RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 KIAA1109Q2LD37 5005 aa5.82□□□□□ -1.48
DNMT3A-203ENST00000380746 KRTAP21-3Q3LHN1 58 aa5.81□□□□□ -1.48
DNMT3A-203ENST00000380746 K7ERS5 55 aa5.8□□□□□ -1.48
DNMT3A-203ENST00000380746 KRTAP3-1Q9BYR8 98 aa5.78□□□□□ -1.48
DNMT3A-203ENST00000380746 COX6B2Q6YFQ2 88 aa5.78□□□□□ -1.48
DNMT3A-203ENST00000380746 KRTAP10-4P60372 401 aaPredicted RBP5.77□□□□□ -1.49
DNMT3A-203ENST00000380746 RPS29P62273 56 aaKnown RBP5.77□□□□□ -1.49
DNMT3A-203ENST00000380746 J3QL48 77 aa5.76□□□□□ -1.49
DNMT3A-203ENST00000380746 SEC61BP60468 96 aaKnown RBP5.75□□□□□ -1.49
DNMT3A-203ENST00000380746 RYR3Q15413 4870 aa5.72□□□□□ -1.49
DNMT3A-203ENST00000380746 RYR1P21817 5038 aa5.72□□□□□ -1.49
DNMT3A-203ENST00000380746 H1FX-AS1Q4G0G2 97 aa5.72□□□□□ -1.49
DNMT3A-203ENST00000380746 XP32Q5T750 250 aa5.72□□□□□ -1.49
DNMT3A-203ENST00000380746 H0YAA0 97 aa5.71□□□□□ -1.49
DNMT3A-203ENST00000380746 KRTAP10-8P60410 259 aa5.71□□□□□ -1.5
DNMT3A-203ENST00000380746 S4R3F8 94 aa5.7□□□□□ -1.5
DNMT3A-203ENST00000380746 RYR2Q92736 4967 aa5.7□□□□□ -1.5
DNMT3A-203ENST00000380746 RPL37P61927 97 aaKnown RBP5.67□□□□□ -1.5
DNMT3A-203ENST00000380746 KRTAP17-1Q9BYP8 105 aa5.66□□□□□ -1.5
DNMT3A-203ENST00000380746 KRTAP4-5Q9BYR2 181 aa5.61□□□□□ -1.51
DNMT3A-203ENST00000380746 HSPG2P98160 4391 aa5.58□□□□□ -1.52
DNMT3A-203ENST00000380746 LRP2P98164 4655 aa5.57□□□□□ -1.52
DNMT3A-203ENST00000380746 MT1HL1P0DM35 61 aa5.54□□□□□ -1.52
DNMT3A-203ENST00000380746 LCE2DQ5TA82 110 aaPredicted RBP5.54□□□□□ -1.52
DNMT3A-203ENST00000380746 PKHD1L1Q86WI1 4243 aa5.53□□□□□ -1.52
DNMT3A-203ENST00000380746 KRTAP13-4Q3LI77 160 aa5.51□□□□□ -1.53
DNMT3A-203ENST00000380746 EPPK1P58107 5090 aaKnown RBP5.51□□□□□ -1.53
DNMT3A-203ENST00000380746 LPAP08519 4548 aa5.5□□□□□ -1.53
DNMT3A-203ENST00000380746 C10orf95Q9H7T3 257 aa5.49□□□□□ -1.53
DNMT3A-203ENST00000380746 KRTAP3-3Q9BYR6 98 aa5.48□□□□□ -1.53
DNMT3A-203ENST00000380746 KRTAP15-1Q3LI76 137 aa5.47□□□□□ -1.53
DNMT3A-203ENST00000380746 M0QZ58 72 aa5.47□□□□□ -1.53
DNMT3A-203ENST00000380746 KRTAP10-6P60371 365 aaPredicted RBP5.45□□□□□ -1.54
DNMT3A-203ENST00000380746 R4GN34 69 aa5.45□□□□□ -1.54
DNMT3A-203ENST00000380746 ABCA13Q86UQ4 5058 aa5.41□□□□□ -1.54
DNMT3A-203ENST00000380746 TNXBP22105 4242 aa5.39□□□□□ -1.55
DNMT3A-203ENST00000380746 TPRXLQ17RH7 258 aa5.38□□□□□ -1.55
DNMT3A-203ENST00000380746 KRTAP3-2Q9BYR7 98 aa5.38□□□□□ -1.55
DNMT3A-203ENST00000380746 KRTAP12-2P59991 146 aa5.37□□□□□ -1.55
DNMT3A-203ENST00000380746 MUC2Q02817 5179 aa5.34□□□□□ -1.55
DNMT3A-203ENST00000380746 HERC2O95714 4834 aa5.31□□□□□ -1.56
DNMT3A-203ENST00000380746 CAMK2N1Q7Z7J9 78 aa5.3□□□□□ -1.56
DNMT3A-203ENST00000380746 M0R2T5 61 aa5.28□□□□□ -1.56
DNMT3A-203ENST00000380746 KRTAP12-1P59990 96 aa5.25□□□□□ -1.57
DNMT3A-203ENST00000380746 KRTAP4-1Q9BYQ7 146 aa5.24□□□□□ -1.57
DNMT3A-203ENST00000380746 LORP23490 312 aaPredicted RBP5.23□□□□□ -1.57
DNMT3A-203ENST00000380746 HERC1Q15751 4861 aa5.15□□□□□ -1.58
DNMT3A-203ENST00000380746 FAT4Q6V0I7 4981 aa5.09□□□□□ -1.59
DNMT3A-203ENST00000380746 RNF213Q63HN8 5207 aa5.09□□□□□ -1.59
DNMT3A-203ENST00000380746 PLAC4Q8WY50 150 aa5.03□□□□□ -1.6
DNMT3A-203ENST00000380746 PCLOQ9Y6V0 5065 aa4.97□□□□□ -1.61
DNMT3A-203ENST00000380746 UBR4Q5T4S7 5183 aa4.94□□□□□ -1.62
DNMT3A-203ENST00000380746 BIRC6Q9NR09 4857 aa4.93□□□□□ -1.62
DNMT3A-203ENST00000380746 KRTAP10-10P60014 251 aa4.93□□□□□ -1.62
DNMT3A-203ENST00000380746 MUC17Q685J3 4493 aa4.87□□□□□ -1.63
DNMT3A-203ENST00000380746 TNP1P09430 55 aa4.85□□□□□ -1.63
DNMT3A-203ENST00000380746 PRO2289Q9P1D8 64 aa4.84□□□□□ -1.63
DNMT3A-203ENST00000380746 HMCN2Q8NDA2 5059 aa4.78□□□□□ -1.64
DNMT3A-203ENST00000380746 KRTAP19-2Q3LHN2 52 aa4.77□□□□□ -1.65
DNMT3A-203ENST00000380746 FLGP20930 4061 aaPredicted RBP4.72□□□□□ -1.65
DNMT3A-203ENST00000380746 MT1HP80294 61 aa4.68□□□□□ -1.66
DNMT3A-203ENST00000380746 LCE2BO14633 110 aa4.67□□□□□ -1.66
DNMT3A-203ENST00000380746 PP632Q6XCG6 107 aa4.66□□□□□ -1.66
DNMT3A-203ENST00000380746 LCE2CQ5TA81 110 aa4.66□□□□□ -1.66
DNMT3A-203ENST00000380746 MT1FP04733 61 aa4.64□□□□□ -1.67
DNMT3A-203ENST00000380746 FSIP2Q5CZC0 6907 aa4.62□□□□□ -1.67
DNMT3A-203ENST00000380746 MT2AP02795 61 aa4.6□□□□□ -1.67
DNMT3A-203ENST00000380746 KRTAP19-1Q8IUB9 90 aa4.59□□□□□ -1.67
DNMT3A-203ENST00000380746 LCE3AQ5TA76 89 aa4.57□□□□□ -1.68
DNMT3A-203ENST00000380746 USH2AO75445 5202 aa4.56□□□□□ -1.68
DNMT3A-203ENST00000380746 KRTAP23-1A1A580 65 aa4.53□□□□□ -1.68
DNMT3A-203ENST00000380746 SPRR2GQ9BYE4 73 aa4.51□□□□□ -1.69
DNMT3A-203ENST00000380746 INE1O15225 51 aa4.5□□□□□ -1.69
DNMT3A-203ENST00000380746 LOC100996750A0A140TA64 210 aa4.5□□□□□ -1.69
DNMT3A-203ENST00000380746 KRTAP4-6Q9BYQ5 205 aa4.5□□□□□ -1.69
DNMT3A-203ENST00000380746 KRTAP9-8Q9BYQ0 159 aa4.47□□□□□ -1.69
DNMT3A-203ENST00000380746 KMT2DO14686 5537 aa4.41□□□□□ -1.7
DNMT3A-203ENST00000380746 KRTAP10-12P60413 245 aa4.39□□□□□ -1.71
DNMT3A-203ENST00000380746 MT1BP07438 61 aa4.36□□□□□ -1.71
DNMT3A-203ENST00000380746 KRTAP10-7P60409 375 aaPredicted RBP4.35□□□□□ -1.71
DNMT3A-203ENST00000380746 KRTAP12-3P60328 96 aa4.34□□□□□ -1.72
DNMT3A-203ENST00000380746 MT1XP80297 61 aa4.33□□□□□ -1.72
DNMT3A-203ENST00000380746 KRTAP10-5P60370 271 aa4.32□□□□□ -1.72
DNMT3A-203ENST00000380746 LCE2AQ5TA79 106 aaPredicted RBP4.28□□□□□ -1.72
DNMT3A-203ENST00000380746 KRTAP9-3Q9BYQ3 159 aa4.27□□□□□ -1.73
DNMT3A-203ENST00000380746 KRTAP19-8Q3LI54 63 aa4.25□□□□□ -1.73
DNMT3A-203ENST00000380746 KRTAP4-8A0A0G2JLE6 195 aa4.24□□□□□ -1.73
DNMT3A-203ENST00000380746 KRTAP4-8Q9BYQ9 185 aa4.24□□□□□ -1.73
DNMT3A-203ENST00000380746 KRTAP19-5Q3LI72 72 aa4.18□□□□□ -1.74
DNMT3A-203ENST00000380746 KRTAP8-1Q8IUC2 63 aa4.17□□□□□ -1.74
DNMT3A-203ENST00000380746 SPRR5A0A1B0GTR4 108 aa4.16□□□□□ -1.74
DNMT3A-203ENST00000380746 DSTQ03001 7570 aaKnown RBP4.09□□□□□ -1.76
DNMT3A-203ENST00000380746 CRCT1Q9UGL9 99 aa4.08□□□□□ -1.76
DNMT3A-203ENST00000380746 KRTAP4-7Q9BYR0 210 aa4.07□□□□□ -1.76
DNMT3A-203ENST00000380746 OBSCNQ5VST9 7968 aa4□□□□□ -1.77
DNMT3A-203ENST00000380746 LCE3BQ5TA77 95 aa3.98□□□□□ -1.77
DNMT3A-203ENST00000380746 FCGBPQ9Y6R7 5405 aaPredicted RBP3.98□□□□□ -1.77
DNMT3A-203ENST00000380746 LCE3CQ5T5A8 94 aa3.97□□□□□ -1.77
DNMT3A-203ENST00000380746 MUC12Q9UKN1 5478 aa3.95□□□□□ -1.78
DNMT3A-203ENST00000380746 SSPOA2VEC9 5147 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms