RNA–Protein interactions for RNA: ENST00000394830.7

PBRM1-204, Transcript of polybromo 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PBRM1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-204ENST00000394830 KRTAP3-3Q9BYR6 98 aa6.86□□□□□ -1.31
PBRM1-204ENST00000394830 KRTAP13-4Q3LI77 160 aa6.86□□□□□ -1.31
PBRM1-204ENST00000394830 LUZP6Q538Z0 58 aa6.85□□□□□ -1.31
PBRM1-204ENST00000394830 DNAH7Q8WXX0 4024 aa6.84□□□□□ -1.31
PBRM1-204ENST00000394830 MT1HL1P0DM35 61 aa6.84□□□□□ -1.31
PBRM1-204ENST00000394830 HECTD4Q9Y4D8 3996 aa6.82□□□□□ -1.32
PBRM1-204ENST00000394830 M0R2T5 61 aa6.82□□□□□ -1.32
PBRM1-204ENST00000394830 KRTAP12-2P59991 146 aa6.82□□□□□ -1.32
PBRM1-204ENST00000394830 KRTAP3-2Q9BYR7 98 aa6.81□□□□□ -1.32
PBRM1-204ENST00000394830 DYNC1H1Q14204 4646 aaKnown RBP6.79□□□□□ -1.32
PBRM1-204ENST00000394830 KRTAP12-1P59990 96 aa6.78□□□□□ -1.32
PBRM1-204ENST00000394830 FRAS1Q86XX4 4008 aa6.76□□□□□ -1.33
PBRM1-204ENST00000394830 FAT1Q14517 4588 aa6.73□□□□□ -1.33
PBRM1-204ENST00000394830 SACSQ9NZJ4 4579 aa6.71□□□□□ -1.33
PBRM1-204ENST00000394830 NDUFAF8A1L188 74 aa6.71□□□□□ -1.34
PBRM1-204ENST00000394830 DNAH6Q9C0G6 4158 aa6.71□□□□□ -1.34
PBRM1-204ENST00000394830 KMT2CQ8NEZ4 4911 aaKnown RBP6.7□□□□□ -1.34
PBRM1-204ENST00000394830 VPS13BQ7Z7G8 4022 aa6.7□□□□□ -1.34
PBRM1-204ENST00000394830 KRTAP4-5Q9BYR2 181 aa6.69□□□□□ -1.34
PBRM1-204ENST00000394830 PLAC4Q8WY50 150 aa6.66□□□□□ -1.34
PBRM1-204ENST00000394830 KIAA1109Q2LD37 5005 aa6.64□□□□□ -1.35
PBRM1-204ENST00000394830 PP632Q6XCG6 107 aa6.64□□□□□ -1.35
PBRM1-204ENST00000394830 RYR2Q92736 4967 aa6.64□□□□□ -1.35
PBRM1-204ENST00000394830 FAT2Q9NYQ8 4349 aa6.63□□□□□ -1.35
PBRM1-204ENST00000394830 HYDINQ4G0P3 5121 aa6.62□□□□□ -1.35
PBRM1-204ENST00000394830 TNP1P09430 55 aa6.61□□□□□ -1.35
PBRM1-204ENST00000394830 RYR3Q15413 4870 aa6.59□□□□□ -1.35
PBRM1-204ENST00000394830 A0A0A0MQY5 61 aa6.5□□□□□ -1.37
PBRM1-204ENST00000394830 RYR1P21817 5038 aa6.46□□□□□ -1.38
PBRM1-204ENST00000394830 APOBP04114 4563 aaKnown RBP6.44□□□□□ -1.38
PBRM1-204ENST00000394830 PKD1P98161 4303 aa6.41□□□□□ -1.38
PBRM1-204ENST00000394830 PKHD1P08F94 4074 aa6.4□□□□□ -1.39
PBRM1-204ENST00000394830 KRTAP17-1Q9BYP8 105 aa6.38□□□□□ -1.39
PBRM1-204ENST00000394830 BIRC6Q9NR09 4857 aa6.37□□□□□ -1.39
PBRM1-204ENST00000394830 EPPK1P58107 5090 aaKnown RBP6.37□□□□□ -1.39
PBRM1-204ENST00000394830 LRP1Q07954 4544 aaKnown RBP6.34□□□□□ -1.4
PBRM1-204ENST00000394830 KRTAP15-1Q3LI76 137 aa6.33□□□□□ -1.4
PBRM1-204ENST00000394830 MYCBP2O75592 4640 aa6.33□□□□□ -1.4
PBRM1-204ENST00000394830 FAT3Q8TDW7 4589 aa6.31□□□□□ -1.4
PBRM1-204ENST00000394830 KRTAP10-10P60014 251 aa6.3□□□□□ -1.4
PBRM1-204ENST00000394830 HERC2O95714 4834 aa6.29□□□□□ -1.4
PBRM1-204ENST00000394830 LORP23490 312 aaPredicted RBP6.28□□□□□ -1.4
PBRM1-204ENST00000394830 KRTAP4-1Q9BYQ7 146 aa6.22□□□□□ -1.41
PBRM1-204ENST00000394830 HSPG2P98160 4391 aa6.2□□□□□ -1.42
PBRM1-204ENST00000394830 PKHD1L1Q86WI1 4243 aa6.19□□□□□ -1.42
PBRM1-204ENST00000394830 ABCA13Q86UQ4 5058 aa6.08□□□□□ -1.44
PBRM1-204ENST00000394830 KRTAP23-1A1A580 65 aa6.03□□□□□ -1.44
PBRM1-204ENST00000394830 LRP2P98164 4655 aa6.03□□□□□ -1.44
PBRM1-204ENST00000394830 TNXBP22105 4242 aa6.02□□□□□ -1.45
PBRM1-204ENST00000394830 PRO2289Q9P1D8 64 aa6.02□□□□□ -1.45
PBRM1-204ENST00000394830 PCLOQ9Y6V0 5065 aa5.91□□□□□ -1.46
PBRM1-204ENST00000394830 HERC1Q15751 4861 aa5.84□□□□□ -1.48
PBRM1-204ENST00000394830 SPRR2GQ9BYE4 73 aa5.83□□□□□ -1.48
PBRM1-204ENST00000394830 LCE3AQ5TA76 89 aa5.79□□□□□ -1.48
PBRM1-204ENST00000394830 LPAP08519 4548 aa5.78□□□□□ -1.48
PBRM1-204ENST00000394830 MT1HP80294 61 aa5.77□□□□□ -1.49
PBRM1-204ENST00000394830 KRTAP10-12P60413 245 aa5.75□□□□□ -1.49
PBRM1-204ENST00000394830 KRTAP19-2Q3LHN2 52 aa5.75□□□□□ -1.49
PBRM1-204ENST00000394830 MT2AP02795 61 aa5.72□□□□□ -1.49
PBRM1-204ENST00000394830 KRTAP12-3P60328 96 aa5.68□□□□□ -1.5
PBRM1-204ENST00000394830 MT1FP04733 61 aa5.66□□□□□ -1.5
PBRM1-204ENST00000394830 KRTAP19-1Q8IUB9 90 aa5.66□□□□□ -1.5
PBRM1-204ENST00000394830 LCE2CQ5TA81 110 aa5.6□□□□□ -1.51
PBRM1-204ENST00000394830 HMCN2Q8NDA2 5059 aa5.57□□□□□ -1.52
PBRM1-204ENST00000394830 UBR4Q5T4S7 5183 aa5.57□□□□□ -1.52
PBRM1-204ENST00000394830 MUC17Q685J3 4493 aa5.56□□□□□ -1.52
PBRM1-204ENST00000394830 RNF213Q63HN8 5207 aa5.55□□□□□ -1.52
PBRM1-204ENST00000394830 KRTAP19-8Q3LI54 63 aa5.53□□□□□ -1.52
PBRM1-204ENST00000394830 KRTAP8-1Q8IUC2 63 aa5.52□□□□□ -1.53
PBRM1-204ENST00000394830 FLGP20930 4061 aaPredicted RBP5.51□□□□□ -1.53
PBRM1-204ENST00000394830 INE1O15225 51 aa5.47□□□□□ -1.53
PBRM1-204ENST00000394830 KRTAP9-8Q9BYQ0 159 aa5.45□□□□□ -1.54
PBRM1-204ENST00000394830 SPRR5A0A1B0GTR4 108 aa5.42□□□□□ -1.54
PBRM1-204ENST00000394830 MUC2Q02817 5179 aa5.42□□□□□ -1.54
PBRM1-204ENST00000394830 MT1BP07438 61 aa5.39□□□□□ -1.55
PBRM1-204ENST00000394830 MT1XP80297 61 aa5.37□□□□□ -1.55
PBRM1-204ENST00000394830 KRTAP10-5P60370 271 aa5.35□□□□□ -1.55
PBRM1-204ENST00000394830 FAT4Q6V0I7 4981 aa5.32□□□□□ -1.56
PBRM1-204ENST00000394830 KRTAP10-7P60409 375 aaPredicted RBP5.29□□□□□ -1.56
PBRM1-204ENST00000394830 KRTAP9-3Q9BYQ3 159 aa5.26□□□□□ -1.57
PBRM1-204ENST00000394830 KRTAP19-5Q3LI72 72 aa5.24□□□□□ -1.57
PBRM1-204ENST00000394830 LCE3CQ5T5A8 94 aa5.17□□□□□ -1.58
PBRM1-204ENST00000394830 FSIP2Q5CZC0 6907 aa5.16□□□□□ -1.58
PBRM1-204ENST00000394830 LCE2AQ5TA79 106 aaPredicted RBP5.12□□□□□ -1.59
PBRM1-204ENST00000394830 KRTAP19-4Q3LI73 84 aa5.07□□□□□ -1.6
PBRM1-204ENST00000394830 LCE2BO14633 110 aa5.02□□□□□ -1.61
PBRM1-204ENST00000394830 KRTAP4-8A0A0G2JLE6 195 aa4.97□□□□□ -1.61
PBRM1-204ENST00000394830 KRTAP4-8Q9BYQ9 185 aa4.97□□□□□ -1.61
PBRM1-204ENST00000394830 CRCT1Q9UGL9 99 aa4.95□□□□□ -1.62
PBRM1-204ENST00000394830 KRTAP9-2Q9BYQ4 174 aa4.92□□□□□ -1.62
PBRM1-204ENST00000394830 LCE2DQ5TA82 110 aaPredicted RBP4.77□□□□□ -1.65
PBRM1-204ENST00000394830 MT1LQ93083 61 aa4.74□□□□□ -1.65
PBRM1-204ENST00000394830 MT1EP04732 61 aa4.73□□□□□ -1.65
PBRM1-204ENST00000394830 KRTAP4-7Q9BYR0 210 aa4.71□□□□□ -1.65
PBRM1-204ENST00000394830 KRTAP19-7Q3SYF9 63 aa4.7□□□□□ -1.66
PBRM1-204ENST00000394830 SPRR2FQ96RM1 72 aa4.68□□□□□ -1.66
PBRM1-204ENST00000394830 USH2AO75445 5202 aa4.67□□□□□ -1.66
PBRM1-204ENST00000394830 MT1GP13640 62 aa4.64□□□□□ -1.67
PBRM1-204ENST00000394830 KRTAP9-6A0A140TA67 174 aa4.64□□□□□ -1.67
PBRM1-204ENST00000394830 KRTAP19-6Q3LI70 58 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms