RNA–Protein interactions for RNA: ENST00000381254.6

GEN1-202, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GEN1, Length 6,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-202ENST00000381254 PCLOQ9Y6V0 5065 aa2.67□□□□□ -1.98
GEN1-202ENST00000381254 INE1O15225 51 aa2.66□□□□□ -1.98
GEN1-202ENST00000381254 KRTAP12-1P59990 96 aa2.66□□□□□ -1.98
GEN1-202ENST00000381254 LRP1BQ9NZR2 4599 aa2.64□□□□□ -1.99
GEN1-202ENST00000381254 KRTAP19-4Q3LI73 84 aa2.64□□□□□ -1.99
GEN1-202ENST00000381254 TRRAPQ9Y4A5 3859 aa2.64□□□□□ -1.99
GEN1-202ENST00000381254 KRTAP3-1Q9BYR8 98 aa2.64□□□□□ -1.99
GEN1-202ENST00000381254 KRTAP10-6P60371 365 aaPredicted RBP2.64□□□□□ -1.99
GEN1-202ENST00000381254 PRKDCP78527 4128 aaKnown RBP2.63□□□□□ -1.99
GEN1-202ENST00000381254 KRTAP9-7A8MTY7 169 aa2.63□□□□□ -1.99
GEN1-202ENST00000381254 KRTAP3-3Q9BYR6 98 aa2.61□□□□□ -1.99
GEN1-202ENST00000381254 KRTAP3-2Q9BYR7 98 aa2.61□□□□□ -1.99
GEN1-202ENST00000381254 RYR1P21817 5038 aa2.6□□□□□ -1.99
GEN1-202ENST00000381254 DNAH10Q8IVF4 4471 aa2.59□□□□□ -1.99
GEN1-202ENST00000381254 DNAH3Q8TD57 4116 aa2.58□□□□□ -2
GEN1-202ENST00000381254 KMT2CQ8NEZ4 4911 aaKnown RBP2.58□□□□□ -2
GEN1-202ENST00000381254 MT1HP80294 61 aa2.58□□□□□ -2
GEN1-202ENST00000381254 KRTAP12-2P59991 146 aa2.58□□□□□ -2
GEN1-202ENST00000381254 EPPK1P58107 5090 aaKnown RBP2.58□□□□□ -2
GEN1-202ENST00000381254 PLECQ15149 4684 aaKnown RBP2.56□□□□□ -2
GEN1-202ENST00000381254 SACSQ9NZJ4 4579 aa2.55□□□□□ -2
GEN1-202ENST00000381254 DNAH6Q9C0G6 4158 aa2.55□□□□□ -2
GEN1-202ENST00000381254 DYNC1H1Q14204 4646 aaKnown RBP2.55□□□□□ -2
GEN1-202ENST00000381254 KIAA1109Q2LD37 5005 aa2.54□□□□□ -2
GEN1-202ENST00000381254 KRTAP20-1Q3LI63 56 aa2.54□□□□□ -2
GEN1-202ENST00000381254 ABCA13Q86UQ4 5058 aa2.53□□□□□ -2
GEN1-202ENST00000381254 HYDINQ4G0P3 5121 aa2.53□□□□□ -2
GEN1-202ENST00000381254 ZNF469Q96JG9 3925 aaPredicted RBP2.52□□□□□ -2.01
GEN1-202ENST00000381254 PKHD1L1Q86WI1 4243 aa2.52□□□□□ -2.01
GEN1-202ENST00000381254 KRTAP15-1Q3LI76 137 aa2.52□□□□□ -2.01
GEN1-202ENST00000381254 FAT2Q9NYQ8 4349 aa2.51□□□□□ -2.01
GEN1-202ENST00000381254 VPS13CQ709C8 3753 aa2.5□□□□□ -2.01
GEN1-202ENST00000381254 DNAH5Q8TE73 4624 aa2.49□□□□□ -2.01
GEN1-202ENST00000381254 DNAH17Q9UFH2 4485 aa2.49□□□□□ -2.01
GEN1-202ENST00000381254 SRRM2Q9UQ35 2752 aaKnown RBP2.49□□□□□ -2.01
GEN1-202ENST00000381254 LCE2CQ5TA81 110 aa2.49□□□□□ -2.01
GEN1-202ENST00000381254 KRTAP8-1Q8IUC2 63 aa2.48□□□□□ -2.01
GEN1-202ENST00000381254 SPRR2EP22531 72 aa2.46□□□□□ -2.01
GEN1-202ENST00000381254 SPRR2BP35325 72 aa2.46□□□□□ -2.01
GEN1-202ENST00000381254 SPRR2AP35326 72 aa2.46□□□□□ -2.01
GEN1-202ENST00000381254 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.46□□□□□ -2.02
GEN1-202ENST00000381254 HERC1Q15751 4861 aa2.44□□□□□ -2.02
GEN1-202ENST00000381254 VPS13DQ5THJ4 4388 aa2.44□□□□□ -2.02
GEN1-202ENST00000381254 KRTAP19-1Q8IUB9 90 aa2.44□□□□□ -2.02
GEN1-202ENST00000381254 FAT3Q8TDW7 4589 aa2.44□□□□□ -2.02
GEN1-202ENST00000381254 CMYA5Q8N3K9 4069 aa2.43□□□□□ -2.02
GEN1-202ENST00000381254 LCE2AQ5TA79 106 aaPredicted RBP2.42□□□□□ -2.02
GEN1-202ENST00000381254 SPRR2FQ96RM1 72 aa2.42□□□□□ -2.02
GEN1-202ENST00000381254 DNAH2Q9P225 4427 aa2.42□□□□□ -2.02
GEN1-202ENST00000381254 SPRR2DP22532 72 aa2.41□□□□□ -2.02
GEN1-202ENST00000381254 DNAH7Q8WXX0 4024 aa2.41□□□□□ -2.02
GEN1-202ENST00000381254 CUBNO60494 3623 aa2.4□□□□□ -2.02
GEN1-202ENST00000381254 STARD9Q9P2P6 4700 aa2.39□□□□□ -2.03
GEN1-202ENST00000381254 KRTAP10-12P60413 245 aa2.39□□□□□ -2.03
GEN1-202ENST00000381254 KRTAP6-3Q3LI67 103 aa2.39□□□□□ -2.03
GEN1-202ENST00000381254 KMT2AQ03164 3969 aa2.39□□□□□ -2.03
GEN1-202ENST00000381254 MT2AP02795 61 aa2.38□□□□□ -2.03
GEN1-202ENST00000381254 KRTAP4-1Q9BYQ7 146 aa2.38□□□□□ -2.03
GEN1-202ENST00000381254 HSPG2P98160 4391 aa2.38□□□□□ -2.03
GEN1-202ENST00000381254 KRTAP2-3P0C7H8 128 aa2.36□□□□□ -2.03
GEN1-202ENST00000381254 KRTAP12-3P60328 96 aa2.36□□□□□ -2.03
GEN1-202ENST00000381254 KRTAP2-4Q9BYR9 128 aa2.36□□□□□ -2.03
GEN1-202ENST00000381254 HECTD4Q9Y4D8 3996 aa2.36□□□□□ -2.03
GEN1-202ENST00000381254 MYCBP2O75592 4640 aa2.35□□□□□ -2.03
GEN1-202ENST00000381254 VPS13BQ7Z7G8 4022 aa2.34□□□□□ -2.03
GEN1-202ENST00000381254 SVEP1Q4LDE5 3571 aa2.34□□□□□ -2.03
GEN1-202ENST00000381254 FAT1Q14517 4588 aa2.34□□□□□ -2.04
GEN1-202ENST00000381254 DNAH8Q96JB1 4490 aa2.33□□□□□ -2.04
GEN1-202ENST00000381254 LCE2BO14633 110 aa2.32□□□□□ -2.04
GEN1-202ENST00000381254 FRAS1Q86XX4 4008 aa2.31□□□□□ -2.04
GEN1-202ENST00000381254 PKHD1P08F94 4074 aa2.31□□□□□ -2.04
GEN1-202ENST00000381254 SPRR2GQ9BYE4 73 aa2.31□□□□□ -2.04
GEN1-202ENST00000381254 UBR4Q5T4S7 5183 aa2.3□□□□□ -2.04
GEN1-202ENST00000381254 APOBP04114 4563 aaKnown RBP2.3□□□□□ -2.04
GEN1-202ENST00000381254 MT1FP04733 61 aa2.3□□□□□ -2.04
GEN1-202ENST00000381254 RNF213Q63HN8 5207 aa2.29□□□□□ -2.04
GEN1-202ENST00000381254 HMCN2Q8NDA2 5059 aa2.28□□□□□ -2.04
GEN1-202ENST00000381254 KRTAP19-6Q3LI70 58 aa2.27□□□□□ -2.05
GEN1-202ENST00000381254 SPRR5A0A1B0GTR4 108 aa2.26□□□□□ -2.05
GEN1-202ENST00000381254 CSMD3Q7Z407 3707 aa2.26□□□□□ -2.05
GEN1-202ENST00000381254 LYSTQ99698 3801 aa2.25□□□□□ -2.05
GEN1-202ENST00000381254 KRTAP2-2Q9BYT5 123 aa2.24□□□□□ -2.05
GEN1-202ENST00000381254 KRTAP2-1Q9BYU5 128 aa2.24□□□□□ -2.05
GEN1-202ENST00000381254 KRTAP10-7P60409 375 aaPredicted RBP2.23□□□□□ -2.05
GEN1-202ENST00000381254 KRTAP19-8Q3LI54 63 aa2.21□□□□□ -2.06
GEN1-202ENST00000381254 LCE3AQ5TA76 89 aa2.21□□□□□ -2.06
GEN1-202ENST00000381254 LCE3BQ5TA77 95 aa2.21□□□□□ -2.06
GEN1-202ENST00000381254 KRTAP10-5P60370 271 aa2.2□□□□□ -2.06
GEN1-202ENST00000381254 KRTAP9-8Q9BYQ0 159 aa2.19□□□□□ -2.06
GEN1-202ENST00000381254 FAT4Q6V0I7 4981 aa2.19□□□□□ -2.06
GEN1-202ENST00000381254 KRTAP9-3Q9BYQ3 159 aa2.19□□□□□ -2.06
GEN1-202ENST00000381254 PKD1P98161 4303 aa2.16□□□□□ -2.06
GEN1-202ENST00000381254 MUC17Q685J3 4493 aa2.15□□□□□ -2.07
GEN1-202ENST00000381254 LRP2P98164 4655 aa2.14□□□□□ -2.07
GEN1-202ENST00000381254 LRP1Q07954 4544 aaKnown RBP2.11□□□□□ -2.07
GEN1-202ENST00000381254 KRTAP12-4P60329 112 aa2.1□□□□□ -2.07
GEN1-202ENST00000381254 SYNE2Q8WXH0 6885 aaKnown RBP2.09□□□□□ -2.07
GEN1-202ENST00000381254 LCE3CQ5T5A8 94 aa2.09□□□□□ -2.08
GEN1-202ENST00000381254 LCE1AQ5T7P2 110 aa2.06□□□□□ -2.08
GEN1-202ENST00000381254 MT4P47944 62 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms