RNA–Protein interactions for RNA: ENST00000382500.3

FOXD4-201, Transcript of forkhead box D4, humanhuman

APPRIS P1 BASIC

Gene FOXD4, Length 1,974 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4-201ENST00000382500 SPATA8Q6RVD6 105 aa10.3□□□□□ -0.76
FOXD4-201ENST00000382500 RPL37P61927 97 aaKnown RBP10.3□□□□□ -0.76
FOXD4-201ENST00000382500 ABCA13Q86UQ4 5058 aa10.27□□□□□ -0.77
FOXD4-201ENST00000382500 MIR22HGQ0VDD5 57 aa10.25□□□□□ -0.77
FOXD4-201ENST00000382500 PCLOQ9Y6V0 5065 aa10.22□□□□□ -0.77
FOXD4-201ENST00000382500 KRTAP3-1Q9BYR8 98 aa10.2□□□□□ -0.78
FOXD4-201ENST00000382500 TPRXLQ17RH7 258 aa10.19□□□□□ -0.78
FOXD4-201ENST00000382500 COX6B2Q6YFQ2 88 aa10.17□□□□□ -0.78
FOXD4-201ENST00000382500 J3QL48 77 aa10.1□□□□□ -0.79
FOXD4-201ENST00000382500 LPAP08519 4548 aa9.96□□□□□ -0.81
FOXD4-201ENST00000382500 A0A1B0GU33 70 aa9.96□□□□□ -0.81
FOXD4-201ENST00000382500 LRP2P98164 4655 aa9.95□□□□□ -0.82
FOXD4-201ENST00000382500 H1FX-AS1Q4G0G2 97 aa9.95□□□□□ -0.82
FOXD4-201ENST00000382500 H0YAA0 97 aa9.94□□□□□ -0.82
FOXD4-201ENST00000382500 RBM12B-AS1Q9P1G2 102 aa9.94□□□□□ -0.82
FOXD4-201ENST00000382500 SEC61BP60468 96 aaKnown RBP9.81□□□□□ -0.84
FOXD4-201ENST00000382500 S4R3F8 94 aa9.81□□□□□ -0.84
FOXD4-201ENST00000382500 HERC1Q15751 4861 aa9.8□□□□□ -0.84
FOXD4-201ENST00000382500 KRTAP3-3Q9BYR6 98 aa9.8□□□□□ -0.84
FOXD4-201ENST00000382500 PRAC1Q96KF2 57 aa9.78□□□□□ -0.84
FOXD4-201ENST00000382500 ADM2Q7Z4H4 148 aa9.75□□□□□ -0.85
FOXD4-201ENST00000382500 K7ERS5 55 aa9.69□□□□□ -0.86
FOXD4-201ENST00000382500 KRTAP10-6P60371 365 aaPredicted RBP9.69□□□□□ -0.86
FOXD4-201ENST00000382500 KRTAP4-1Q9BYQ7 146 aa9.64□□□□□ -0.87
FOXD4-201ENST00000382500 KRTAP3-2Q9BYR7 98 aa9.63□□□□□ -0.87
FOXD4-201ENST00000382500 MUC17Q685J3 4493 aa9.61□□□□□ -0.87
FOXD4-201ENST00000382500 CSAG1Q6PB30 78 aa9.56□□□□□ -0.88
FOXD4-201ENST00000382500 HMCN2Q8NDA2 5059 aa9.54□□□□□ -0.88
FOXD4-201ENST00000382500 KRTAP13-4Q3LI77 160 aa9.52□□□□□ -0.89
FOXD4-201ENST00000382500 LINC01554Q52M75 96 aa9.5□□□□□ -0.89
FOXD4-201ENST00000382500 P0C880 135 aa9.48□□□□□ -0.89
FOXD4-201ENST00000382500 KRTAP19-2Q3LHN2 52 aa9.42□□□□□ -0.9
FOXD4-201ENST00000382500 A0A0D9SG42 100 aa9.41□□□□□ -0.9
FOXD4-201ENST00000382500 KRTAP25-1Q3LHN0 102 aa9.4□□□□□ -0.9
FOXD4-201ENST00000382500 ROMO1P60602 79 aa9.38□□□□□ -0.91
FOXD4-201ENST00000382500 M0QZ58 72 aa9.33□□□□□ -0.92
FOXD4-201ENST00000382500 MUC2Q02817 5179 aa9.28□□□□□ -0.92
FOXD4-201ENST00000382500 KRTAP12-2P59991 146 aa9.22□□□□□ -0.93
FOXD4-201ENST00000382500 KRTAP12-1P59990 96 aa9.21□□□□□ -0.94
FOXD4-201ENST00000382500 UBR4Q5T4S7 5183 aa9.19□□□□□ -0.94
FOXD4-201ENST00000382500 SPINT4Q6UDR6 99 aa9.15□□□□□ -0.95
FOXD4-201ENST00000382500 CRIPTQ9P021 101 aa9.12□□□□□ -0.95
FOXD4-201ENST00000382500 FLGP20930 4061 aaPredicted RBP9.12□□□□□ -0.95
FOXD4-201ENST00000382500 LCE2CQ5TA81 110 aa9.08□□□□□ -0.96
FOXD4-201ENST00000382500 R4GN34 69 aa9.08□□□□□ -0.96
FOXD4-201ENST00000382500 RNF213Q63HN8 5207 aa9.04□□□□□ -0.96
FOXD4-201ENST00000382500 H3BS24 57 aa9.02□□□□□ -0.97
FOXD4-201ENST00000382500 LORP23490 312 aaPredicted RBP8.98□□□□□ -0.97
FOXD4-201ENST00000382500 FAT4Q6V0I7 4981 aa8.9□□□□□ -0.99
FOXD4-201ENST00000382500 C10orf95Q9H7T3 257 aa8.9□□□□□ -0.99
FOXD4-201ENST00000382500 MT1HP80294 61 aa8.88□□□□□ -0.99
FOXD4-201ENST00000382500 M0R2T5 61 aa8.81□□□□□ -1
FOXD4-201ENST00000382500 MT2AP02795 61 aa8.6□□□□□ -1.03
FOXD4-201ENST00000382500 CAMK2N1Q7Z7J9 78 aa8.59□□□□□ -1.03
FOXD4-201ENST00000382500 KRTAP9-8Q9BYQ0 159 aa8.59□□□□□ -1.03
FOXD4-201ENST00000382500 MT1FP04733 61 aa8.57□□□□□ -1.04
FOXD4-201ENST00000382500 LCE2AQ5TA79 106 aaPredicted RBP8.55□□□□□ -1.04
FOXD4-201ENST00000382500 SPRR2GQ9BYE4 73 aa8.55□□□□□ -1.04
FOXD4-201ENST00000382500 KRTAP10-10P60014 251 aa8.53□□□□□ -1.04
FOXD4-201ENST00000382500 KRTAP19-1Q8IUB9 90 aa8.52□□□□□ -1.05
FOXD4-201ENST00000382500 KRTAP15-1Q3LI76 137 aa8.5□□□□□ -1.05
FOXD4-201ENST00000382500 PP632Q6XCG6 107 aa8.46□□□□□ -1.05
FOXD4-201ENST00000382500 PLAC4Q8WY50 150 aa8.31□□□□□ -1.08
FOXD4-201ENST00000382500 TNP1P09430 55 aa8.3□□□□□ -1.08
FOXD4-201ENST00000382500 KRTAP19-8Q3LI54 63 aa8.28□□□□□ -1.08
FOXD4-201ENST00000382500 KRTAP9-3Q9BYQ3 159 aa8.26□□□□□ -1.09
FOXD4-201ENST00000382500 KRTAP23-1A1A580 65 aa8.26□□□□□ -1.09
FOXD4-201ENST00000382500 MT1BP07438 61 aa8.17□□□□□ -1.1
FOXD4-201ENST00000382500 NDUFAF8A1L188 74 aa8.16□□□□□ -1.1
FOXD4-201ENST00000382500 KRTAP9-2Q9BYQ4 174 aa8.02□□□□□ -1.13
FOXD4-201ENST00000382500 LCE2BO14633 110 aa8□□□□□ -1.13
FOXD4-201ENST00000382500 LCE2DQ5TA82 110 aaPredicted RBP7.99□□□□□ -1.13
FOXD4-201ENST00000382500 KRTAP10-5P60370 271 aa7.97□□□□□ -1.13
FOXD4-201ENST00000382500 MT1XP80297 61 aa7.97□□□□□ -1.13
FOXD4-201ENST00000382500 A0A0A0MQY5 61 aa7.92□□□□□ -1.14
FOXD4-201ENST00000382500 LUZP6Q538Z0 58 aa7.87□□□□□ -1.15
FOXD4-201ENST00000382500 PRO2289Q9P1D8 64 aa7.8□□□□□ -1.16
FOXD4-201ENST00000382500 LCE3AQ5TA76 89 aa7.8□□□□□ -1.16
FOXD4-201ENST00000382500 SPRR5A0A1B0GTR4 108 aa7.77□□□□□ -1.17
FOXD4-201ENST00000382500 USH2AO75445 5202 aa7.72□□□□□ -1.17
FOXD4-201ENST00000382500 KRTAP8-1Q8IUC2 63 aa7.69□□□□□ -1.18
FOXD4-201ENST00000382500 KRTAP10-7P60409 375 aaPredicted RBP7.68□□□□□ -1.18
FOXD4-201ENST00000382500 FSIP2Q5CZC0 6907 aa7.67□□□□□ -1.18
FOXD4-201ENST00000382500 KRTAP10-12P60413 245 aa7.64□□□□□ -1.19
FOXD4-201ENST00000382500 KRTAP9-6A0A140TA67 174 aa7.63□□□□□ -1.19
FOXD4-201ENST00000382500 CRCT1Q9UGL9 99 aa7.63□□□□□ -1.19
FOXD4-201ENST00000382500 KRTAP12-3P60328 96 aa7.47□□□□□ -1.21
FOXD4-201ENST00000382500 SSPOA2VEC9 5147 aa7.44□□□□□ -1.22
FOXD4-201ENST00000382500 KRTAP19-6Q3LI70 58 aa7.41□□□□□ -1.22
FOXD4-201ENST00000382500 KRTAP4-8A0A0G2JLE6 195 aa7.3□□□□□ -1.24
FOXD4-201ENST00000382500 KRTAP4-8Q9BYQ9 185 aa7.3□□□□□ -1.24
FOXD4-201ENST00000382500 KRTAP19-5Q3LI72 72 aa7.26□□□□□ -1.25
FOXD4-201ENST00000382500 KMT2DO14686 5537 aa7.25□□□□□ -1.25
FOXD4-201ENST00000382500 FCGBPQ9Y6R7 5405 aaPredicted RBP7.21□□□□□ -1.26
FOXD4-201ENST00000382500 KRTAP19-7Q3SYF9 63 aa7.11□□□□□ -1.27
FOXD4-201ENST00000382500 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.09□□□□□ -1.27
FOXD4-201ENST00000382500 LCE3CQ5T5A8 94 aa7.02□□□□□ -1.29
FOXD4-201ENST00000382500 MT1EP04732 61 aa6.96□□□□□ -1.3
FOXD4-201ENST00000382500 MACF1Q9UPN3 7388 aaKnown RBP6.95□□□□□ -1.3
FOXD4-201ENST00000382500 KRTAP19-4Q3LI73 84 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms