ1 77 aa1.8□□□□□ -2.12
GABPB1-204ENST00000396464 DNAH3Q8TD57 4116 aa1.79□□□□□ -2.12
GABPB1-204ENST00000396464 LINC01556Q5JQF7 62 aa1.79□□□□□ -2.12
GABPB1-204ENST00000396464 MGAM2Q2M2H8 2515 aa1.79□□□□□ -2.12
GABPB1-204ENST00000396464 TGP01266 2768 aa1.77□□□□□ -2.13
GABPB1-204ENST00000396464 MRPL34Q9BQ48 92 aaKnown RBP1.77□□□□□ -2.13
GABPB1-204ENST00000396464 HUWE1Q7Z6Z7 4374 aaKnown RBP1.77□□□□□ -2.13
GABPB1-204ENST00000396464 TENM3Q9P273 2699 aa1.77□□□□□ -2.13
GABPB1-204ENST00000396464 LINC01546A6NGU7 62 aa1.76□□□□□ -2.13
GABPB1-204ENST00000396464 IGIPA6NJ69 53 aa1.76□□□□□ -2.13
GABPB1-204ENST00000396464 NDUFA1O15239 70 aa1.76□□□□□ -2.13
GABPB1-204ENST00000396464 COX6A2Q02221 97 aa1.76□□□□□ -2.13
GABPB1-204ENST00000396464 CDKN2A-AS1Q9UH64 79 aa1.76□□□□□ -2.13
GABPB1-204ENST00000396464 DNAH9Q9NYC9 4486 aa1.76□□□□□ -2.13
GABPB1-204ENST00000396464 LINC00158P58513 81 aa1.75□□□□□ -2.13
GABPB1-204ENST00000396464 KRTAP21-2Q3LI59 83 aa1.75□□□□□ -2.13
GABPB1-204ENST00000396464 PRKDCP78527 4128 aaKnown RBP1.75□□□□□ -2.13
GABPB1-204ENST00000396464 LYSTQ99698 3801 aa1.75□□□□□ -2.13
GABPB1-204ENST00000396464 A0A0D9SG42 100 aa1.74□□□□□ -2.13
GABPB1-204ENST00000396464 Q8IZM0 81 aa1.74□□□□□ -2.13
GABPB1-204ENST00000396464 STARD9Q9P2P6 4700 aa1.74□□□□□ -2.13
GABPB1-204ENST00000396464 TENM2Q9NT68 2774 aa1.74□□□□□ -2.13
GABPB1-204ENST00000396464 CSMD3Q7Z407 3707 aa1.73□□□□□ -2.13
GABPB1-204ENST00000396464 PLECQ15149 4684 aaKnown RBP1.72□□□□□ -2.13
GABPB1-204ENST00000396464 C6orf48Q9UBA6 75 aa1.72□□□□□ -2.13
GABPB1-204ENST00000396464 DNAH7Q8WXX0 4024 aa1.71□□□□□ -2.13
GABPB1-204ENST00000396464 STAB2Q8WWQ8 2551 aa1.71□□□□□ -2.13
GABPB1-204ENST00000396464 ALMS1Q8TCU4 4167 aa1.71□□□□□ -2.14
GABPB1-204ENST00000396464 A0A096LNI7 61 aa1.7□□□□□ -2.14
GABPB1-204ENST00000396464 KRTAP10-4P60372 401 aaPredicted RBP1.7□□□□□ -2.14
GABPB1-204ENST00000396464 DNAH1Q9P2D7 4330 aa1.7□□□□□ -2.14
GABPB1-204ENST00000396464 LINC00308Q8TCZ7 52 aa1.69□□□□□ -2.14
GABPB1-204ENST00000396464 DYNC2H1Q8NCM8 4307 aaKnown RBP1.69□□□□□ -2.14
GABPB1-204ENST00000396464 COX6B2Q6YFQ2 88 aa1.68□□□□□ -2.14
GABPB1-204ENST00000396464 DNAH10Q8IVF4 4471 aa1.68□□□□□ -2.14
GABPB1-204ENST00000396464 SMR3BP02814 79 aaPredicted RBP1.67□□□□□ -2.14
GABPB1-204ENST00000396464 VPS13DQ5THJ4 4388 aa1.67□□□□□ -2.14
GABPB1-204ENST00000396464 SPRR1AP35321 89 aa1.66□□□□□ -2.14
GABPB1-204ENST00000396464 SACSQ9NZJ4 4579 aa1.66□□□□□ -2.14
GABPB1-204ENST00000396464 PRLHP81277 87 aa1.66□□□□□ -2.14
GABPB1-204ENST00000396464 Q5VSD8 79 aa1.66□□□□□ -2.14
GABPB1-204ENST00000396464 DEFB105AQ8NG35 78 aa1.66□□□□□ -2.14
GABPB1-204ENST00000396464 DNAH2Q9P225 4427 aa1.66□□□□□ -2.14
GABPB1-204ENST00000396464 FRAS1Q86XX4 4008 aa1.65□□□□□ -2.15
GABPB1-204ENST00000396464 KMT2CQ8NEZ4 4911 aaKnown RBP1.64□□□□□ -2.15
GABPB1-204ENST00000396464 HYDINQ4G0P3 5121 aa1.64□□□□□ -2.15
GABPB1-204ENST00000396464 H0YGX0 51 aa1.64□□□□□ -2.15
GABPB1-204ENST00000396464 KMT2AQ03164 3969 aa1.64□□□□□ -2.15
GABPB1-204ENST00000396464 DNAH6Q9C0G6 4158 aa1.63□□□□□ -2.15
GABPB1-204ENST00000396464 RYR2Q92736 4967 aa1.63□□□□□ -2.15
GABPB1-204ENST00000396464 RYR3Q15413 4870 aa1.63□□□□□ -2.15
GABPB1-204ENST00000396464 PKD1P98161 4303 aa1.62□□□□□ -2.15
GABPB1-204ENST00000396464 DNAH17Q9UFH2 4485 aa1.62□□□□□ -2.15
GABPB1-204ENST00000396464 HECTD4Q9Y4D8 3996 aa1.62□□□□□ -2.15
GABPB1-204ENST00000396464 H0YAA0 97 aa1.6□□□□□ -2.15
GABPB1-204ENST00000396464 SPRR1BP22528 89 aa1.6□□□□□ -2.15
GABPB1-204ENST00000396464 H1FX-AS1Q4G0G2 97 aa1.6□□□□□ -2.15
GABPB1-204ENST00000396464 SPINK6Q6UWN8 80 aa1.6□□□□□ -2.15
GABPB1-204ENST00000396464 FAT2Q9NYQ8 4349 aa1.6□□□□□ -2.15
GABPB1-204ENST00000396464 PKHD1P08F94 4074 aa1.59□□□□□ -2.15
GABPB1-204ENST00000396464 DNAH5Q8TE73 4624 aa1.59□□□□□ -2.15
GABPB1-204ENST00000396464 DNAH11Q96DT5 4516 aa1.59□□□□□ -2.16
GABPB1-204ENST00000396464 DNAH8Q96JB1 4490 aa1.58□□□□□ -2.16
GABPB1-204ENST00000396464 CRCT1Q9UGL9 99 aa1.57□□□□□ -2.16
GABPB1-204ENST00000396464 DYNC1H1Q14204 4646 aaKnown RBP1.57□□□□□ -2.16
GABPB1-204ENST00000396464 IGLV5-48A0A075B6I7 105 aa1.57□□□□□ -2.16
GABPB1-204ENST00000396464 APOBP04114 4563 aaKnown RBP1.56□□□□□ -2.16
GABPB1-204ENST00000396464 WFDC13Q8IUB5 93 aa1.56□□□□□ -2.16
GABPB1-204ENST00000396464 LRP1BQ9NZR2 4599 aa1.55□□□□□ -2.16
GABPB1-204ENST00000396464 EPPK1P58107 5090 aaKnown RBP1.55□□□□□ -2.16
GABPB1-204ENST00000396464 SPINK1P00995 79 aa1.55□□□□□ -2.16
GABPB1-204ENST00000396464 SRRM2Q9UQ35 2752 aaKnown RBP1.54□□□□□ -2.16
GABPB1-204ENST00000396464 HSPG2P98160 4391 aa1.52□□□□□ -2.17
GABPB1-204ENST00000396464 C9orf92A6NGG3 77 aa1.52□□□□□ -2.17
GABPB1-204ENST00000396464 BIRC6Q9NR09 4857 aa1.51□□□□□ -2.17
GABPB1-204ENST00000396464 FAT1Q14517 4588 aa1.51□□□□□ -2.17
GABPB1-204ENST00000396464 RPS29P62273 56 aaKnown RBP1.5□□□□□ -2.17
GABPB1-204ENST00000396464 VPS13BQ7Z7G8 4022 aa1.5□□□□□ -2.17
GABPB1-204ENST00000396464 RYR1P21817 5038 aa1.5□□□□□ -2.17
GABPB1-204ENST00000396464 KIAA1109Q2LD37 5005 aa1.49□□□□□ -2.17
GABPB1-204ENST00000396464 PKHD1L1Q86WI1 4243 aa1.49□□□□□ -2.17
GABPB1-204ENST00000396464 MYCBP2O75592 4640 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms