RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 CSAG1Q6PB30 78 aa9.32□□□□□ -0.92
SNCA-203ENST00000394986 USH2AO75445 5202 aa9.3□□□□□ -0.92
SNCA-203ENST00000394986 TRAV7A0A075B6U4 112 aa9.3□□□□□ -0.92
SNCA-203ENST00000394986 SMIM20Q8N5G0 67 aa9.28□□□□□ -0.92
SNCA-203ENST00000394986 A8MUN3 132 aa9.25□□□□□ -0.93
SNCA-203ENST00000394986 NDUFC1O43677 76 aa9.16□□□□□ -0.94
SNCA-203ENST00000394986 DMAC1Q96GE9 116 aa9.14□□□□□ -0.95
SNCA-203ENST00000394986 SNURFQ9Y675 71 aa9.14□□□□□ -0.95
SNCA-203ENST00000394986 SSPOA2VEC9 5147 aa9.13□□□□□ -0.95
SNCA-203ENST00000394986 SERP2Q8N6R1 65 aa9.1□□□□□ -0.95
SNCA-203ENST00000394986 C20orf197Q8N268 126 aa9.07□□□□□ -0.96
SNCA-203ENST00000394986 KRTAP19-1Q8IUB9 90 aa9.05□□□□□ -0.96
SNCA-203ENST00000394986 H0YAA0 97 aa8.98□□□□□ -0.97
SNCA-203ENST00000394986 ACYP2P14621 99 aa8.96□□□□□ -0.98
SNCA-203ENST00000394986 ADM2Q7Z4H4 148 aa8.96□□□□□ -0.98
SNCA-203ENST00000394986 SPRR2GQ9BYE4 73 aa8.95□□□□□ -0.98
SNCA-203ENST00000394986 COX7CP15954 63 aa8.91□□□□□ -0.98
SNCA-203ENST00000394986 SPANXA2-OT1Q8N9U9 137 aa8.88□□□□□ -0.99
SNCA-203ENST00000394986 KRTAP19-6Q3LI70 58 aa8.87□□□□□ -0.99
SNCA-203ENST00000394986 CRIPTQ9P021 101 aa8.87□□□□□ -0.99
SNCA-203ENST00000394986 FCGBPQ9Y6R7 5405 aaPredicted RBP8.86□□□□□ -0.99
SNCA-203ENST00000394986 KRTAP19-8Q3LI54 63 aa8.85□□□□□ -0.99
SNCA-203ENST00000394986 MT1BP07438 61 aa8.84□□□□□ -0.99
SNCA-203ENST00000394986 CHKB-CPT1BH3BT56 60 aa8.82□□□□□ -1
SNCA-203ENST00000394986 Q5VV11 94 aa8.82□□□□□ -1
SNCA-203ENST00000394986 P0C880 135 aa8.81□□□□□ -1
SNCA-203ENST00000394986 CYSTM1Q9H1C7 97 aa8.8□□□□□ -1
SNCA-203ENST00000394986 ANAPC13Q9BS18 74 aa8.78□□□□□ -1
SNCA-203ENST00000394986 SPTSSBQ8NFR3 76 aa8.76□□□□□ -1.01
SNCA-203ENST00000394986 H7BZZ5 65 aa8.73□□□□□ -1.01
SNCA-203ENST00000394986 LOC100996750A0A140TA64 210 aa8.7□□□□□ -1.02
SNCA-203ENST00000394986 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.7□□□□□ -1.02
SNCA-203ENST00000394986 KRTAP4-6Q9BYQ5 205 aa8.7□□□□□ -1.02
SNCA-203ENST00000394986 R4GN34 69 aa8.68□□□□□ -1.02
SNCA-203ENST00000394986 COA5Q86WW8 74 aa8.67□□□□□ -1.02
SNCA-203ENST00000394986 CCDC179H3BU77 68 aa8.64□□□□□ -1.03
SNCA-203ENST00000394986 M0QZ58 72 aa8.64□□□□□ -1.03
SNCA-203ENST00000394986 SVIPQ8NHG7 77 aa8.62□□□□□ -1.03
SNCA-203ENST00000394986 A6NN06 94 aa8.6□□□□□ -1.03
SNCA-203ENST00000394986 KRTAP10-5P60370 271 aa8.54□□□□□ -1.04
SNCA-203ENST00000394986 LINC01554Q52M75 96 aa8.54□□□□□ -1.04
SNCA-203ENST00000394986 MACF1Q9UPN3 7388 aaKnown RBP8.52□□□□□ -1.05
SNCA-203ENST00000394986 KRTAP9-7A8MTY7 169 aa8.48□□□□□ -1.05
SNCA-203ENST00000394986 PLAC4Q8WY50 150 aa8.46□□□□□ -1.05
SNCA-203ENST00000394986 SYNE2Q8WXH0 6885 aaKnown RBP8.39□□□□□ -1.07
SNCA-203ENST00000394986 KRTAP13-4Q3LI77 160 aa8.38□□□□□ -1.07
SNCA-203ENST00000394986 MT1XP80297 61 aa8.37□□□□□ -1.07
SNCA-203ENST00000394986 SEC61GP60059 68 aa8.35□□□□□ -1.07
SNCA-203ENST00000394986 ATP5EP56381 51 aaPredicted RBP8.34□□□□□ -1.07
SNCA-203ENST00000394986 SERP1Q9Y6X1 66 aa8.33□□□□□ -1.08
SNCA-203ENST00000394986 PRO2289Q9P1D8 64 aa8.3□□□□□ -1.08
SNCA-203ENST00000394986 TMEM258P61165 79 aa8.27□□□□□ -1.09
SNCA-203ENST00000394986 A0A1B0GU33 70 aa8.2□□□□□ -1.1
SNCA-203ENST00000394986 KRTAP6-3Q3LI67 103 aa8.2□□□□□ -1.1
SNCA-203ENST00000394986 A0A1B0GU69 56 aa8.2□□□□□ -1.1
SNCA-203ENST00000394986 SPATA8Q6RVD6 105 aa8.2□□□□□ -1.1
SNCA-203ENST00000394986 A0A0D9SG42 100 aa8.16□□□□□ -1.1
SNCA-203ENST00000394986 KMT2DO14686 5537 aa8.05□□□□□ -1.12
SNCA-203ENST00000394986 KRTAP12-2P59991 146 aa8.04□□□□□ -1.12
SNCA-203ENST00000394986 LINC01558Q9Y6Z2 57 aa8.04□□□□□ -1.12
SNCA-203ENST00000394986 CAMK2N1Q7Z7J9 78 aa8.03□□□□□ -1.12
SNCA-203ENST00000394986 KRTAP10-7P60409 375 aaPredicted RBP8.02□□□□□ -1.13
SNCA-203ENST00000394986 PRR15LQ9BU68 103 aa8.01□□□□□ -1.13
SNCA-203ENST00000394986 SPINT4Q6UDR6 99 aa8□□□□□ -1.13
SNCA-203ENST00000394986 A8MU10 97 aa7.97□□□□□ -1.13
SNCA-203ENST00000394986 KRTAP12-1P59990 96 aa7.97□□□□□ -1.13
SNCA-203ENST00000394986 KRTAP5-9P26371 169 aa7.96□□□□□ -1.13
SNCA-203ENST00000394986 SMIM26A0A096LP01 95 aa7.95□□□□□ -1.14
SNCA-203ENST00000394986 KRTAP4-8A0A0G2JLE6 195 aa7.93□□□□□ -1.14
SNCA-203ENST00000394986 KRTAP4-8Q9BYQ9 185 aa7.93□□□□□ -1.14
SNCA-203ENST00000394986 KRTAP10-12P60413 245 aa7.92□□□□□ -1.14
SNCA-203ENST00000394986 MUC12Q9UKN1 5478 aa7.91□□□□□ -1.14
SNCA-203ENST00000394986 KRTAP8-1Q8IUC2 63 aa7.9□□□□□ -1.14
SNCA-203ENST00000394986 PCP4P48539 62 aa7.86□□□□□ -1.15
SNCA-203ENST00000394986 SPRR2FQ96RM1 72 aa7.85□□□□□ -1.15
SNCA-203ENST00000394986 NEBP20929 6669 aa7.83□□□□□ -1.16
SNCA-203ENST00000394986 UQCR11O14957 56 aa7.77□□□□□ -1.17
SNCA-203ENST00000394986 MDN1Q9NU22 5596 aa7.77□□□□□ -1.17
SNCA-203ENST00000394986 PSPHP1O15172 72 aa7.72□□□□□ -1.17
SNCA-203ENST00000394986 Q1T7F1 81 aa7.71□□□□□ -1.17
SNCA-203ENST00000394986 V9GYY9 64 aa7.71□□□□□ -1.17
SNCA-203ENST00000394986 SPRR2EP22531 72 aa7.65□□□□□ -1.18
SNCA-203ENST00000394986 SPRR2BP35325 72 aa7.65□□□□□ -1.18
SNCA-203ENST00000394986 SPRR2AP35326 72 aa7.65□□□□□ -1.18
SNCA-203ENST00000394986 MIR22HGQ0VDD5 57 aa7.64□□□□□ -1.19
SNCA-203ENST00000394986 C10orf95Q9H7T3 257 aa7.61□□□□□ -1.19
SNCA-203ENST00000394986 LCE1AQ5T7P2 110 aa7.59□□□□□ -1.19
SNCA-203ENST00000394986 RPS28P62857 69 aaKnown RBP7.57□□□□□ -1.2
SNCA-203ENST00000394986 KRTAP4-12Q9BQ66 201 aa7.52□□□□□ -1.21
SNCA-203ENST00000394986 LCE3BQ5TA77 95 aa7.51□□□□□ -1.21
SNCA-203ENST00000394986 KRTAP19-7Q3SYF9 63 aa7.48□□□□□ -1.21
SNCA-203ENST00000394986 TNP1P09430 55 aa7.46□□□□□ -1.21
SNCA-203ENST00000394986 KRTAP20-1Q3LI63 56 aa7.46□□□□□ -1.21
SNCA-203ENST00000394986 A6NED7 52 aa7.44□□□□□ -1.22
SNCA-203ENST00000394986 K7ERS5 55 aa7.39□□□□□ -1.23
SNCA-203ENST00000394986 MT1EP04732 61 aa7.39□□□□□ -1.23
SNCA-203ENST00000394986 SPRR2DP22532 72 aa7.38□□□□□ -1.23
SNCA-203ENST00000394986 KRTAP19-5Q3LI72 72 aa7.38□□□□□ -1.23
SNCA-203ENST00000394986 LCE3AQ5TA76 89 aa7.38□□□□□ -1.23
SNCA-203ENST00000394986 KRTAP9-9Q9BYP9 154 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 212.5 ms