RNA–Protein interactions for RNA: ENST00000393585.6

CASP3-202, Transcript of caspase 3, humanhuman

TSL 1 (best) BASIC

Gene CASP3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-202ENST00000393585 LCA10Q71F78 164 aa5.87□□□□□ -1.47
CASP3-202ENST00000393585 A6NED7 52 aa5.87□□□□□ -1.47
CASP3-202ENST00000393585 SEC61BP60468 96 aaKnown RBP5.85□□□□□ -1.47
CASP3-202ENST00000393585 ABCA13Q86UQ4 5058 aa5.84□□□□□ -1.47
CASP3-202ENST00000393585 SPINK7P58062 85 aa5.84□□□□□ -1.47
CASP3-202ENST00000393585 ATP11AUNQ6ZP68 121 aa5.8□□□□□ -1.48
CASP3-202ENST00000393585 RPL37P61927 97 aaKnown RBP5.79□□□□□ -1.48
CASP3-202ENST00000393585 KRTAP4-8Q9BYQ9 185 aa5.79□□□□□ -1.48
CASP3-202ENST00000393585 LINC01558Q9Y6Z2 57 aa5.79□□□□□ -1.48
CASP3-202ENST00000393585 HERC2O95714 4834 aa5.78□□□□□ -1.48
CASP3-202ENST00000393585 LPAP08519 4548 aa5.77□□□□□ -1.49
CASP3-202ENST00000393585 BIRC6Q9NR09 4857 aa5.77□□□□□ -1.49
CASP3-202ENST00000393585 LRP2P98164 4655 aa5.76□□□□□ -1.49
CASP3-202ENST00000393585 KRTAP3-1Q9BYR8 98 aa5.76□□□□□ -1.49
CASP3-202ENST00000393585 KTN1-AS1Q86SY8 53 aa5.75□□□□□ -1.49
CASP3-202ENST00000393585 KRTAP9-2Q9BYQ4 174 aa5.73□□□□□ -1.49
CASP3-202ENST00000393585 CDC42SE1Q9NRR8 79 aa5.73□□□□□ -1.49
CASP3-202ENST00000393585 A6NN06 94 aa5.73□□□□□ -1.49
CASP3-202ENST00000393585 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.73□□□□□ -1.49
CASP3-202ENST00000393585 RBM12B-AS1Q9P1G2 102 aa5.73□□□□□ -1.49
CASP3-202ENST00000393585 TPRXLQ17RH7 258 aa5.7□□□□□ -1.5
CASP3-202ENST00000393585 KRTAP9-6A0A140TA67 174 aa5.69□□□□□ -1.5
CASP3-202ENST00000393585 COX6B2Q6YFQ2 88 aa5.69□□□□□ -1.5
CASP3-202ENST00000393585 KRTAP19-1Q8IUB9 90 aa5.67□□□□□ -1.5
CASP3-202ENST00000393585 A0A1B0GU69 56 aa5.66□□□□□ -1.5
CASP3-202ENST00000393585 KRTAP4-12Q9BQ66 201 aa5.65□□□□□ -1.51
CASP3-202ENST00000393585 PRAC1Q96KF2 57 aa5.62□□□□□ -1.51
CASP3-202ENST00000393585 KRTAP23-1A1A580 65 aa5.61□□□□□ -1.51
CASP3-202ENST00000393585 ADM2Q7Z4H4 148 aa5.61□□□□□ -1.51
CASP3-202ENST00000393585 LCE3BQ5TA77 95 aa5.58□□□□□ -1.52
CASP3-202ENST00000393585 PCLOQ9Y6V0 5065 aa5.56□□□□□ -1.52
CASP3-202ENST00000393585 HERC1Q15751 4861 aa5.53□□□□□ -1.52
CASP3-202ENST00000393585 S4R3F8 94 aa5.52□□□□□ -1.53
CASP3-202ENST00000393585 UQCR11O14957 56 aa5.51□□□□□ -1.53
CASP3-202ENST00000393585 MUC17Q685J3 4493 aa5.49□□□□□ -1.53
CASP3-202ENST00000393585 H1FX-AS1Q4G0G2 97 aa5.49□□□□□ -1.53
CASP3-202ENST00000393585 MIR22HGQ0VDD5 57 aa5.48□□□□□ -1.53
CASP3-202ENST00000393585 SPATA8Q6RVD6 105 aa5.47□□□□□ -1.53
CASP3-202ENST00000393585 KRTAP4-1Q9BYQ7 146 aa5.46□□□□□ -1.54
CASP3-202ENST00000393585 KRTAP9-9Q9BYP9 154 aa5.45□□□□□ -1.54
CASP3-202ENST00000393585 KRTAP9-4Q9BYQ2 154 aa5.45□□□□□ -1.54
CASP3-202ENST00000393585 A0A1B0GU33 70 aa5.43□□□□□ -1.54
CASP3-202ENST00000393585 HMCN2Q8NDA2 5059 aa5.43□□□□□ -1.54
CASP3-202ENST00000393585 LCE4AQ5TA78 99 aa5.43□□□□□ -1.54
CASP3-202ENST00000393585 MUC2Q02817 5179 aa5.42□□□□□ -1.54
CASP3-202ENST00000393585 H0YAA0 97 aa5.41□□□□□ -1.54
CASP3-202ENST00000393585 KRTAP10-6P60371 365 aaPredicted RBP5.4□□□□□ -1.55
CASP3-202ENST00000393585 CSAG1Q6PB30 78 aa5.39□□□□□ -1.55
CASP3-202ENST00000393585 LINC01554Q52M75 96 aa5.38□□□□□ -1.55
CASP3-202ENST00000393585 P0C880 135 aa5.35□□□□□ -1.55
CASP3-202ENST00000393585 KRTAP19-4Q3LI73 84 aa5.33□□□□□ -1.56
CASP3-202ENST00000393585 KRTAP13-4Q3LI77 160 aa5.31□□□□□ -1.56
CASP3-202ENST00000393585 KRTAP19-2Q3LHN2 52 aa5.3□□□□□ -1.56
CASP3-202ENST00000393585 KRTAP9-7A8MTY7 169 aa5.28□□□□□ -1.56
CASP3-202ENST00000393585 KRTAP4-8A0A0G2JLE6 195 aa5.27□□□□□ -1.57
CASP3-202ENST00000393585 A0A0D9SG42 100 aa5.25□□□□□ -1.57
CASP3-202ENST00000393585 CRIPTQ9P021 101 aa5.24□□□□□ -1.57
CASP3-202ENST00000393585 FLGP20930 4061 aaPredicted RBP5.22□□□□□ -1.57
CASP3-202ENST00000393585 UBR4Q5T4S7 5183 aa5.21□□□□□ -1.58
CASP3-202ENST00000393585 RNF213Q63HN8 5207 aa5.19□□□□□ -1.58
CASP3-202ENST00000393585 FAT4Q6V0I7 4981 aa5.18□□□□□ -1.58
CASP3-202ENST00000393585 LCE1DQ5T752 114 aa5.18□□□□□ -1.58
CASP3-202ENST00000393585 K7ERS5 55 aa5.15□□□□□ -1.58
CASP3-202ENST00000393585 KRTAP25-1Q3LHN0 102 aa5.14□□□□□ -1.59
CASP3-202ENST00000393585 M0QZ58 72 aa5.13□□□□□ -1.59
CASP3-202ENST00000393585 R4GN34 69 aa5.11□□□□□ -1.59
CASP3-202ENST00000393585 KRTAP12-2P59991 146 aa5.1□□□□□ -1.59
CASP3-202ENST00000393585 SPINT4Q6UDR6 99 aa5.09□□□□□ -1.59
CASP3-202ENST00000393585 KRTAP12-1P59990 96 aa5.08□□□□□ -1.6
CASP3-202ENST00000393585 ROMO1P60602 79 aa5.07□□□□□ -1.6
CASP3-202ENST00000393585 KRTAP4-7Q9BYR0 210 aa5.06□□□□□ -1.6
CASP3-202ENST00000393585 KRTAP9-3Q9BYQ3 159 aa5.04□□□□□ -1.6
CASP3-202ENST00000393585 MT1HP80294 61 aa4.99□□□□□ -1.61
CASP3-202ENST00000393585 M0R2T5 61 aa4.99□□□□□ -1.61
CASP3-202ENST00000393585 KRTAP4-9Q9BYQ8 210 aa4.99□□□□□ -1.61
CASP3-202ENST00000393585 C10orf95Q9H7T3 257 aa4.96□□□□□ -1.61
CASP3-202ENST00000393585 LCE5AQ5TCM9 118 aa4.96□□□□□ -1.62
CASP3-202ENST00000393585 LUZP6Q538Z0 58 aa4.91□□□□□ -1.62
CASP3-202ENST00000393585 KRTAP4-11Q9BYQ6 195 aa4.87□□□□□ -1.63
CASP3-202ENST00000393585 KRTAP4-2Q9BYR5 136 aa4.86□□□□□ -1.63
CASP3-202ENST00000393585 MT2AP02795 61 aa4.84□□□□□ -1.63
CASP3-202ENST00000393585 MT1FP04733 61 aa4.84□□□□□ -1.63
CASP3-202ENST00000393585 KRTAP9-8Q9BYQ0 159 aa4.83□□□□□ -1.64
CASP3-202ENST00000393585 KRTAP10-10P60014 251 aa4.82□□□□□ -1.64
CASP3-202ENST00000393585 CAMK2N1Q7Z7J9 78 aa4.81□□□□□ -1.64
CASP3-202ENST00000393585 SPRR2GQ9BYE4 73 aa4.8□□□□□ -1.64
CASP3-202ENST00000393585 NDUFAF8A1L188 74 aa4.77□□□□□ -1.65
CASP3-202ENST00000393585 KRTAP15-1Q3LI76 137 aa4.73□□□□□ -1.65
CASP3-202ENST00000393585 PLAC4Q8WY50 150 aa4.7□□□□□ -1.66
CASP3-202ENST00000393585 KRTAP19-8Q3LI54 63 aa4.63□□□□□ -1.67
CASP3-202ENST00000393585 MT1BP07438 61 aa4.61□□□□□ -1.67
CASP3-202ENST00000393585 TNP1P09430 55 aa4.58□□□□□ -1.68
CASP3-202ENST00000393585 USH2AO75445 5202 aa4.51□□□□□ -1.69
CASP3-202ENST00000393585 MT1XP80297 61 aa4.5□□□□□ -1.69
CASP3-202ENST00000393585 PP632Q6XCG6 107 aa4.5□□□□□ -1.69
CASP3-202ENST00000393585 KRTAP10-5P60370 271 aa4.5□□□□□ -1.69
CASP3-202ENST00000393585 LCE3AQ5TA76 89 aa4.41□□□□□ -1.7
CASP3-202ENST00000393585 KRTAP10-7P60409 375 aaPredicted RBP4.37□□□□□ -1.71
CASP3-202ENST00000393585 KRTAP5-3Q6L8H2 238 aa4.37□□□□□ -1.71
CASP3-202ENST00000393585 PRO2289Q9P1D8 64 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms