RNA–Protein interactions for RNA: ENST00000381714.7

HMG20A-202, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,112 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-202ENST00000381714 Q6ZRN7 208 aaPredicted RBP4.19□□□□□ -1.74
HMG20A-202ENST00000381714 TGP01266 2768 aa4.15□□□□□ -1.75
HMG20A-202ENST00000381714 SRRM2Q9UQ35 2752 aaKnown RBP4.15□□□□□ -1.75
HMG20A-202ENST00000381714 BIRC6Q9NR09 4857 aa4.14□□□□□ -1.75
HMG20A-202ENST00000381714 HERC2O95714 4834 aa4.14□□□□□ -1.75
HMG20A-202ENST00000381714 EPPK1P58107 5090 aaKnown RBP4.14□□□□□ -1.75
HMG20A-202ENST00000381714 Q6ZSA8 131 aa4.14□□□□□ -1.75
HMG20A-202ENST00000381714 KRTAP13-1Q8IUC0 172 aa4.14□□□□□ -1.75
HMG20A-202ENST00000381714 KRTAP10-4P60372 401 aaPredicted RBP4.12□□□□□ -1.75
HMG20A-202ENST00000381714 FLGP20930 4061 aaPredicted RBP4.12□□□□□ -1.75
HMG20A-202ENST00000381714 COX6B2Q6YFQ2 88 aa4.11□□□□□ -1.75
HMG20A-202ENST00000381714 S4R3F8 94 aa4.11□□□□□ -1.75
HMG20A-202ENST00000381714 H0YAA0 97 aa4.1□□□□□ -1.75
HMG20A-202ENST00000381714 A0A1B0GVY2 172 aa4.1□□□□□ -1.75
HMG20A-202ENST00000381714 ABCA13Q86UQ4 5058 aa4.1□□□□□ -1.75
HMG20A-202ENST00000381714 C10orf95Q9H7T3 257 aa4.1□□□□□ -1.75
HMG20A-202ENST00000381714 KRTAP17-1Q9BYP8 105 aa4.06□□□□□ -1.76
HMG20A-202ENST00000381714 R4GN34 69 aa4.05□□□□□ -1.76
HMG20A-202ENST00000381714 LRP1Q07954 4544 aaKnown RBP4.05□□□□□ -1.76
HMG20A-202ENST00000381714 KRTAP13-2Q52LG2 175 aa4.04□□□□□ -1.76
HMG20A-202ENST00000381714 KRTAP10-2P60368 255 aa4.03□□□□□ -1.76
HMG20A-202ENST00000381714 M0QZ58 72 aa4.01□□□□□ -1.77
HMG20A-202ENST00000381714 KRTAP10-1P60331 282 aa4.01□□□□□ -1.77
HMG20A-202ENST00000381714 MYCBP2O75592 4640 aa3.99□□□□□ -1.77
HMG20A-202ENST00000381714 KRTAP13-3Q3SY46 172 aa3.98□□□□□ -1.77
HMG20A-202ENST00000381714 KRTAP23-1A1A580 65 aa3.98□□□□□ -1.77
HMG20A-202ENST00000381714 PLAC4Q8WY50 150 aa3.91□□□□□ -1.78
HMG20A-202ENST00000381714 TPRXLQ17RH7 258 aa3.87□□□□□ -1.79
HMG20A-202ENST00000381714 RPS29P62273 56 aaKnown RBP3.85□□□□□ -1.79
HMG20A-202ENST00000381714 KRTAP15-1Q3LI76 137 aa3.85□□□□□ -1.79
HMG20A-202ENST00000381714 KRTAP1-4P0C5Y4 121 aa3.83□□□□□ -1.8
HMG20A-202ENST00000381714 KRTAP10-8P60410 259 aa3.83□□□□□ -1.8
HMG20A-202ENST00000381714 PCLOQ9Y6V0 5065 aa3.78□□□□□ -1.8
HMG20A-202ENST00000381714 LRP2P98164 4655 aa3.78□□□□□ -1.8
HMG20A-202ENST00000381714 KIAA1109Q2LD37 5005 aa3.77□□□□□ -1.81
HMG20A-202ENST00000381714 HMCN2Q8NDA2 5059 aa3.77□□□□□ -1.81
HMG20A-202ENST00000381714 KRTAP12-2P59991 146 aa3.76□□□□□ -1.81
HMG20A-202ENST00000381714 KRTAP3-1Q9BYR8 98 aa3.74□□□□□ -1.81
HMG20A-202ENST00000381714 Q5VSD8 79 aa3.73□□□□□ -1.81
HMG20A-202ENST00000381714 PRO2289Q9P1D8 64 aa3.73□□□□□ -1.81
HMG20A-202ENST00000381714 PP632Q6XCG6 107 aa3.72□□□□□ -1.81
HMG20A-202ENST00000381714 LPAP08519 4548 aa3.72□□□□□ -1.81
HMG20A-202ENST00000381714 TNP1P09430 55 aa3.71□□□□□ -1.82
HMG20A-202ENST00000381714 KRTAP19-2Q3LHN2 52 aa3.71□□□□□ -1.82
HMG20A-202ENST00000381714 KRTAP13-4Q3LI77 160 aa3.71□□□□□ -1.82
HMG20A-202ENST00000381714 M0R2T5 61 aa3.69□□□□□ -1.82
HMG20A-202ENST00000381714 KRTAP12-1P59990 96 aa3.69□□□□□ -1.82
HMG20A-202ENST00000381714 KRTAP10-6P60371 365 aaPredicted RBP3.66□□□□□ -1.82
HMG20A-202ENST00000381714 XP32Q5T750 250 aa3.66□□□□□ -1.82
HMG20A-202ENST00000381714 MT1HL1P0DM35 61 aa3.65□□□□□ -1.83
HMG20A-202ENST00000381714 HERC1Q15751 4861 aa3.59□□□□□ -1.84
HMG20A-202ENST00000381714 KRTAP3-2Q9BYR7 98 aa3.53□□□□□ -1.84
HMG20A-202ENST00000381714 INE1O15225 51 aa3.51□□□□□ -1.85
HMG20A-202ENST00000381714 LCE2DQ5TA82 110 aaPredicted RBP3.49□□□□□ -1.85
HMG20A-202ENST00000381714 KRTAP3-3Q9BYR6 98 aa3.49□□□□□ -1.85
HMG20A-202ENST00000381714 KRTAP4-5Q9BYR2 181 aa3.46□□□□□ -1.85
HMG20A-202ENST00000381714 LCE2CQ5TA81 110 aa3.38□□□□□ -1.87
HMG20A-202ENST00000381714 RNF213Q63HN8 5207 aa3.32□□□□□ -1.88
HMG20A-202ENST00000381714 FAT4Q6V0I7 4981 aa3.29□□□□□ -1.88
HMG20A-202ENST00000381714 KRTAP10-10P60014 251 aa3.28□□□□□ -1.88
HMG20A-202ENST00000381714 KRTAP4-1Q9BYQ7 146 aa3.27□□□□□ -1.89
HMG20A-202ENST00000381714 LCE2AQ5TA79 106 aaPredicted RBP3.25□□□□□ -1.89
HMG20A-202ENST00000381714 LORP23490 312 aaPredicted RBP3.24□□□□□ -1.89
HMG20A-202ENST00000381714 UBR4Q5T4S7 5183 aa3.22□□□□□ -1.89
HMG20A-202ENST00000381714 MUC2Q02817 5179 aa3.15□□□□□ -1.9
HMG20A-202ENST00000381714 LCE3AQ5TA76 89 aa3.12□□□□□ -1.91
HMG20A-202ENST00000381714 KRTAP9-8Q9BYQ0 159 aa3.08□□□□□ -1.92
HMG20A-202ENST00000381714 KRTAP12-3P60328 96 aa3.07□□□□□ -1.92
HMG20A-202ENST00000381714 KRTAP10-12P60413 245 aa3.05□□□□□ -1.92
HMG20A-202ENST00000381714 USH2AO75445 5202 aa3.03□□□□□ -1.92
HMG20A-202ENST00000381714 SSPOA2VEC9 5147 aa3.02□□□□□ -1.93
HMG20A-202ENST00000381714 MT1HP80294 61 aa3.01□□□□□ -1.93
HMG20A-202ENST00000381714 KRTAP9-3Q9BYQ3 159 aa2.97□□□□□ -1.93
HMG20A-202ENST00000381714 KRTAP19-8Q3LI54 63 aa2.96□□□□□ -1.93
HMG20A-202ENST00000381714 LCE2BO14633 110 aa2.95□□□□□ -1.94
HMG20A-202ENST00000381714 SPRR2GQ9BYE4 73 aa2.94□□□□□ -1.94
HMG20A-202ENST00000381714 KRTAP19-1Q8IUB9 90 aa2.91□□□□□ -1.94
HMG20A-202ENST00000381714 CRCT1Q9UGL9 99 aa2.9□□□□□ -1.95
HMG20A-202ENST00000381714 SPRR5A0A1B0GTR4 108 aa2.89□□□□□ -1.95
HMG20A-202ENST00000381714 MT2AP02795 61 aa2.85□□□□□ -1.95
HMG20A-202ENST00000381714 KRTAP8-1Q8IUC2 63 aa2.84□□□□□ -1.96
HMG20A-202ENST00000381714 KRTAP10-5P60370 271 aa2.83□□□□□ -1.96
HMG20A-202ENST00000381714 MT1FP04733 61 aa2.82□□□□□ -1.96
HMG20A-202ENST00000381714 MT1BP07438 61 aa2.82□□□□□ -1.96
HMG20A-202ENST00000381714 KRTAP19-6Q3LI70 58 aa2.76□□□□□ -1.97
HMG20A-202ENST00000381714 LCE3CQ5T5A8 94 aa2.74□□□□□ -1.97
HMG20A-202ENST00000381714 KRTAP19-5Q3LI72 72 aa2.72□□□□□ -1.97
HMG20A-202ENST00000381714 MT1XP80297 61 aa2.68□□□□□ -1.98
HMG20A-202ENST00000381714 KRTAP10-7P60409 375 aaPredicted RBP2.66□□□□□ -1.98
HMG20A-202ENST00000381714 FSIP2Q5CZC0 6907 aa2.66□□□□□ -1.98
HMG20A-202ENST00000381714 KRTAP5-9P26371 169 aa2.62□□□□□ -1.99
HMG20A-202ENST00000381714 KRTAP12-4P60329 112 aa2.61□□□□□ -1.99
HMG20A-202ENST00000381714 SYNE1Q8NF91 8797 aaKnown RBP2.58□□□□□ -2
HMG20A-202ENST00000381714 FCGBPQ9Y6R7 5405 aaPredicted RBP2.51□□□□□ -2.01
HMG20A-202ENST00000381714 KRTAP4-8A0A0G2JLE6 195 aa2.5□□□□□ -2.01
HMG20A-202ENST00000381714 KRTAP4-8Q9BYQ9 185 aa2.5□□□□□ -2.01
HMG20A-202ENST00000381714 KRTAP4-7Q9BYR0 210 aa2.49□□□□□ -2.01
HMG20A-202ENST00000381714 KRTAP19-4Q3LI73 84 aa2.48□□□□□ -2.01
HMG20A-202ENST00000381714 LCE3BQ5TA77 95 aa2.47□□□□□ -2.01
HMG20A-202ENST00000381714 KRTAP19-7Q3SYF9 63 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms