RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 RPS29P62273 56 aaKnown RBP9.69□□□□□ -0.86
SMARCD1-201ENST00000381513 KRTAP12-1P59990 96 aa9.61□□□□□ -0.87
SMARCD1-201ENST00000381513 XP32Q5T750 250 aa9.6□□□□□ -0.87
SMARCD1-201ENST00000381513 SMR3BP02814 79 aaPredicted RBP9.59□□□□□ -0.87
SMARCD1-201ENST00000381513 PLAC4Q8WY50 150 aa9.48□□□□□ -0.89
SMARCD1-201ENST00000381513 KRTAP10-8P60410 259 aa9.45□□□□□ -0.9
SMARCD1-201ENST00000381513 FAT2Q9NYQ8 4349 aa9.42□□□□□ -0.9
SMARCD1-201ENST00000381513 M0QZ58 72 aa9.31□□□□□ -0.92
SMARCD1-201ENST00000381513 PKD1P98161 4303 aa9.26□□□□□ -0.93
SMARCD1-201ENST00000381513 SACSQ9NZJ4 4579 aa9.24□□□□□ -0.93
SMARCD1-201ENST00000381513 FAT1Q14517 4588 aa9.21□□□□□ -0.93
SMARCD1-201ENST00000381513 HYDINQ4G0P3 5121 aa9.18□□□□□ -0.94
SMARCD1-201ENST00000381513 R4GN34 69 aa9.13□□□□□ -0.95
SMARCD1-201ENST00000381513 PKHD1P08F94 4074 aa9.12□□□□□ -0.95
SMARCD1-201ENST00000381513 MYCBP2O75592 4640 aa9.1□□□□□ -0.95
SMARCD1-201ENST00000381513 DYNC1H1Q14204 4646 aaKnown RBP9.1□□□□□ -0.95
SMARCD1-201ENST00000381513 APOBP04114 4563 aaKnown RBP9.08□□□□□ -0.96
SMARCD1-201ENST00000381513 HSPG2P98160 4391 aa9.05□□□□□ -0.96
SMARCD1-201ENST00000381513 PKHD1L1Q86WI1 4243 aa9.04□□□□□ -0.96
SMARCD1-201ENST00000381513 J3QL48 77 aa8.99□□□□□ -0.97
SMARCD1-201ENST00000381513 KRTAP10-4P60372 401 aaPredicted RBP8.97□□□□□ -0.97
SMARCD1-201ENST00000381513 LRP1Q07954 4544 aaKnown RBP8.96□□□□□ -0.97
SMARCD1-201ENST00000381513 KRTAP21-3Q3LHN1 58 aa8.93□□□□□ -0.98
SMARCD1-201ENST00000381513 FAT3Q8TDW7 4589 aa8.9□□□□□ -0.98
SMARCD1-201ENST00000381513 SEC61BP60468 96 aaKnown RBP8.89□□□□□ -0.99
SMARCD1-201ENST00000381513 KMT2CQ8NEZ4 4911 aaKnown RBP8.86□□□□□ -0.99
SMARCD1-201ENST00000381513 PP632Q6XCG6 107 aa8.85□□□□□ -0.99
SMARCD1-201ENST00000381513 CAMK2N1Q7Z7J9 78 aa8.85□□□□□ -0.99
SMARCD1-201ENST00000381513 LORP23490 312 aaPredicted RBP8.76□□□□□ -1.01
SMARCD1-201ENST00000381513 LPAP08519 4548 aa8.74□□□□□ -1.01
SMARCD1-201ENST00000381513 RYR2Q92736 4967 aa8.64□□□□□ -1.03
SMARCD1-201ENST00000381513 TNXBP22105 4242 aa8.59□□□□□ -1.03
SMARCD1-201ENST00000381513 LRP2P98164 4655 aa8.58□□□□□ -1.04
SMARCD1-201ENST00000381513 A0A1B0GVY2 172 aa8.58□□□□□ -1.04
SMARCD1-201ENST00000381513 RYR3Q15413 4870 aa8.57□□□□□ -1.04
SMARCD1-201ENST00000381513 Q5VSD8 79 aa8.54□□□□□ -1.04
SMARCD1-201ENST00000381513 TNP1P09430 55 aa8.46□□□□□ -1.05
SMARCD1-201ENST00000381513 PRO2289Q9P1D8 64 aa8.45□□□□□ -1.06
SMARCD1-201ENST00000381513 KIAA1109Q2LD37 5005 aa8.4□□□□□ -1.06
SMARCD1-201ENST00000381513 SPRR5A0A1B0GTR4 108 aa8.39□□□□□ -1.07
SMARCD1-201ENST00000381513 EPPK1P58107 5090 aaKnown RBP8.32□□□□□ -1.08
SMARCD1-201ENST00000381513 KRTAP17-1Q9BYP8 105 aa8.29□□□□□ -1.08
SMARCD1-201ENST00000381513 MT1HL1P0DM35 61 aa8.27□□□□□ -1.09
SMARCD1-201ENST00000381513 RYR1P21817 5038 aa8.19□□□□□ -1.1
SMARCD1-201ENST00000381513 KRTAP23-1A1A580 65 aa8.14□□□□□ -1.11
SMARCD1-201ENST00000381513 INE1O15225 51 aa8.14□□□□□ -1.11
SMARCD1-201ENST00000381513 KRTAP4-5Q9BYR2 181 aa8.06□□□□□ -1.12
SMARCD1-201ENST00000381513 KRTAP4-1Q9BYQ7 146 aa8.01□□□□□ -1.13
SMARCD1-201ENST00000381513 ABCA13Q86UQ4 5058 aa7.93□□□□□ -1.14
SMARCD1-201ENST00000381513 LCE3AQ5TA76 89 aa7.89□□□□□ -1.15
SMARCD1-201ENST00000381513 MUC17Q685J3 4493 aa7.89□□□□□ -1.15
SMARCD1-201ENST00000381513 HERC2O95714 4834 aa7.8□□□□□ -1.16
SMARCD1-201ENST00000381513 KRTAP19-2Q3LHN2 52 aa7.75□□□□□ -1.17
SMARCD1-201ENST00000381513 MUC2Q02817 5179 aa7.71□□□□□ -1.18
SMARCD1-201ENST00000381513 BIRC6Q9NR09 4857 aa7.6□□□□□ -1.19
SMARCD1-201ENST00000381513 HERC1Q15751 4861 aa7.59□□□□□ -1.19
SMARCD1-201ENST00000381513 PCLOQ9Y6V0 5065 aa7.59□□□□□ -1.19
SMARCD1-201ENST00000381513 FLGP20930 4061 aaPredicted RBP7.56□□□□□ -1.2
SMARCD1-201ENST00000381513 KRTAP8-1Q8IUC2 63 aa7.52□□□□□ -1.21
SMARCD1-201ENST00000381513 KRTAP12-3P60328 96 aa7.47□□□□□ -1.21
SMARCD1-201ENST00000381513 SPRR2GQ9BYE4 73 aa7.44□□□□□ -1.22
SMARCD1-201ENST00000381513 KRTAP19-1Q8IUB9 90 aa7.44□□□□□ -1.22
SMARCD1-201ENST00000381513 M0R2T5 61 aa7.4□□□□□ -1.23
SMARCD1-201ENST00000381513 KRTAP10-12P60413 245 aa7.35□□□□□ -1.23
SMARCD1-201ENST00000381513 RNF213Q63HN8 5207 aa7.3□□□□□ -1.24
SMARCD1-201ENST00000381513 FAT4Q6V0I7 4981 aa7.29□□□□□ -1.24
SMARCD1-201ENST00000381513 KRTAP10-10P60014 251 aa7.25□□□□□ -1.25
SMARCD1-201ENST00000381513 HMCN2Q8NDA2 5059 aa7.21□□□□□ -1.26
SMARCD1-201ENST00000381513 UBR4Q5T4S7 5183 aa7.2□□□□□ -1.26
SMARCD1-201ENST00000381513 KRTAP10-5P60370 271 aa7.1□□□□□ -1.27
SMARCD1-201ENST00000381513 MT1XP80297 61 aa7.08□□□□□ -1.28
SMARCD1-201ENST00000381513 MT1FP04733 61 aa7.06□□□□□ -1.28
SMARCD1-201ENST00000381513 KRTAP10-7P60409 375 aaPredicted RBP7.06□□□□□ -1.28
SMARCD1-201ENST00000381513 LCE2CQ5TA81 110 aa7.03□□□□□ -1.28
SMARCD1-201ENST00000381513 LCE3CQ5T5A8 94 aa7□□□□□ -1.29
SMARCD1-201ENST00000381513 MT2AP02795 61 aa6.99□□□□□ -1.29
SMARCD1-201ENST00000381513 MT1BP07438 61 aa6.92□□□□□ -1.3
SMARCD1-201ENST00000381513 KRTAP19-8Q3LI54 63 aa6.92□□□□□ -1.3
SMARCD1-201ENST00000381513 KRTAP19-5Q3LI72 72 aa6.9□□□□□ -1.31
SMARCD1-201ENST00000381513 MT1HP80294 61 aa6.87□□□□□ -1.31
SMARCD1-201ENST00000381513 KRTAP9-6A8MVA2 160 aa6.84□□□□□ -1.31
SMARCD1-201ENST00000381513 KRTAP9-8Q9BYQ0 159 aa6.79□□□□□ -1.32
SMARCD1-201ENST00000381513 KRTAP2-3P0C7H8 128 aa6.74□□□□□ -1.33
SMARCD1-201ENST00000381513 KRTAP2-4Q9BYR9 128 aa6.74□□□□□ -1.33
SMARCD1-201ENST00000381513 KRTAP2-1Q9BYU5 128 aa6.74□□□□□ -1.33
SMARCD1-201ENST00000381513 KMT2DO14686 5537 aa6.7□□□□□ -1.34
SMARCD1-201ENST00000381513 KRTAP4-7Q9BYR0 210 aa6.64□□□□□ -1.35
SMARCD1-201ENST00000381513 KRTAP4-8A0A0G2JLE6 195 aa6.54□□□□□ -1.36
SMARCD1-201ENST00000381513 KRTAP4-8Q9BYQ9 185 aa6.54□□□□□ -1.36
SMARCD1-201ENST00000381513 KRTAP9-3Q9BYQ3 159 aa6.44□□□□□ -1.38
SMARCD1-201ENST00000381513 FSIP2Q5CZC0 6907 aa6.42□□□□□ -1.38
SMARCD1-201ENST00000381513 USH2AO75445 5202 aa6.39□□□□□ -1.39
SMARCD1-201ENST00000381513 KRTAP12-4P60329 112 aa6.39□□□□□ -1.39
SMARCD1-201ENST00000381513 KRTAP19-7Q3SYF9 63 aa6.28□□□□□ -1.4
SMARCD1-201ENST00000381513 MT1LQ93083 61 aa6.18□□□□□ -1.42
SMARCD1-201ENST00000381513 CRCT1Q9UGL9 99 aa6.16□□□□□ -1.42
SMARCD1-201ENST00000381513 LCE2BO14633 110 aa6.15□□□□□ -1.42
SMARCD1-201ENST00000381513 LOC100996750A0A140TA64 210 aa6.14□□□□□ -1.43
SMARCD1-201ENST00000381513 LCE2AQ5TA79 106 aaPredicted RBP6.08□□□□□ -1.44
SMARCD1-201ENST00000381513 MT1EP04732 61 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms