RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 COX6B2Q6YFQ2 88 aa9.48□□□□□ -0.89
ACTN4-202ENST00000390009 A0A1B0GU69 56 aa9.46□□□□□ -0.9
ACTN4-202ENST00000390009 ABCA13Q86UQ4 5058 aa9.44□□□□□ -0.9
ACTN4-202ENST00000390009 SPATA8Q6RVD6 105 aa9.38□□□□□ -0.91
ACTN4-202ENST00000390009 LRP2P98164 4655 aa9.37□□□□□ -0.91
ACTN4-202ENST00000390009 PRAC1Q96KF2 57 aa9.37□□□□□ -0.91
ACTN4-202ENST00000390009 BIRC6Q9NR09 4857 aa9.37□□□□□ -0.91
ACTN4-202ENST00000390009 HERC2O95714 4834 aa9.35□□□□□ -0.91
ACTN4-202ENST00000390009 LPAP08519 4548 aa9.35□□□□□ -0.91
ACTN4-202ENST00000390009 J3QL48 77 aa9.35□□□□□ -0.91
ACTN4-202ENST00000390009 ADM2Q7Z4H4 148 aa9.34□□□□□ -0.91
ACTN4-202ENST00000390009 UQCR11O14957 56 aa9.32□□□□□ -0.92
ACTN4-202ENST00000390009 MIR22HGQ0VDD5 57 aa9.32□□□□□ -0.92
ACTN4-202ENST00000390009 KRTAP3-3Q9BYR6 98 aa9.18□□□□□ -0.94
ACTN4-202ENST00000390009 LINC01554Q52M75 96 aa9.17□□□□□ -0.94
ACTN4-202ENST00000390009 S4R3F8 94 aa9.17□□□□□ -0.94
ACTN4-202ENST00000390009 H1FX-AS1Q4G0G2 97 aa9.14□□□□□ -0.95
ACTN4-202ENST00000390009 SEC61BP60468 96 aaKnown RBP9.13□□□□□ -0.95
ACTN4-202ENST00000390009 CSAG1Q6PB30 78 aa9.07□□□□□ -0.96
ACTN4-202ENST00000390009 A0A1B0GU33 70 aa9.04□□□□□ -0.96
ACTN4-202ENST00000390009 MUC17Q685J3 4493 aa9.01□□□□□ -0.97
ACTN4-202ENST00000390009 H0YAA0 97 aa8.99□□□□□ -0.97
ACTN4-202ENST00000390009 KRTAP4-1Q9BYQ7 146 aa8.98□□□□□ -0.97
ACTN4-202ENST00000390009 PCLOQ9Y6V0 5065 aa8.97□□□□□ -0.97
ACTN4-202ENST00000390009 KRTAP10-6P60371 365 aaPredicted RBP8.95□□□□□ -0.98
ACTN4-202ENST00000390009 KRTAP3-2Q9BYR7 98 aa8.93□□□□□ -0.98
ACTN4-202ENST00000390009 HERC1Q15751 4861 aa8.88□□□□□ -0.99
ACTN4-202ENST00000390009 P0C880 135 aa8.84□□□□□ -0.99
ACTN4-202ENST00000390009 HMCN2Q8NDA2 5059 aa8.81□□□□□ -1
ACTN4-202ENST00000390009 KRTAP25-1Q3LHN0 102 aa8.79□□□□□ -1
ACTN4-202ENST00000390009 KRTAP13-4Q3LI77 160 aa8.78□□□□□ -1
ACTN4-202ENST00000390009 KRTAP19-2Q3LHN2 52 aa8.78□□□□□ -1
ACTN4-202ENST00000390009 MUC2Q02817 5179 aa8.71□□□□□ -1.02
ACTN4-202ENST00000390009 H3BS24 57 aa8.71□□□□□ -1.02
ACTN4-202ENST00000390009 A0A0D9SG42 100 aa8.66□□□□□ -1.02
ACTN4-202ENST00000390009 K7ERS5 55 aa8.65□□□□□ -1.03
ACTN4-202ENST00000390009 ROMO1P60602 79 aa8.62□□□□□ -1.03
ACTN4-202ENST00000390009 M0QZ58 72 aa8.59□□□□□ -1.03
ACTN4-202ENST00000390009 CRIPTQ9P021 101 aa8.57□□□□□ -1.04
ACTN4-202ENST00000390009 FLGP20930 4061 aaPredicted RBP8.56□□□□□ -1.04
ACTN4-202ENST00000390009 R4GN34 69 aa8.48□□□□□ -1.05
ACTN4-202ENST00000390009 KRTAP12-2P59991 146 aa8.46□□□□□ -1.06
ACTN4-202ENST00000390009 LORP23490 312 aaPredicted RBP8.45□□□□□ -1.06
ACTN4-202ENST00000390009 KRTAP12-1P59990 96 aa8.44□□□□□ -1.06
ACTN4-202ENST00000390009 LCE2CQ5TA81 110 aa8.44□□□□□ -1.06
ACTN4-202ENST00000390009 SPINT4Q6UDR6 99 aa8.42□□□□□ -1.06
ACTN4-202ENST00000390009 UBR4Q5T4S7 5183 aa8.38□□□□□ -1.07
ACTN4-202ENST00000390009 RNF213Q63HN8 5207 aa8.36□□□□□ -1.07
ACTN4-202ENST00000390009 FAT4Q6V0I7 4981 aa8.34□□□□□ -1.07
ACTN4-202ENST00000390009 MT1HP80294 61 aa8.24□□□□□ -1.09
ACTN4-202ENST00000390009 C10orf95Q9H7T3 257 aa8.24□□□□□ -1.09
ACTN4-202ENST00000390009 M0R2T5 61 aa8.21□□□□□ -1.1
ACTN4-202ENST00000390009 KRTAP15-1Q3LI76 137 aa8.08□□□□□ -1.12
ACTN4-202ENST00000390009 MT2AP02795 61 aa8□□□□□ -1.13
ACTN4-202ENST00000390009 SPRR2GQ9BYE4 73 aa7.99□□□□□ -1.13
ACTN4-202ENST00000390009 KRTAP9-8Q9BYQ0 159 aa7.99□□□□□ -1.13
ACTN4-202ENST00000390009 CAMK2N1Q7Z7J9 78 aa7.98□□□□□ -1.13
ACTN4-202ENST00000390009 NDUFAF8A1L188 74 aa7.97□□□□□ -1.13
ACTN4-202ENST00000390009 MT1FP04733 61 aa7.97□□□□□ -1.13
ACTN4-202ENST00000390009 KRTAP19-1Q8IUB9 90 aa7.96□□□□□ -1.13
ACTN4-202ENST00000390009 KRTAP10-10P60014 251 aa7.96□□□□□ -1.14
ACTN4-202ENST00000390009 PLAC4Q8WY50 150 aa7.81□□□□□ -1.16
ACTN4-202ENST00000390009 KRTAP19-8Q3LI54 63 aa7.72□□□□□ -1.17
ACTN4-202ENST00000390009 KRTAP9-3Q9BYQ3 159 aa7.67□□□□□ -1.18
ACTN4-202ENST00000390009 LCE2AQ5TA79 106 aaPredicted RBP7.65□□□□□ -1.18
ACTN4-202ENST00000390009 TNP1P09430 55 aa7.64□□□□□ -1.19
ACTN4-202ENST00000390009 MT1BP07438 61 aa7.62□□□□□ -1.19
ACTN4-202ENST00000390009 PP632Q6XCG6 107 aa7.58□□□□□ -1.2
ACTN4-202ENST00000390009 KRTAP23-1A1A580 65 aa7.46□□□□□ -1.22
ACTN4-202ENST00000390009 KRTAP10-5P60370 271 aa7.45□□□□□ -1.22
ACTN4-202ENST00000390009 MT1XP80297 61 aa7.45□□□□□ -1.22
ACTN4-202ENST00000390009 LCE2BO14633 110 aa7.43□□□□□ -1.22
ACTN4-202ENST00000390009 LUZP6Q538Z0 58 aa7.31□□□□□ -1.24
ACTN4-202ENST00000390009 LCE3AQ5TA76 89 aa7.28□□□□□ -1.24
ACTN4-202ENST00000390009 PRO2289Q9P1D8 64 aa7.28□□□□□ -1.24
ACTN4-202ENST00000390009 USH2AO75445 5202 aa7.2□□□□□ -1.26
ACTN4-202ENST00000390009 KRTAP10-7P60409 375 aaPredicted RBP7.19□□□□□ -1.26
ACTN4-202ENST00000390009 KRTAP10-12P60413 245 aa7.18□□□□□ -1.26
ACTN4-202ENST00000390009 KRTAP8-1Q8IUC2 63 aa7.12□□□□□ -1.27
ACTN4-202ENST00000390009 A0A0A0MQY5 61 aa7.11□□□□□ -1.27
ACTN4-202ENST00000390009 SPRR5A0A1B0GTR4 108 aa7.06□□□□□ -1.28
ACTN4-202ENST00000390009 KRTAP12-3P60328 96 aa6.97□□□□□ -1.29
ACTN4-202ENST00000390009 SSPOA2VEC9 5147 aa6.92□□□□□ -1.3
ACTN4-202ENST00000390009 KMT2DO14686 5537 aa6.85□□□□□ -1.31
ACTN4-202ENST00000390009 KRTAP4-8A0A0G2JLE6 195 aa6.85□□□□□ -1.31
ACTN4-202ENST00000390009 KRTAP4-8Q9BYQ9 185 aa6.85□□□□□ -1.31
ACTN4-202ENST00000390009 KRTAP19-6Q3LI70 58 aa6.84□□□□□ -1.31
ACTN4-202ENST00000390009 KRTAP19-5Q3LI72 72 aa6.82□□□□□ -1.32
ACTN4-202ENST00000390009 FSIP2Q5CZC0 6907 aa6.8□□□□□ -1.32
ACTN4-202ENST00000390009 LCE2DQ5TA82 110 aaPredicted RBP6.77□□□□□ -1.33
ACTN4-202ENST00000390009 KRTAP19-7Q3SYF9 63 aa6.65□□□□□ -1.35
ACTN4-202ENST00000390009 LCE3CQ5T5A8 94 aa6.53□□□□□ -1.36
ACTN4-202ENST00000390009 FCGBPQ9Y6R7 5405 aaPredicted RBP6.51□□□□□ -1.37
ACTN4-202ENST00000390009 MT1EP04732 61 aa6.5□□□□□ -1.37
ACTN4-202ENST00000390009 MT1LQ93083 61 aa6.42□□□□□ -1.38
ACTN4-202ENST00000390009 INE1O15225 51 aa6.41□□□□□ -1.38
ACTN4-202ENST00000390009 KRTAP19-4Q3LI73 84 aa6.37□□□□□ -1.39
ACTN4-202ENST00000390009 KRTAP9-2Q9BYQ4 174 aa6.37□□□□□ -1.39
ACTN4-202ENST00000390009 KRTAP4-7Q9BYR0 210 aa6.33□□□□□ -1.4
ACTN4-202ENST00000390009 KRTAP9-6A8MVA2 160 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms