RNA–Protein interactions for RNA: ENST00000390488.1

TRAJ49-201, Transcript of T cell receptor alpha joining 49, humanhuman

APPRIS P1 BASIC

Gene TRAJ49, Length 56 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ49-201ENST00000390488 DNAH10Q8IVF4 4471 aa0.98□□□□□ -2.25
TRAJ49-201ENST00000390488 FBN1P35555 2871 aaKnown RBP0.98□□□□□ -2.25
TRAJ49-201ENST00000390488 TNP1P09430 55 aa0.98□□□□□ -2.25
TRAJ49-201ENST00000390488 PLAC4Q8WY50 150 aa0.98□□□□□ -2.25
TRAJ49-201ENST00000390488 KRTAP9-9Q9BYP9 154 aa0.98□□□□□ -2.25
TRAJ49-201ENST00000390488 KRTAP9-4Q9BYQ2 154 aa0.98□□□□□ -2.25
TRAJ49-201ENST00000390488 ALMS1Q8TCU4 4167 aa0.98□□□□□ -2.25
TRAJ49-201ENST00000390488 FBN3Q75N90 2809 aa0.97□□□□□ -2.25
TRAJ49-201ENST00000390488 A0A0D9SG42 100 aa0.97□□□□□ -2.25
TRAJ49-201ENST00000390488 NDUFAF8A1L188 74 aa0.97□□□□□ -2.25
TRAJ49-201ENST00000390488 KRTAP12-2P59991 146 aa0.97□□□□□ -2.25
TRAJ49-201ENST00000390488 Q5VSD8 79 aa0.97□□□□□ -2.25
TRAJ49-201ENST00000390488 DNAH17Q9UFH2 4485 aa0.97□□□□□ -2.25
TRAJ49-201ENST00000390488 FRAS1Q86XX4 4008 aa0.97□□□□□ -2.25
TRAJ49-201ENST00000390488 DNAH8Q96JB1 4490 aa0.96□□□□□ -2.26
TRAJ49-201ENST00000390488 DNAH7Q8WXX0 4024 aa0.96□□□□□ -2.26
TRAJ49-201ENST00000390488 KRTAP4-2Q9BYR5 136 aa0.96□□□□□ -2.26
TRAJ49-201ENST00000390488 DNAH11Q96DT5 4516 aa0.96□□□□□ -2.26
TRAJ49-201ENST00000390488 DNAH2Q9P225 4427 aa0.95□□□□□ -2.26
TRAJ49-201ENST00000390488 LYSTQ99698 3801 aa0.95□□□□□ -2.26
TRAJ49-201ENST00000390488 SACSQ9NZJ4 4579 aa0.95□□□□□ -2.26
TRAJ49-201ENST00000390488 CSMD3Q7Z407 3707 aa0.95□□□□□ -2.26
TRAJ49-201ENST00000390488 COL7A1Q02388 2944 aa0.95□□□□□ -2.26
TRAJ49-201ENST00000390488 KRTAP19-4Q3LI73 84 aa0.95□□□□□ -2.26
TRAJ49-201ENST00000390488 PKHD1L1Q86WI1 4243 aa0.95□□□□□ -2.26
TRAJ49-201ENST00000390488 PLECQ15149 4684 aaKnown RBP0.95□□□□□ -2.26
TRAJ49-201ENST00000390488 HECTD4Q9Y4D8 3996 aa0.95□□□□□ -2.26
TRAJ49-201ENST00000390488 CMYA5Q8N3K9 4069 aa0.94□□□□□ -2.26
TRAJ49-201ENST00000390488 STARD9Q9P2P6 4700 aa0.94□□□□□ -2.26
TRAJ49-201ENST00000390488 VPS13BQ7Z7G8 4022 aa0.94□□□□□ -2.26
TRAJ49-201ENST00000390488 INE1O15225 51 aa0.94□□□□□ -2.26
TRAJ49-201ENST00000390488 KMT2AQ03164 3969 aa0.93□□□□□ -2.26
TRAJ49-201ENST00000390488 SPRR5A0A1B0GTR4 108 aa0.93□□□□□ -2.26
TRAJ49-201ENST00000390488 SMR3BP02814 79 aaPredicted RBP0.93□□□□□ -2.26
TRAJ49-201ENST00000390488 LRP1BQ9NZR2 4599 aa0.92□□□□□ -2.26
TRAJ49-201ENST00000390488 DNAH5Q8TE73 4624 aa0.92□□□□□ -2.26
TRAJ49-201ENST00000390488 MT1HL1P0DM35 61 aa0.92□□□□□ -2.26
TRAJ49-201ENST00000390488 C10orf95Q9H7T3 257 aa0.92□□□□□ -2.26
TRAJ49-201ENST00000390488 FAT2Q9NYQ8 4349 aa0.92□□□□□ -2.26
TRAJ49-201ENST00000390488 PKHD1P08F94 4074 aa0.91□□□□□ -2.26
TRAJ49-201ENST00000390488 LCE1DQ5T752 114 aa0.91□□□□□ -2.26
TRAJ49-201ENST00000390488 KRTAP4-9Q9BYQ8 210 aa0.91□□□□□ -2.26
TRAJ49-201ENST00000390488 PRO2289Q9P1D8 64 aa0.91□□□□□ -2.26
TRAJ49-201ENST00000390488 KRTAP4-5Q9BYR2 181 aa0.9□□□□□ -2.27
TRAJ49-201ENST00000390488 APOBP04114 4563 aaKnown RBP0.89□□□□□ -2.27
TRAJ49-201ENST00000390488 SPRR2GQ9BYE4 73 aa0.89□□□□□ -2.27
TRAJ49-201ENST00000390488 TNXBP22105 4242 aa0.88□□□□□ -2.27
TRAJ49-201ENST00000390488 J3QL48 77 aa0.88□□□□□ -2.27
TRAJ49-201ENST00000390488 KRTAP8-1Q8IUC2 63 aa0.87□□□□□ -2.27
TRAJ49-201ENST00000390488 KRTAP4-12Q9BQ66 201 aa0.87□□□□□ -2.27
TRAJ49-201ENST00000390488 PKD1P98161 4303 aa0.87□□□□□ -2.27
TRAJ49-201ENST00000390488 DYNC1H1Q14204 4646 aaKnown RBP0.86□□□□□ -2.27
TRAJ49-201ENST00000390488 DNHD1Q96M86 4753 aa0.86□□□□□ -2.27
TRAJ49-201ENST00000390488 LRP1Q07954 4544 aaKnown RBP0.85□□□□□ -2.27
TRAJ49-201ENST00000390488 FAT1Q14517 4588 aa0.85□□□□□ -2.27
TRAJ49-201ENST00000390488 KRTAP19-2Q3LHN2 52 aa0.84□□□□□ -2.27
TRAJ49-201ENST00000390488 KRTAP4-11Q9BYQ6 195 aa0.84□□□□□ -2.27
TRAJ49-201ENST00000390488 FAT3Q8TDW7 4589 aa0.84□□□□□ -2.28
TRAJ49-201ENST00000390488 KRTAP19-8Q3LI54 63 aa0.83□□□□□ -2.28
TRAJ49-201ENST00000390488 HSPG2P98160 4391 aa0.82□□□□□ -2.28
TRAJ49-201ENST00000390488 KRTAP10-12P60413 245 aa0.82□□□□□ -2.28
TRAJ49-201ENST00000390488 MYCBP2O75592 4640 aa0.81□□□□□ -2.28
TRAJ49-201ENST00000390488 LCE2BO14633 110 aa0.81□□□□□ -2.28
TRAJ49-201ENST00000390488 KRTAP12-3P60328 96 aa0.81□□□□□ -2.28
TRAJ49-201ENST00000390488 RYR2Q92736 4967 aa0.81□□□□□ -2.28
TRAJ49-201ENST00000390488 M0R2T5 61 aa0.8□□□□□ -2.28
TRAJ49-201ENST00000390488 KRTAP19-1Q8IUB9 90 aa0.8□□□□□ -2.28
TRAJ49-201ENST00000390488 LORP23490 312 aaPredicted RBP0.79□□□□□ -2.28
TRAJ49-201ENST00000390488 LCE3AQ5TA76 89 aa0.79□□□□□ -2.28
TRAJ49-201ENST00000390488 RYR1P21817 5038 aa0.79□□□□□ -2.28
TRAJ49-201ENST00000390488 FLGP20930 4061 aaPredicted RBP0.79□□□□□ -2.28
TRAJ49-201ENST00000390488 LRP2P98164 4655 aa0.78□□□□□ -2.29
TRAJ49-201ENST00000390488 MUC17Q685J3 4493 aa0.77□□□□□ -2.29
TRAJ49-201ENST00000390488 HYDINQ4G0P3 5121 aa0.77□□□□□ -2.29
TRAJ49-201ENST00000390488 KRTAP10-10P60014 251 aa0.77□□□□□ -2.29
TRAJ49-201ENST00000390488 MT1HP80294 61 aa0.77□□□□□ -2.29
TRAJ49-201ENST00000390488 KRTAP4-1Q9BYQ7 146 aa0.77□□□□□ -2.29
TRAJ49-201ENST00000390488 MT2AP02795 61 aa0.76□□□□□ -2.29
TRAJ49-201ENST00000390488 KRTAP10-5P60370 271 aa0.76□□□□□ -2.29
TRAJ49-201ENST00000390488 LCE2AQ5TA79 106 aaPredicted RBP0.76□□□□□ -2.29
TRAJ49-201ENST00000390488 LCE2CQ5TA81 110 aa0.76□□□□□ -2.29
TRAJ49-201ENST00000390488 RYR3Q15413 4870 aa0.76□□□□□ -2.29
TRAJ49-201ENST00000390488 KMT2CQ8NEZ4 4911 aaKnown RBP0.75□□□□□ -2.29
TRAJ49-201ENST00000390488 MT1XP80297 61 aa0.75□□□□□ -2.29
TRAJ49-201ENST00000390488 LCE3CQ5T5A8 94 aa0.75□□□□□ -2.29
TRAJ49-201ENST00000390488 MT1FP04733 61 aa0.74□□□□□ -2.29
TRAJ49-201ENST00000390488 MT1BP07438 61 aa0.74□□□□□ -2.29
TRAJ49-201ENST00000390488 KIAA1109Q2LD37 5005 aa0.74□□□□□ -2.29
TRAJ49-201ENST00000390488 KRTAP2-3P0C7H8 128 aa0.73□□□□□ -2.29
TRAJ49-201ENST00000390488 KRTAP2-4Q9BYR9 128 aa0.73□□□□□ -2.29
TRAJ49-201ENST00000390488 KRTAP2-1Q9BYU5 128 aa0.73□□□□□ -2.29
TRAJ49-201ENST00000390488 LPAP08519 4548 aa0.73□□□□□ -2.29
TRAJ49-201ENST00000390488 BIRC6Q9NR09 4857 aa0.72□□□□□ -2.29
TRAJ49-201ENST00000390488 KRTAP9-3Q9BYQ3 159 aa0.72□□□□□ -2.29
TRAJ49-201ENST00000390488 HERC1Q15751 4861 aa0.72□□□□□ -2.29
TRAJ49-201ENST00000390488 MT1EP04732 61 aa0.71□□□□□ -2.3
TRAJ49-201ENST00000390488 KRTAP10-7P60409 375 aaPredicted RBP0.71□□□□□ -2.3
TRAJ49-201ENST00000390488 MT1LQ93083 61 aa0.71□□□□□ -2.3
TRAJ49-201ENST00000390488 HERC2O95714 4834 aa0.7□□□□□ -2.3
TRAJ49-201ENST00000390488 KRTAP19-5Q3LI72 72 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms