RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 XP32Q5T750 250 aa6.7□□□□□ -1.34
USP11-204ENST00000377107 RPL37P61927 97 aaKnown RBP6.68□□□□□ -1.34
USP11-204ENST00000377107 S4R3F8 94 aa6.68□□□□□ -1.34
USP11-204ENST00000377107 RYR2Q92736 4967 aa6.67□□□□□ -1.34
USP11-204ENST00000377107 FAT3Q8TDW7 4589 aa6.66□□□□□ -1.34
USP11-204ENST00000377107 KIAA1109Q2LD37 5005 aa6.64□□□□□ -1.35
USP11-204ENST00000377107 PKHD1L1Q86WI1 4243 aa6.62□□□□□ -1.35
USP11-204ENST00000377107 KRTAP17-1Q9BYP8 105 aa6.6□□□□□ -1.35
USP11-204ENST00000377107 HSPG2P98160 4391 aa6.6□□□□□ -1.35
USP11-204ENST00000377107 SPINT4Q6UDR6 99 aa6.59□□□□□ -1.35
USP11-204ENST00000377107 P0C880 135 aa6.59□□□□□ -1.36
USP11-204ENST00000377107 KRTAP13-4Q3LI77 160 aa6.56□□□□□ -1.36
USP11-204ENST00000377107 RYR3Q15413 4870 aa6.56□□□□□ -1.36
USP11-204ENST00000377107 KRTAP3-3Q9BYR6 98 aa6.55□□□□□ -1.36
USP11-204ENST00000377107 KRTAP10-6P60371 365 aaPredicted RBP6.53□□□□□ -1.36
USP11-204ENST00000377107 KRTAP25-1Q3LHN0 102 aa6.53□□□□□ -1.36
USP11-204ENST00000377107 RYR1P21817 5038 aa6.52□□□□□ -1.37
USP11-204ENST00000377107 MT1HL1P0DM35 61 aa6.5□□□□□ -1.37
USP11-204ENST00000377107 ROMO1P60602 79 aa6.48□□□□□ -1.37
USP11-204ENST00000377107 LRP2P98164 4655 aa6.47□□□□□ -1.37
USP11-204ENST00000377107 TNXBP22105 4242 aa6.47□□□□□ -1.37
USP11-204ENST00000377107 KRTAP3-2Q9BYR7 98 aa6.45□□□□□ -1.38
USP11-204ENST00000377107 C10orf95Q9H7T3 257 aa6.45□□□□□ -1.38
USP11-204ENST00000377107 LPAP08519 4548 aa6.43□□□□□ -1.38
USP11-204ENST00000377107 KRTAP4-5Q9BYR2 181 aa6.42□□□□□ -1.38
USP11-204ENST00000377107 J3QL48 77 aa6.41□□□□□ -1.38
USP11-204ENST00000377107 KRTAP12-2P59991 146 aa6.38□□□□□ -1.39
USP11-204ENST00000377107 M0QZ58 72 aa6.35□□□□□ -1.39
USP11-204ENST00000377107 EPPK1P58107 5090 aaKnown RBP6.33□□□□□ -1.4
USP11-204ENST00000377107 TPRXLQ17RH7 258 aa6.33□□□□□ -1.4
USP11-204ENST00000377107 R4GN34 69 aa6.32□□□□□ -1.4
USP11-204ENST00000377107 ABCA13Q86UQ4 5058 aa6.29□□□□□ -1.4
USP11-204ENST00000377107 H3BS24 57 aa6.27□□□□□ -1.41
USP11-204ENST00000377107 KRTAP12-1P59990 96 aa6.26□□□□□ -1.41
USP11-204ENST00000377107 SEC61BP60468 96 aaKnown RBP6.24□□□□□ -1.41
USP11-204ENST00000377107 LORP23490 312 aaPredicted RBP6.14□□□□□ -1.43
USP11-204ENST00000377107 KRTAP4-1Q9BYQ7 146 aa6.12□□□□□ -1.43
USP11-204ENST00000377107 MUC2Q02817 5179 aa6.11□□□□□ -1.43
USP11-204ENST00000377107 CAMK2N1Q7Z7J9 78 aa6.09□□□□□ -1.43
USP11-204ENST00000377107 HERC2O95714 4834 aa6.05□□□□□ -1.44
USP11-204ENST00000377107 NDUFAF8A1L188 74 aa6.02□□□□□ -1.45
USP11-204ENST00000377107 M0R2T5 61 aa5.91□□□□□ -1.46
USP11-204ENST00000377107 MUC17Q685J3 4493 aa5.85□□□□□ -1.47
USP11-204ENST00000377107 KRTAP15-1Q3LI76 137 aa5.85□□□□□ -1.47
USP11-204ENST00000377107 HERC1Q15751 4861 aa5.85□□□□□ -1.47
USP11-204ENST00000377107 FAT4Q6V0I7 4981 aa5.8□□□□□ -1.48
USP11-204ENST00000377107 PLAC4Q8WY50 150 aa5.79□□□□□ -1.48
USP11-204ENST00000377107 KRTAP19-2Q3LHN2 52 aa5.75□□□□□ -1.49
USP11-204ENST00000377107 RNF213Q63HN8 5207 aa5.73□□□□□ -1.49
USP11-204ENST00000377107 TNP1P09430 55 aa5.68□□□□□ -1.5
USP11-204ENST00000377107 PCLOQ9Y6V0 5065 aa5.68□□□□□ -1.5
USP11-204ENST00000377107 LUZP6Q538Z0 58 aa5.65□□□□□ -1.5
USP11-204ENST00000377107 BIRC6Q9NR09 4857 aa5.65□□□□□ -1.51
USP11-204ENST00000377107 FLGP20930 4061 aaPredicted RBP5.63□□□□□ -1.51
USP11-204ENST00000377107 KRTAP10-10P60014 251 aa5.62□□□□□ -1.51
USP11-204ENST00000377107 PP632Q6XCG6 107 aa5.6□□□□□ -1.51
USP11-204ENST00000377107 UBR4Q5T4S7 5183 aa5.58□□□□□ -1.52
USP11-204ENST00000377107 HMCN2Q8NDA2 5059 aa5.54□□□□□ -1.52
USP11-204ENST00000377107 LCE2CQ5TA81 110 aa5.51□□□□□ -1.53
USP11-204ENST00000377107 MT1HP80294 61 aa5.46□□□□□ -1.54
USP11-204ENST00000377107 KRTAP19-1Q8IUB9 90 aa5.44□□□□□ -1.54
USP11-204ENST00000377107 MT1FP04733 61 aa5.41□□□□□ -1.54
USP11-204ENST00000377107 MT2AP02795 61 aa5.39□□□□□ -1.55
USP11-204ENST00000377107 SPRR2GQ9BYE4 73 aa5.38□□□□□ -1.55
USP11-204ENST00000377107 LCE3AQ5TA76 89 aa5.37□□□□□ -1.55
USP11-204ENST00000377107 A0A0A0MQY5 61 aa5.29□□□□□ -1.56
USP11-204ENST00000377107 KRTAP9-8Q9BYQ0 159 aa5.27□□□□□ -1.57
USP11-204ENST00000377107 KRTAP23-1A1A580 65 aa5.18□□□□□ -1.58
USP11-204ENST00000377107 MT1BP07438 61 aa5.15□□□□□ -1.58
USP11-204ENST00000377107 USH2AO75445 5202 aa5.14□□□□□ -1.59
USP11-204ENST00000377107 KRTAP10-12P60413 245 aa5.14□□□□□ -1.59
USP11-204ENST00000377107 KRTAP10-5P60370 271 aa5.13□□□□□ -1.59
USP11-204ENST00000377107 MT1XP80297 61 aa5.13□□□□□ -1.59
USP11-204ENST00000377107 KRTAP10-7P60409 375 aaPredicted RBP5.1□□□□□ -1.59
USP11-204ENST00000377107 KRTAP12-3P60328 96 aa5.1□□□□□ -1.59
USP11-204ENST00000377107 KRTAP19-8Q3LI54 63 aa5.09□□□□□ -1.59
USP11-204ENST00000377107 PRO2289Q9P1D8 64 aa5.05□□□□□ -1.6
USP11-204ENST00000377107 SPRR5A0A1B0GTR4 108 aa5.03□□□□□ -1.6
USP11-204ENST00000377107 KRTAP9-3Q9BYQ3 159 aa5.03□□□□□ -1.6
USP11-204ENST00000377107 KMT2DO14686 5537 aa5.03□□□□□ -1.6
USP11-204ENST00000377107 KRTAP8-1Q8IUC2 63 aa5.02□□□□□ -1.61
USP11-204ENST00000377107 FSIP2Q5CZC0 6907 aa4.98□□□□□ -1.61
USP11-204ENST00000377107 LCE2BO14633 110 aa4.93□□□□□ -1.62
USP11-204ENST00000377107 KRTAP4-8A0A0G2JLE6 195 aa4.89□□□□□ -1.63
USP11-204ENST00000377107 KRTAP19-5Q3LI72 72 aa4.89□□□□□ -1.63
USP11-204ENST00000377107 KRTAP4-8Q9BYQ9 185 aa4.89□□□□□ -1.63
USP11-204ENST00000377107 LCE3CQ5T5A8 94 aa4.72□□□□□ -1.65
USP11-204ENST00000377107 KRTAP4-7Q9BYR0 210 aa4.71□□□□□ -1.65
USP11-204ENST00000377107 LCE2AQ5TA79 106 aaPredicted RBP4.68□□□□□ -1.66
USP11-204ENST00000377107 KRTAP9-6A8MVA2 160 aa4.56□□□□□ -1.68
USP11-204ENST00000377107 DSTQ03001 7570 aaKnown RBP4.55□□□□□ -1.68
USP11-204ENST00000377107 CRCT1Q9UGL9 99 aa4.55□□□□□ -1.68
USP11-204ENST00000377107 INE1O15225 51 aa4.54□□□□□ -1.68
USP11-204ENST00000377107 KRTAP19-7Q3SYF9 63 aa4.54□□□□□ -1.68
USP11-204ENST00000377107 SSPOA2VEC9 5147 aa4.52□□□□□ -1.69
USP11-204ENST00000377107 LCE2DQ5TA82 110 aaPredicted RBP4.48□□□□□ -1.69
USP11-204ENST00000377107 MUC12Q9UKN1 5478 aa4.45□□□□□ -1.7
USP11-204ENST00000377107 MT1LQ93083 61 aa4.44□□□□□ -1.7
USP11-204ENST00000377107 MT1EP04732 61 aa4.43□□□□□ -1.7
USP11-204ENST00000377107 KRTAP4-3Q9BYR4 195 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms