RNA–Protein interactions for RNA: ENST00000395856.3

NCOA1-203, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,828 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-203ENST00000395856 DNAH8Q96JB1 4490 aa2.05□□□□□ -2.08
NCOA1-203ENST00000395856 KRTAP23-1A1A580 65 aa2.05□□□□□ -2.08
NCOA1-203ENST00000395856 SACSQ9NZJ4 4579 aa2.04□□□□□ -2.08
NCOA1-203ENST00000395856 LORP23490 312 aaPredicted RBP2.04□□□□□ -2.08
NCOA1-203ENST00000395856 MYCBP2O75592 4640 aa2.04□□□□□ -2.08
NCOA1-203ENST00000395856 STARD9Q9P2P6 4700 aa2.04□□□□□ -2.08
NCOA1-203ENST00000395856 GCN1Q92616 2671 aaKnown RBP2.04□□□□□ -2.08
NCOA1-203ENST00000395856 VPS13DQ5THJ4 4388 aa2.03□□□□□ -2.08
NCOA1-203ENST00000395856 RYR2Q92736 4967 aa2.03□□□□□ -2.08
NCOA1-203ENST00000395856 DNAH11Q96DT5 4516 aa2.03□□□□□ -2.08
NCOA1-203ENST00000395856 KRTAP1-4P0C5Y4 121 aa2.03□□□□□ -2.08
NCOA1-203ENST00000395856 CRCT1Q9UGL9 99 aa2.03□□□□□ -2.09
NCOA1-203ENST00000395856 TENM2Q9NT68 2774 aa2.02□□□□□ -2.09
NCOA1-203ENST00000395856 RYR1P21817 5038 aa2.02□□□□□ -2.09
NCOA1-203ENST00000395856 TPRXLQ17RH7 258 aa2.02□□□□□ -2.09
NCOA1-203ENST00000395856 FAT3Q8TDW7 4589 aa2.01□□□□□ -2.09
NCOA1-203ENST00000395856 COL6A5A8TX70 2615 aa2.01□□□□□ -2.09
NCOA1-203ENST00000395856 TGP01266 2768 aa2.01□□□□□ -2.09
NCOA1-203ENST00000395856 ALMS1Q8TCU4 4167 aa2□□□□□ -2.09
NCOA1-203ENST00000395856 ABCA13Q86UQ4 5058 aa2□□□□□ -2.09
NCOA1-203ENST00000395856 KRTAP15-1Q3LI76 137 aa2□□□□□ -2.09
NCOA1-203ENST00000395856 NBEAL1Q6ZS30 2694 aa1.99□□□□□ -2.09
NCOA1-203ENST00000395856 KRTAP13-3Q3SY46 172 aa1.97□□□□□ -2.09
NCOA1-203ENST00000395856 KRTAP13-4Q3LI77 160 aa1.97□□□□□ -2.09
NCOA1-203ENST00000395856 PLECQ15149 4684 aaKnown RBP1.97□□□□□ -2.09
NCOA1-203ENST00000395856 EPPK1P58107 5090 aaKnown RBP1.97□□□□□ -2.09
NCOA1-203ENST00000395856 FLNAP21333 2647 aaKnown RBP1.96□□□□□ -2.09
NCOA1-203ENST00000395856 KRTAP12-1P59990 96 aa1.96□□□□□ -2.1
NCOA1-203ENST00000395856 HSPG2P98160 4391 aa1.95□□□□□ -2.1
NCOA1-203ENST00000395856 DNAH17Q9UFH2 4485 aa1.95□□□□□ -2.1
NCOA1-203ENST00000395856 NBEAL2Q6ZNJ1 2754 aa1.93□□□□□ -2.1
NCOA1-203ENST00000395856 NSD1Q96L73 2696 aaPredicted RBP1.92□□□□□ -2.1
NCOA1-203ENST00000395856 DNAH5Q8TE73 4624 aa1.92□□□□□ -2.1
NCOA1-203ENST00000395856 PKHD1L1Q86WI1 4243 aa1.91□□□□□ -2.1
NCOA1-203ENST00000395856 MUC2Q02817 5179 aa1.9□□□□□ -2.1
NCOA1-203ENST00000395856 SPRR5A0A1B0GTR4 108 aa1.9□□□□□ -2.11
NCOA1-203ENST00000395856 SRRM2Q9UQ35 2752 aaKnown RBP1.89□□□□□ -2.11
NCOA1-203ENST00000395856 KRTAP3-1Q9BYR8 98 aa1.88□□□□□ -2.11
NCOA1-203ENST00000395856 TNXBP22105 4242 aa1.88□□□□□ -2.11
NCOA1-203ENST00000395856 TENM3Q9P273 2699 aa1.87□□□□□ -2.11
NCOA1-203ENST00000395856 INE1O15225 51 aa1.86□□□□□ -2.11
NCOA1-203ENST00000395856 KRTAP10-4P60372 401 aaPredicted RBP1.86□□□□□ -2.11
NCOA1-203ENST00000395856 LPAP08519 4548 aa1.85□□□□□ -2.11
NCOA1-203ENST00000395856 LRP1BQ9NZR2 4599 aa1.84□□□□□ -2.12
NCOA1-203ENST00000395856 KRTAP10-5P60370 271 aa1.83□□□□□ -2.12
NCOA1-203ENST00000395856 KRTAP8-1Q8IUC2 63 aa1.82□□□□□ -2.12
NCOA1-203ENST00000395856 KRTAP10-12P60413 245 aa1.82□□□□□ -2.12
NCOA1-203ENST00000395856 APOBP04114 4563 aaKnown RBP1.81□□□□□ -2.12
NCOA1-203ENST00000395856 HERC1Q15751 4861 aa1.81□□□□□ -2.12
NCOA1-203ENST00000395856 RNF213Q63HN8 5207 aa1.8□□□□□ -2.12
NCOA1-203ENST00000395856 LCE3AQ5TA76 89 aa1.8□□□□□ -2.12
NCOA1-203ENST00000395856 LCE2DQ5TA82 110 aaPredicted RBP1.79□□□□□ -2.12
NCOA1-203ENST00000395856 BIRC6Q9NR09 4857 aa1.79□□□□□ -2.12
NCOA1-203ENST00000395856 DYNC1H1Q14204 4646 aaKnown RBP1.78□□□□□ -2.12
NCOA1-203ENST00000395856 SPRR2EP22531 72 aa1.76□□□□□ -2.13
NCOA1-203ENST00000395856 SPRR2BP35325 72 aa1.76□□□□□ -2.13
NCOA1-203ENST00000395856 SPRR2AP35326 72 aa1.76□□□□□ -2.13
NCOA1-203ENST00000395856 UBR4Q5T4S7 5183 aa1.76□□□□□ -2.13
NCOA1-203ENST00000395856 KRTAP12-3P60328 96 aa1.76□□□□□ -2.13
NCOA1-203ENST00000395856 KRTAP3-3Q9BYR6 98 aa1.75□□□□□ -2.13
NCOA1-203ENST00000395856 KRTAP3-2Q9BYR7 98 aa1.75□□□□□ -2.13
NCOA1-203ENST00000395856 FAT4Q6V0I7 4981 aa1.74□□□□□ -2.13
NCOA1-203ENST00000395856 SPRR2FQ96RM1 72 aa1.74□□□□□ -2.13
NCOA1-203ENST00000395856 KIAA1109Q2LD37 5005 aa1.73□□□□□ -2.13
NCOA1-203ENST00000395856 LRP1Q07954 4544 aaKnown RBP1.72□□□□□ -2.13
NCOA1-203ENST00000395856 KRTAP4-5Q9BYR2 181 aa1.72□□□□□ -2.13
NCOA1-203ENST00000395856 KRTAP19-4Q3LI73 84 aa1.71□□□□□ -2.13
NCOA1-203ENST00000395856 SPRR2DP22532 72 aa1.71□□□□□ -2.14
NCOA1-203ENST00000395856 FLGP20930 4061 aaPredicted RBP1.71□□□□□ -2.14
NCOA1-203ENST00000395856 MT3P25713 68 aa1.7□□□□□ -2.14
NCOA1-203ENST00000395856 FAT1Q14517 4588 aa1.7□□□□□ -2.14
NCOA1-203ENST00000395856 KRTAP9-6A0A140TA67 174 aa1.69□□□□□ -2.14
NCOA1-203ENST00000395856 HMCN2Q8NDA2 5059 aa1.68□□□□□ -2.14
NCOA1-203ENST00000395856 HERC2O95714 4834 aa1.68□□□□□ -2.14
NCOA1-203ENST00000395856 MUC5BQ9HC84 5762 aaPredicted RBP1.68□□□□□ -2.14
NCOA1-203ENST00000395856 MT1HL1P0DM35 61 aa1.65□□□□□ -2.15
NCOA1-203ENST00000395856 KRTAP20-1Q3LI63 56 aa1.63□□□□□ -2.15
NCOA1-203ENST00000395856 LOC100996750A0A140TA64 210 aa1.63□□□□□ -2.15
NCOA1-203ENST00000395856 KRTAP4-6Q9BYQ5 205 aa1.63□□□□□ -2.15
NCOA1-203ENST00000395856 LRP2P98164 4655 aa1.61□□□□□ -2.15
NCOA1-203ENST00000395856 LCE2BO14633 110 aa1.61□□□□□ -2.15
NCOA1-203ENST00000395856 LCE2CQ5TA81 110 aa1.61□□□□□ -2.15
NCOA1-203ENST00000395856 KRTAP9-2Q9BYQ4 174 aa1.61□□□□□ -2.15
NCOA1-203ENST00000395856 MUC17Q685J3 4493 aa1.6□□□□□ -2.15
NCOA1-203ENST00000395856 SPRR2GQ9BYE4 73 aa1.6□□□□□ -2.15
NCOA1-203ENST00000395856 KRTAP12-4P60329 112 aa1.59□□□□□ -2.15
NCOA1-203ENST00000395856 KRTAP19-5Q3LI72 72 aa1.58□□□□□ -2.16
NCOA1-203ENST00000395856 GPR98Q8WXG9 6306 aa1.56□□□□□ -2.16
NCOA1-203ENST00000395856 USH2AO75445 5202 aa1.56□□□□□ -2.16
NCOA1-203ENST00000395856 LCE3BQ5TA77 95 aa1.55□□□□□ -2.16
NCOA1-203ENST00000395856 KRTAP9-7A8MTY7 169 aa1.55□□□□□ -2.16
NCOA1-203ENST00000395856 LCE3CQ5T5A8 94 aa1.54□□□□□ -2.16
NCOA1-203ENST00000395856 KRTAP4-1Q9BYQ7 146 aa1.54□□□□□ -2.16
NCOA1-203ENST00000395856 MT1HP80294 61 aa1.52□□□□□ -2.17
NCOA1-203ENST00000395856 MT4P47944 62 aa1.52□□□□□ -2.17
NCOA1-203ENST00000395856 LCE4AQ5TA78 99 aa1.51□□□□□ -2.17
NCOA1-203ENST00000395856 LCE2AQ5TA79 106 aaPredicted RBP1.51□□□□□ -2.17
NCOA1-203ENST00000395856 HMCN1Q96RW7 5635 aa1.49□□□□□ -2.17
NCOA1-203ENST00000395856 MT2AP02795 61 aa1.48□□□□□ -2.17
NCOA1-203ENST00000395856 MT1GP13640 62 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms