RNA–Protein interactions for RNA: ENST00000389463.8

LAMA4-205, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-205ENST00000389463 AKAP9Q99996 3911 aa4.71□□□□□ -1.65
LAMA4-205ENST00000389463 KRTAP12-3P60328 96 aa4.7□□□□□ -1.66
LAMA4-205ENST00000389463 ZNF469Q96JG9 3925 aaPredicted RBP4.69□□□□□ -1.66
LAMA4-205ENST00000389463 DNAH11Q96DT5 4516 aa4.67□□□□□ -1.66
LAMA4-205ENST00000389463 LORP23490 312 aaPredicted RBP4.66□□□□□ -1.66
LAMA4-205ENST00000389463 KRTAP8-1Q8IUC2 63 aa4.66□□□□□ -1.66
LAMA4-205ENST00000389463 LCE3AQ5TA76 89 aa4.64□□□□□ -1.67
LAMA4-205ENST00000389463 DNAH10Q8IVF4 4471 aa4.64□□□□□ -1.67
LAMA4-205ENST00000389463 MT1HP80294 61 aa4.64□□□□□ -1.67
LAMA4-205ENST00000389463 CSMD3Q7Z407 3707 aa4.63□□□□□ -1.67
LAMA4-205ENST00000389463 KRTAP4-1Q9BYQ7 146 aa4.63□□□□□ -1.67
LAMA4-205ENST00000389463 PLECQ15149 4684 aaKnown RBP4.61□□□□□ -1.67
LAMA4-205ENST00000389463 KRTAP23-1A1A580 65 aa4.61□□□□□ -1.67
LAMA4-205ENST00000389463 KRTAP10-5P60370 271 aa4.58□□□□□ -1.68
LAMA4-205ENST00000389463 DNHD1Q96M86 4753 aa4.57□□□□□ -1.68
LAMA4-205ENST00000389463 DNAH2Q9P225 4427 aa4.56□□□□□ -1.68
LAMA4-205ENST00000389463 VPS13DQ5THJ4 4388 aa4.55□□□□□ -1.68
LAMA4-205ENST00000389463 DNAH17Q9UFH2 4485 aa4.53□□□□□ -1.68
LAMA4-205ENST00000389463 MT2AP02795 61 aa4.52□□□□□ -1.69
LAMA4-205ENST00000389463 DYNC1H1Q14204 4646 aaKnown RBP4.51□□□□□ -1.69
LAMA4-205ENST00000389463 FAT2Q9NYQ8 4349 aa4.48□□□□□ -1.69
LAMA4-205ENST00000389463 LRP1BQ9NZR2 4599 aa4.47□□□□□ -1.69
LAMA4-205ENST00000389463 DYNC2H1Q8NCM8 4307 aaKnown RBP4.43□□□□□ -1.7
LAMA4-205ENST00000389463 SPRR2GQ9BYE4 73 aa4.43□□□□□ -1.7
LAMA4-205ENST00000389463 MT1FP04733 61 aa4.42□□□□□ -1.7
LAMA4-205ENST00000389463 DNAH3Q8TD57 4116 aa4.41□□□□□ -1.7
LAMA4-205ENST00000389463 STARD9Q9P2P6 4700 aa4.4□□□□□ -1.7
LAMA4-205ENST00000389463 RYR1P21817 5038 aa4.37□□□□□ -1.71
LAMA4-205ENST00000389463 SACSQ9NZJ4 4579 aa4.36□□□□□ -1.71
LAMA4-205ENST00000389463 SPRR2FQ96RM1 72 aa4.36□□□□□ -1.71
LAMA4-205ENST00000389463 FAT1Q14517 4588 aa4.35□□□□□ -1.71
LAMA4-205ENST00000389463 ANK2Q01484 3957 aa4.33□□□□□ -1.72
LAMA4-205ENST00000389463 PRKDCP78527 4128 aaKnown RBP4.32□□□□□ -1.72
LAMA4-205ENST00000389463 DNAH6Q9C0G6 4158 aa4.28□□□□□ -1.73
LAMA4-205ENST00000389463 KRTAP10-7P60409 375 aaPredicted RBP4.27□□□□□ -1.73
LAMA4-205ENST00000389463 DNAH8Q96JB1 4490 aa4.25□□□□□ -1.73
LAMA4-205ENST00000389463 KRTAP17-1Q9BYP8 105 aa4.25□□□□□ -1.73
LAMA4-205ENST00000389463 RYR3Q15413 4870 aa4.23□□□□□ -1.73
LAMA4-205ENST00000389463 KRTAP19-5Q3LI72 72 aa4.23□□□□□ -1.73
LAMA4-205ENST00000389463 KMT2AQ03164 3969 aa4.21□□□□□ -1.74
LAMA4-205ENST00000389463 APOBP04114 4563 aaKnown RBP4.21□□□□□ -1.74
LAMA4-205ENST00000389463 VPS13BQ7Z7G8 4022 aa4.19□□□□□ -1.74
LAMA4-205ENST00000389463 DNAH7Q8WXX0 4024 aa4.18□□□□□ -1.74
LAMA4-205ENST00000389463 FAT3Q8TDW7 4589 aa4.17□□□□□ -1.74
LAMA4-205ENST00000389463 SPRR2EP22531 72 aa4.15□□□□□ -1.75
LAMA4-205ENST00000389463 SPRR2BP35325 72 aa4.15□□□□□ -1.75
LAMA4-205ENST00000389463 SPRR2AP35326 72 aa4.15□□□□□ -1.75
LAMA4-205ENST00000389463 KRTAP19-8Q3LI54 63 aa4.14□□□□□ -1.75
LAMA4-205ENST00000389463 CMYA5Q8N3K9 4069 aa4.13□□□□□ -1.75
LAMA4-205ENST00000389463 LCE3CQ5T5A8 94 aa4.1□□□□□ -1.75
LAMA4-205ENST00000389463 KRTAP19-4Q3LI73 84 aa4.1□□□□□ -1.75
LAMA4-205ENST00000389463 RYR2Q92736 4967 aa4.1□□□□□ -1.75
LAMA4-205ENST00000389463 KRTAP19-1Q8IUB9 90 aa4.08□□□□□ -1.76
LAMA4-205ENST00000389463 LYSTQ99698 3801 aa4.08□□□□□ -1.76
LAMA4-205ENST00000389463 HERC1Q15751 4861 aa4.05□□□□□ -1.76
LAMA4-205ENST00000389463 KIAA1109Q2LD37 5005 aa4.05□□□□□ -1.76
LAMA4-205ENST00000389463 BIRC6Q9NR09 4857 aa4.04□□□□□ -1.76
LAMA4-205ENST00000389463 KRTAP9-8Q9BYQ0 159 aa4.03□□□□□ -1.76
LAMA4-205ENST00000389463 SPRR2DP22532 72 aa4.02□□□□□ -1.77
LAMA4-205ENST00000389463 LRP1Q07954 4544 aaKnown RBP4.01□□□□□ -1.77
LAMA4-205ENST00000389463 MT1XP80297 61 aa3.99□□□□□ -1.77
LAMA4-205ENST00000389463 MT1BP07438 61 aa3.99□□□□□ -1.77
LAMA4-205ENST00000389463 MYCBP2O75592 4640 aa3.98□□□□□ -1.77
LAMA4-205ENST00000389463 LCE2BO14633 110 aa3.97□□□□□ -1.77
LAMA4-205ENST00000389463 LCE2CQ5TA81 110 aa3.97□□□□□ -1.77
LAMA4-205ENST00000389463 PKHD1L1Q86WI1 4243 aa3.97□□□□□ -1.77
LAMA4-205ENST00000389463 HSPG2P98160 4391 aa3.96□□□□□ -1.77
LAMA4-205ENST00000389463 KRTAP9-3Q9BYQ3 159 aa3.96□□□□□ -1.78
LAMA4-205ENST00000389463 HERC2O95714 4834 aa3.94□□□□□ -1.78
LAMA4-205ENST00000389463 FRAS1Q86XX4 4008 aa3.94□□□□□ -1.78
LAMA4-205ENST00000389463 HECTD4Q9Y4D8 3996 aa3.92□□□□□ -1.78
LAMA4-205ENST00000389463 PKD1P98161 4303 aa3.89□□□□□ -1.79
LAMA4-205ENST00000389463 LCE3BQ5TA77 95 aa3.87□□□□□ -1.79
LAMA4-205ENST00000389463 MT1GP13640 62 aa3.85□□□□□ -1.79
LAMA4-205ENST00000389463 KRTAP12-4P60329 112 aa3.85□□□□□ -1.79
LAMA4-205ENST00000389463 KRTAP4-8A0A0G2JLE6 195 aa3.85□□□□□ -1.79
LAMA4-205ENST00000389463 KRTAP4-8Q9BYQ9 185 aa3.85□□□□□ -1.79
LAMA4-205ENST00000389463 HYDINQ4G0P3 5121 aa3.82□□□□□ -1.8
LAMA4-205ENST00000389463 PCLOQ9Y6V0 5065 aa3.81□□□□□ -1.8
LAMA4-205ENST00000389463 KRTAP9-2Q9BYQ4 174 aa3.76□□□□□ -1.81
LAMA4-205ENST00000389463 PKHD1P08F94 4074 aa3.75□□□□□ -1.81
LAMA4-205ENST00000389463 KRTAP19-2Q3LHN2 52 aa3.74□□□□□ -1.81
LAMA4-205ENST00000389463 LRP2P98164 4655 aa3.74□□□□□ -1.81
LAMA4-205ENST00000389463 LPAP08519 4548 aa3.72□□□□□ -1.81
LAMA4-205ENST00000389463 KRTAP19-3Q7Z4W3 81 aa3.72□□□□□ -1.81
LAMA4-205ENST00000389463 KRTAP19-6Q3LI70 58 aa3.66□□□□□ -1.82
LAMA4-205ENST00000389463 TNXBP22105 4242 aa3.66□□□□□ -1.82
LAMA4-205ENST00000389463 SPRR5A0A1B0GTR4 108 aa3.66□□□□□ -1.82
LAMA4-205ENST00000389463 LCE2DQ5TA82 110 aaPredicted RBP3.66□□□□□ -1.82
LAMA4-205ENST00000389463 MUC17Q685J3 4493 aa3.62□□□□□ -1.83
LAMA4-205ENST00000389463 MT1EP04732 61 aa3.62□□□□□ -1.83
LAMA4-205ENST00000389463 MT1LQ93083 61 aa3.62□□□□□ -1.83
LAMA4-205ENST00000389463 KRTAP9-6A0A140TA67 174 aa3.61□□□□□ -1.83
LAMA4-205ENST00000389463 KMT2CQ8NEZ4 4911 aaKnown RBP3.58□□□□□ -1.84
LAMA4-205ENST00000389463 LCE2AQ5TA79 106 aaPredicted RBP3.57□□□□□ -1.84
LAMA4-205ENST00000389463 LCE3DQ9BYE3 92 aa3.57□□□□□ -1.84
LAMA4-205ENST00000389463 FLGP20930 4061 aaPredicted RBP3.57□□□□□ -1.84
LAMA4-205ENST00000389463 KRTAP4-7Q9BYR0 210 aa3.55□□□□□ -1.84
LAMA4-205ENST00000389463 EPPK1P58107 5090 aaKnown RBP3.54□□□□□ -1.84
LAMA4-205ENST00000389463 MT4P47944 62 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms