RNA–Protein interactions for RNA: ENST00000381736.7

NUP58-202, Transcript of nucleoporin 58, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUP58, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-202ENST00000381736 HECTD4Q9Y4D8 3996 aa5.98□□□□□ -1.45
NUP58-202ENST00000381736 DNAH6Q9C0G6 4158 aa5.98□□□□□ -1.45
NUP58-202ENST00000381736 M0R2T5 61 aa5.97□□□□□ -1.45
NUP58-202ENST00000381736 KMT2CQ8NEZ4 4911 aaKnown RBP5.96□□□□□ -1.46
NUP58-202ENST00000381736 CAMK2N1Q7Z7J9 78 aa5.95□□□□□ -1.46
NUP58-202ENST00000381736 KIAA1109Q2LD37 5005 aa5.95□□□□□ -1.46
NUP58-202ENST00000381736 FAT2Q9NYQ8 4349 aa5.94□□□□□ -1.46
NUP58-202ENST00000381736 RYR3Q15413 4870 aa5.93□□□□□ -1.46
NUP58-202ENST00000381736 DNAH8Q96JB1 4490 aa5.91□□□□□ -1.46
NUP58-202ENST00000381736 A0A0A0MQY5 61 aa5.9□□□□□ -1.47
NUP58-202ENST00000381736 VPS13BQ7Z7G8 4022 aa5.89□□□□□ -1.47
NUP58-202ENST00000381736 PKHD1P08F94 4074 aa5.89□□□□□ -1.47
NUP58-202ENST00000381736 R4GN34 69 aa5.89□□□□□ -1.47
NUP58-202ENST00000381736 NDUFAF8A1L188 74 aa5.87□□□□□ -1.47
NUP58-202ENST00000381736 APOBP04114 4563 aaKnown RBP5.86□□□□□ -1.47
NUP58-202ENST00000381736 RYR1P21817 5038 aa5.84□□□□□ -1.47
NUP58-202ENST00000381736 FRAS1Q86XX4 4008 aa5.81□□□□□ -1.48
NUP58-202ENST00000381736 M0QZ58 72 aa5.81□□□□□ -1.48
NUP58-202ENST00000381736 PKD1P98161 4303 aa5.8□□□□□ -1.48
NUP58-202ENST00000381736 KRTAP17-1Q9BYP8 105 aa5.75□□□□□ -1.49
NUP58-202ENST00000381736 LRP1Q07954 4544 aaKnown RBP5.72□□□□□ -1.49
NUP58-202ENST00000381736 H0YAA0 97 aa5.72□□□□□ -1.49
NUP58-202ENST00000381736 C10orf95Q9H7T3 257 aa5.68□□□□□ -1.5
NUP58-202ENST00000381736 HSPG2P98160 4391 aa5.67□□□□□ -1.5
NUP58-202ENST00000381736 EPPK1P58107 5090 aaKnown RBP5.64□□□□□ -1.51
NUP58-202ENST00000381736 KRTAP3-1Q9BYR8 98 aa5.63□□□□□ -1.51
NUP58-202ENST00000381736 MYCBP2O75592 4640 aa5.63□□□□□ -1.51
NUP58-202ENST00000381736 HERC2O95714 4834 aa5.62□□□□□ -1.51
NUP58-202ENST00000381736 BIRC6Q9NR09 4857 aa5.61□□□□□ -1.51
NUP58-202ENST00000381736 PLAC4Q8WY50 150 aa5.56□□□□□ -1.52
NUP58-202ENST00000381736 FAT3Q8TDW7 4589 aa5.55□□□□□ -1.52
NUP58-202ENST00000381736 P0C880 135 aa5.5□□□□□ -1.53
NUP58-202ENST00000381736 KRTAP10-10P60014 251 aa5.43□□□□□ -1.54
NUP58-202ENST00000381736 ABCA13Q86UQ4 5058 aa5.42□□□□□ -1.54
NUP58-202ENST00000381736 TNP1P09430 55 aa5.38□□□□□ -1.55
NUP58-202ENST00000381736 KRTAP4-1Q9BYQ7 146 aa5.37□□□□□ -1.55
NUP58-202ENST00000381736 LRP2P98164 4655 aa5.37□□□□□ -1.55
NUP58-202ENST00000381736 KRTAP3-3Q9BYR6 98 aa5.37□□□□□ -1.55
NUP58-202ENST00000381736 TNXBP22105 4242 aa5.34□□□□□ -1.55
NUP58-202ENST00000381736 PKHD1L1Q86WI1 4243 aa5.34□□□□□ -1.55
NUP58-202ENST00000381736 PP632Q6XCG6 107 aa5.34□□□□□ -1.56
NUP58-202ENST00000381736 KRTAP10-6P60371 365 aaPredicted RBP5.3□□□□□ -1.56
NUP58-202ENST00000381736 KRTAP12-2P59991 146 aa5.28□□□□□ -1.56
NUP58-202ENST00000381736 LPAP08519 4548 aa5.24□□□□□ -1.57
NUP58-202ENST00000381736 KRTAP3-2Q9BYR7 98 aa5.23□□□□□ -1.57
NUP58-202ENST00000381736 PCLOQ9Y6V0 5065 aa5.21□□□□□ -1.57
NUP58-202ENST00000381736 KRTAP13-4Q3LI77 160 aa5.21□□□□□ -1.58
NUP58-202ENST00000381736 KRTAP12-1P59990 96 aa5.21□□□□□ -1.58
NUP58-202ENST00000381736 HERC1Q15751 4861 aa5.19□□□□□ -1.58
NUP58-202ENST00000381736 MT1HP80294 61 aa5.1□□□□□ -1.59
NUP58-202ENST00000381736 LORP23490 312 aaPredicted RBP5.07□□□□□ -1.6
NUP58-202ENST00000381736 KRTAP15-1Q3LI76 137 aa5.04□□□□□ -1.6
NUP58-202ENST00000381736 PRO2289Q9P1D8 64 aa5.04□□□□□ -1.6
NUP58-202ENST00000381736 HMCN2Q8NDA2 5059 aa4.99□□□□□ -1.61
NUP58-202ENST00000381736 MT2AP02795 61 aa4.95□□□□□ -1.62
NUP58-202ENST00000381736 LCE2CQ5TA81 110 aa4.93□□□□□ -1.62
NUP58-202ENST00000381736 UBR4Q5T4S7 5183 aa4.92□□□□□ -1.62
NUP58-202ENST00000381736 RNF213Q63HN8 5207 aa4.91□□□□□ -1.62
NUP58-202ENST00000381736 MUC2Q02817 5179 aa4.9□□□□□ -1.62
NUP58-202ENST00000381736 MT1FP04733 61 aa4.89□□□□□ -1.63
NUP58-202ENST00000381736 KRTAP19-2Q3LHN2 52 aa4.88□□□□□ -1.63
NUP58-202ENST00000381736 FLGP20930 4061 aaPredicted RBP4.83□□□□□ -1.64
NUP58-202ENST00000381736 SPRR2GQ9BYE4 73 aa4.82□□□□□ -1.64
NUP58-202ENST00000381736 MUC17Q685J3 4493 aa4.81□□□□□ -1.64
NUP58-202ENST00000381736 FAT4Q6V0I7 4981 aa4.81□□□□□ -1.64
NUP58-202ENST00000381736 KRTAP9-8Q9BYQ0 159 aa4.76□□□□□ -1.65
NUP58-202ENST00000381736 KRTAP19-1Q8IUB9 90 aa4.73□□□□□ -1.65
NUP58-202ENST00000381736 LCE2DQ5TA82 110 aaPredicted RBP4.67□□□□□ -1.66
NUP58-202ENST00000381736 KRTAP10-12P60413 245 aa4.65□□□□□ -1.67
NUP58-202ENST00000381736 INE1O15225 51 aa4.62□□□□□ -1.67
NUP58-202ENST00000381736 KRTAP19-8Q3LI54 63 aa4.62□□□□□ -1.67
NUP58-202ENST00000381736 KRTAP9-3Q9BYQ3 159 aa4.61□□□□□ -1.67
NUP58-202ENST00000381736 LCE2AQ5TA79 106 aaPredicted RBP4.58□□□□□ -1.68
NUP58-202ENST00000381736 MT1BP07438 61 aa4.55□□□□□ -1.68
NUP58-202ENST00000381736 LCE3AQ5TA76 89 aa4.54□□□□□ -1.68
NUP58-202ENST00000381736 KRTAP23-1A1A580 65 aa4.48□□□□□ -1.69
NUP58-202ENST00000381736 LCE2BO14633 110 aa4.48□□□□□ -1.69
NUP58-202ENST00000381736 FSIP2Q5CZC0 6907 aa4.47□□□□□ -1.69
NUP58-202ENST00000381736 KRTAP12-3P60328 96 aa4.47□□□□□ -1.69
NUP58-202ENST00000381736 MT1XP80297 61 aa4.45□□□□□ -1.7
NUP58-202ENST00000381736 KRTAP10-5P60370 271 aa4.42□□□□□ -1.7
NUP58-202ENST00000381736 KRTAP8-1Q8IUC2 63 aa4.41□□□□□ -1.7
NUP58-202ENST00000381736 KRTAP10-7P60409 375 aaPredicted RBP4.37□□□□□ -1.71
NUP58-202ENST00000381736 CRCT1Q9UGL9 99 aa4.36□□□□□ -1.71
NUP58-202ENST00000381736 KRTAP19-5Q3LI72 72 aa4.26□□□□□ -1.73
NUP58-202ENST00000381736 KRTAP9-2Q9BYQ4 174 aa4.25□□□□□ -1.73
NUP58-202ENST00000381736 KRTAP4-8A0A0G2JLE6 195 aa4.22□□□□□ -1.73
NUP58-202ENST00000381736 KRTAP4-8Q9BYQ9 185 aa4.22□□□□□ -1.73
NUP58-202ENST00000381736 SPRR2FQ96RM1 72 aa4.22□□□□□ -1.73
NUP58-202ENST00000381736 KRTAP19-6Q3LI70 58 aa4.2□□□□□ -1.74
NUP58-202ENST00000381736 USH2AO75445 5202 aa4.18□□□□□ -1.74
NUP58-202ENST00000381736 OBSCNQ5VST9 7968 aa4.11□□□□□ -1.75
NUP58-202ENST00000381736 SYNE1Q8NF91 8797 aaKnown RBP4.1□□□□□ -1.75
NUP58-202ENST00000381736 LCE3CQ5T5A8 94 aa4.03□□□□□ -1.76
NUP58-202ENST00000381736 SSPOA2VEC9 5147 aa3.98□□□□□ -1.77
NUP58-202ENST00000381736 SPRR5A0A1B0GTR4 108 aa3.97□□□□□ -1.77
NUP58-202ENST00000381736 KRTAP19-4Q3LI73 84 aa3.97□□□□□ -1.77
NUP58-202ENST00000381736 SPRR2EP22531 72 aa3.96□□□□□ -1.78
NUP58-202ENST00000381736 SPRR2BP35325 72 aa3.96□□□□□ -1.78
NUP58-202ENST00000381736 SPRR2AP35326 72 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms