RNA–Protein interactions for RNA: ENST00000394752.7

SFMBT1-201, Transcript of Scm like with four mbt domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFMBT1, Length 4,548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-201ENST00000394752 C10orf95Q9H7T3 257 aa7.54□□□□□ -1.2
SFMBT1-201ENST00000394752 FRAS1Q86XX4 4008 aa7.53□□□□□ -1.2
SFMBT1-201ENST00000394752 KRTAP3-1Q9BYR8 98 aa7.51□□□□□ -1.21
SFMBT1-201ENST00000394752 DNAH6Q9C0G6 4158 aa7.5□□□□□ -1.21
SFMBT1-201ENST00000394752 DYNC1H1Q14204 4646 aaKnown RBP7.49□□□□□ -1.21
SFMBT1-201ENST00000394752 TPRXLQ17RH7 258 aa7.47□□□□□ -1.21
SFMBT1-201ENST00000394752 HYDINQ4G0P3 5121 aa7.44□□□□□ -1.22
SFMBT1-201ENST00000394752 FAT1Q14517 4588 aa7.41□□□□□ -1.22
SFMBT1-201ENST00000394752 VPS13BQ7Z7G8 4022 aa7.41□□□□□ -1.22
SFMBT1-201ENST00000394752 MT1HL1P0DM35 61 aa7.35□□□□□ -1.23
SFMBT1-201ENST00000394752 NDUFAF8A1L188 74 aa7.34□□□□□ -1.23
SFMBT1-201ENST00000394752 FAT2Q9NYQ8 4349 aa7.33□□□□□ -1.24
SFMBT1-201ENST00000394752 SACSQ9NZJ4 4579 aa7.32□□□□□ -1.24
SFMBT1-201ENST00000394752 PLAC4Q8WY50 150 aa7.25□□□□□ -1.25
SFMBT1-201ENST00000394752 PKHD1P08F94 4074 aa7.23□□□□□ -1.25
SFMBT1-201ENST00000394752 KRTAP13-4Q3LI77 160 aa7.23□□□□□ -1.25
SFMBT1-201ENST00000394752 PKD1P98161 4303 aa7.23□□□□□ -1.25
SFMBT1-201ENST00000394752 KRTAP12-2P59991 146 aa7.22□□□□□ -1.25
SFMBT1-201ENST00000394752 RYR2Q92736 4967 aa7.21□□□□□ -1.26
SFMBT1-201ENST00000394752 KRTAP10-6P60371 365 aaPredicted RBP7.2□□□□□ -1.26
SFMBT1-201ENST00000394752 APOBP04114 4563 aaKnown RBP7.18□□□□□ -1.26
SFMBT1-201ENST00000394752 KRTAP4-5Q9BYR2 181 aa7.17□□□□□ -1.26
SFMBT1-201ENST00000394752 KRTAP12-1P59990 96 aa7.11□□□□□ -1.27
SFMBT1-201ENST00000394752 TNP1P09430 55 aa7.1□□□□□ -1.27
SFMBT1-201ENST00000394752 A0A0A0MQY5 61 aa7.08□□□□□ -1.28
SFMBT1-201ENST00000394752 KRTAP3-3Q9BYR6 98 aa7.08□□□□□ -1.28
SFMBT1-201ENST00000394752 KIAA1109Q2LD37 5005 aa7.05□□□□□ -1.28
SFMBT1-201ENST00000394752 KMT2CQ8NEZ4 4911 aaKnown RBP7.02□□□□□ -1.29
SFMBT1-201ENST00000394752 LRP1Q07954 4544 aaKnown RBP7.02□□□□□ -1.29
SFMBT1-201ENST00000394752 KRTAP3-2Q9BYR7 98 aa7.02□□□□□ -1.29
SFMBT1-201ENST00000394752 RYR1P21817 5038 aa7.02□□□□□ -1.29
SFMBT1-201ENST00000394752 RYR3Q15413 4870 aa7.02□□□□□ -1.29
SFMBT1-201ENST00000394752 MYCBP2O75592 4640 aa7□□□□□ -1.29
SFMBT1-201ENST00000394752 KRTAP17-1Q9BYP8 105 aa6.99□□□□□ -1.29
SFMBT1-201ENST00000394752 KRTAP10-10P60014 251 aa6.92□□□□□ -1.3
SFMBT1-201ENST00000394752 HSPG2P98160 4391 aa6.91□□□□□ -1.3
SFMBT1-201ENST00000394752 PP632Q6XCG6 107 aa6.91□□□□□ -1.3
SFMBT1-201ENST00000394752 FAT3Q8TDW7 4589 aa6.89□□□□□ -1.31
SFMBT1-201ENST00000394752 PKHD1L1Q86WI1 4243 aa6.82□□□□□ -1.32
SFMBT1-201ENST00000394752 TNXBP22105 4242 aa6.72□□□□□ -1.33
SFMBT1-201ENST00000394752 LORP23490 312 aaPredicted RBP6.69□□□□□ -1.34
SFMBT1-201ENST00000394752 KRTAP4-1Q9BYQ7 146 aa6.69□□□□□ -1.34
SFMBT1-201ENST00000394752 EPPK1P58107 5090 aaKnown RBP6.64□□□□□ -1.35
SFMBT1-201ENST00000394752 LRP2P98164 4655 aa6.6□□□□□ -1.35
SFMBT1-201ENST00000394752 HERC2O95714 4834 aa6.58□□□□□ -1.36
SFMBT1-201ENST00000394752 KRTAP15-1Q3LI76 137 aa6.52□□□□□ -1.37
SFMBT1-201ENST00000394752 LPAP08519 4548 aa6.5□□□□□ -1.37
SFMBT1-201ENST00000394752 BIRC6Q9NR09 4857 aa6.46□□□□□ -1.38
SFMBT1-201ENST00000394752 PRO2289Q9P1D8 64 aa6.44□□□□□ -1.38
SFMBT1-201ENST00000394752 ABCA13Q86UQ4 5058 aa6.44□□□□□ -1.38
SFMBT1-201ENST00000394752 MT1HP80294 61 aa6.23□□□□□ -1.41
SFMBT1-201ENST00000394752 HERC1Q15751 4861 aa6.19□□□□□ -1.42
SFMBT1-201ENST00000394752 LCE3AQ5TA76 89 aa6.17□□□□□ -1.42
SFMBT1-201ENST00000394752 KRTAP19-2Q3LHN2 52 aa6.15□□□□□ -1.43
SFMBT1-201ENST00000394752 KRTAP10-12P60413 245 aa6.14□□□□□ -1.43
SFMBT1-201ENST00000394752 MT2AP02795 61 aa6.11□□□□□ -1.43
SFMBT1-201ENST00000394752 SPRR2GQ9BYE4 73 aa6.1□□□□□ -1.43
SFMBT1-201ENST00000394752 PCLOQ9Y6V0 5065 aa6.07□□□□□ -1.44
SFMBT1-201ENST00000394752 MT1FP04733 61 aa6.07□□□□□ -1.44
SFMBT1-201ENST00000394752 LCE2CQ5TA81 110 aa6.06□□□□□ -1.44
SFMBT1-201ENST00000394752 KRTAP12-3P60328 96 aa6.05□□□□□ -1.44
SFMBT1-201ENST00000394752 MUC17Q685J3 4493 aa6.03□□□□□ -1.44
SFMBT1-201ENST00000394752 KRTAP23-1A1A580 65 aa6.01□□□□□ -1.45
SFMBT1-201ENST00000394752 FLGP20930 4061 aaPredicted RBP6.01□□□□□ -1.45
SFMBT1-201ENST00000394752 KRTAP19-1Q8IUB9 90 aa5.97□□□□□ -1.45
SFMBT1-201ENST00000394752 MUC2Q02817 5179 aa5.96□□□□□ -1.45
SFMBT1-201ENST00000394752 HMCN2Q8NDA2 5059 aa5.96□□□□□ -1.46
SFMBT1-201ENST00000394752 RNF213Q63HN8 5207 aa5.87□□□□□ -1.47
SFMBT1-201ENST00000394752 KRTAP9-8Q9BYQ0 159 aa5.87□□□□□ -1.47
SFMBT1-201ENST00000394752 KRTAP19-8Q3LI54 63 aa5.8□□□□□ -1.48
SFMBT1-201ENST00000394752 UBR4Q5T4S7 5183 aa5.79□□□□□ -1.48
SFMBT1-201ENST00000394752 CRCT1Q9UGL9 99 aa5.77□□□□□ -1.49
SFMBT1-201ENST00000394752 FAT4Q6V0I7 4981 aa5.76□□□□□ -1.49
SFMBT1-201ENST00000394752 MT1BP07438 61 aa5.71□□□□□ -1.5
SFMBT1-201ENST00000394752 MT1XP80297 61 aa5.66□□□□□ -1.5
SFMBT1-201ENST00000394752 KRTAP9-3Q9BYQ3 159 aa5.66□□□□□ -1.5
SFMBT1-201ENST00000394752 KRTAP10-5P60370 271 aa5.64□□□□□ -1.51
SFMBT1-201ENST00000394752 KRTAP8-1Q8IUC2 63 aa5.64□□□□□ -1.51
SFMBT1-201ENST00000394752 INE1O15225 51 aa5.63□□□□□ -1.51
SFMBT1-201ENST00000394752 KRTAP10-7P60409 375 aaPredicted RBP5.61□□□□□ -1.51
SFMBT1-201ENST00000394752 KRTAP19-5Q3LI72 72 aa5.57□□□□□ -1.52
SFMBT1-201ENST00000394752 FSIP2Q5CZC0 6907 aa5.51□□□□□ -1.53
SFMBT1-201ENST00000394752 LCE2BO14633 110 aa5.46□□□□□ -1.54
SFMBT1-201ENST00000394752 KRTAP4-8A0A0G2JLE6 195 aa5.4□□□□□ -1.54
SFMBT1-201ENST00000394752 KRTAP4-8Q9BYQ9 185 aa5.4□□□□□ -1.54
SFMBT1-201ENST00000394752 LCE3CQ5T5A8 94 aa5.4□□□□□ -1.54
SFMBT1-201ENST00000394752 SPRR5A0A1B0GTR4 108 aa5.36□□□□□ -1.55
SFMBT1-201ENST00000394752 LCE2AQ5TA79 106 aaPredicted RBP5.35□□□□□ -1.55
SFMBT1-201ENST00000394752 SPRR2FQ96RM1 72 aa5.19□□□□□ -1.58
SFMBT1-201ENST00000394752 SYNE1Q8NF91 8797 aaKnown RBP5.18□□□□□ -1.58
SFMBT1-201ENST00000394752 KRTAP4-7Q9BYR0 210 aa5.16□□□□□ -1.58
SFMBT1-201ENST00000394752 OBSCNQ5VST9 7968 aa5.12□□□□□ -1.59
SFMBT1-201ENST00000394752 KRTAP19-4Q3LI73 84 aa5.08□□□□□ -1.6
SFMBT1-201ENST00000394752 USH2AO75445 5202 aa5.05□□□□□ -1.6
SFMBT1-201ENST00000394752 MT1GP13640 62 aa5.03□□□□□ -1.6
SFMBT1-201ENST00000394752 KRTAP19-6Q3LI70 58 aa5.02□□□□□ -1.61
SFMBT1-201ENST00000394752 MT1EP04732 61 aa4.98□□□□□ -1.61
SFMBT1-201ENST00000394752 MT1LQ93083 61 aa4.96□□□□□ -1.61
SFMBT1-201ENST00000394752 KRTAP19-7Q3SYF9 63 aa4.95□□□□□ -1.62
SFMBT1-201ENST00000394752 KMT2DO14686 5537 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms