RNA–Protein interactions for RNA: ENST00000375669.7

TUBGCP3-202, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-202ENST00000375669 A0A0D9SG42 100 aa9.38□□□□□ -0.91
TUBGCP3-202ENST00000375669 C10orf95Q9H7T3 257 aa9.35□□□□□ -0.91
TUBGCP3-202ENST00000375669 LRP1Q07954 4544 aaKnown RBP9.35□□□□□ -0.91
TUBGCP3-202ENST00000375669 KRTAP13-4Q3LI77 160 aa9.34□□□□□ -0.91
TUBGCP3-202ENST00000375669 KRTAP10-6P60371 365 aaPredicted RBP9.33□□□□□ -0.92
TUBGCP3-202ENST00000375669 HSPG2P98160 4391 aa9.3□□□□□ -0.92
TUBGCP3-202ENST00000375669 PKHD1L1Q86WI1 4243 aa9.3□□□□□ -0.92
TUBGCP3-202ENST00000375669 APOBP04114 4563 aaKnown RBP9.26□□□□□ -0.93
TUBGCP3-202ENST00000375669 KRTAP3-2Q9BYR7 98 aa9.21□□□□□ -0.93
TUBGCP3-202ENST00000375669 KRTAP10-4P60372 401 aaPredicted RBP9.2□□□□□ -0.94
TUBGCP3-202ENST00000375669 KRTAP3-3Q9BYR6 98 aa9.2□□□□□ -0.94
TUBGCP3-202ENST00000375669 KRTAP10-8P60410 259 aa9.18□□□□□ -0.94
TUBGCP3-202ENST00000375669 LPAP08519 4548 aa9.17□□□□□ -0.94
TUBGCP3-202ENST00000375669 S4R3F8 94 aa9.16□□□□□ -0.94
TUBGCP3-202ENST00000375669 FAT3Q8TDW7 4589 aa9.13□□□□□ -0.95
TUBGCP3-202ENST00000375669 KRTAP12-2P59991 146 aa9.1□□□□□ -0.95
TUBGCP3-202ENST00000375669 KMT2CQ8NEZ4 4911 aaKnown RBP9.09□□□□□ -0.95
TUBGCP3-202ENST00000375669 TNXBP22105 4242 aa9.06□□□□□ -0.96
TUBGCP3-202ENST00000375669 A0A1B0GVY2 172 aa9.01□□□□□ -0.97
TUBGCP3-202ENST00000375669 XP32Q5T750 250 aa8.99□□□□□ -0.97
TUBGCP3-202ENST00000375669 KRTAP12-1P59990 96 aa8.98□□□□□ -0.97
TUBGCP3-202ENST00000375669 KRTAP21-3Q3LHN1 58 aa8.98□□□□□ -0.97
TUBGCP3-202ENST00000375669 A0A0A0MQY5 61 aa8.9□□□□□ -0.98
TUBGCP3-202ENST00000375669 RYR2Q92736 4967 aa8.9□□□□□ -0.98
TUBGCP3-202ENST00000375669 LRP2P98164 4655 aa8.9□□□□□ -0.99
TUBGCP3-202ENST00000375669 Q5VSD8 79 aa8.79□□□□□ -1
TUBGCP3-202ENST00000375669 KRTAP17-1Q9BYP8 105 aa8.78□□□□□ -1
TUBGCP3-202ENST00000375669 RYR1P21817 5038 aa8.76□□□□□ -1.01
TUBGCP3-202ENST00000375669 M0QZ58 72 aa8.75□□□□□ -1.01
TUBGCP3-202ENST00000375669 KIAA1109Q2LD37 5005 aa8.73□□□□□ -1.01
TUBGCP3-202ENST00000375669 LUZP6Q538Z0 58 aa8.71□□□□□ -1.01
TUBGCP3-202ENST00000375669 PLAC4Q8WY50 150 aa8.67□□□□□ -1.02
TUBGCP3-202ENST00000375669 ABCA13Q86UQ4 5058 aa8.67□□□□□ -1.02
TUBGCP3-202ENST00000375669 RYR3Q15413 4870 aa8.65□□□□□ -1.02
TUBGCP3-202ENST00000375669 MT1HL1P0DM35 61 aa8.55□□□□□ -1.04
TUBGCP3-202ENST00000375669 LORP23490 312 aaPredicted RBP8.47□□□□□ -1.05
TUBGCP3-202ENST00000375669 R4GN34 69 aa8.47□□□□□ -1.05
TUBGCP3-202ENST00000375669 MUC2Q02817 5179 aa8.44□□□□□ -1.06
TUBGCP3-202ENST00000375669 EPPK1P58107 5090 aaKnown RBP8.38□□□□□ -1.07
TUBGCP3-202ENST00000375669 PP632Q6XCG6 107 aa8.28□□□□□ -1.08
TUBGCP3-202ENST00000375669 KRTAP4-5Q9BYR2 181 aa8.23□□□□□ -1.09
TUBGCP3-202ENST00000375669 MUC17Q685J3 4493 aa8.22□□□□□ -1.09
TUBGCP3-202ENST00000375669 KRTAP4-1Q9BYQ7 146 aa8.21□□□□□ -1.1
TUBGCP3-202ENST00000375669 CAMK2N1Q7Z7J9 78 aa8.11□□□□□ -1.11
TUBGCP3-202ENST00000375669 SEC61BP60468 96 aaKnown RBP8.01□□□□□ -1.13
TUBGCP3-202ENST00000375669 PCLOQ9Y6V0 5065 aa7.97□□□□□ -1.13
TUBGCP3-202ENST00000375669 SPRR5A0A1B0GTR4 108 aa7.96□□□□□ -1.13
TUBGCP3-202ENST00000375669 FAT4Q6V0I7 4981 aa7.92□□□□□ -1.14
TUBGCP3-202ENST00000375669 KRTAP19-2Q3LHN2 52 aa7.9□□□□□ -1.14
TUBGCP3-202ENST00000375669 HERC2O95714 4834 aa7.87□□□□□ -1.15
TUBGCP3-202ENST00000375669 TNP1P09430 55 aa7.84□□□□□ -1.15
TUBGCP3-202ENST00000375669 KRTAP23-1A1A580 65 aa7.84□□□□□ -1.15
TUBGCP3-202ENST00000375669 J3QL48 77 aa7.84□□□□□ -1.15
TUBGCP3-202ENST00000375669 FLGP20930 4061 aaPredicted RBP7.76□□□□□ -1.17
TUBGCP3-202ENST00000375669 HERC1Q15751 4861 aa7.71□□□□□ -1.17
TUBGCP3-202ENST00000375669 PRO2289Q9P1D8 64 aa7.7□□□□□ -1.18
TUBGCP3-202ENST00000375669 RNF213Q63HN8 5207 aa7.63□□□□□ -1.19
TUBGCP3-202ENST00000375669 BIRC6Q9NR09 4857 aa7.51□□□□□ -1.21
TUBGCP3-202ENST00000375669 INE1O15225 51 aa7.5□□□□□ -1.21
TUBGCP3-202ENST00000375669 HMCN2Q8NDA2 5059 aa7.49□□□□□ -1.21
TUBGCP3-202ENST00000375669 LCE3AQ5TA76 89 aa7.4□□□□□ -1.22
TUBGCP3-202ENST00000375669 M0R2T5 61 aa7.4□□□□□ -1.23
TUBGCP3-202ENST00000375669 UBR4Q5T4S7 5183 aa7.4□□□□□ -1.23
TUBGCP3-202ENST00000375669 KRTAP19-1Q8IUB9 90 aa7.39□□□□□ -1.23
TUBGCP3-202ENST00000375669 LCE2CQ5TA81 110 aa7.36□□□□□ -1.23
TUBGCP3-202ENST00000375669 SPRR2GQ9BYE4 73 aa7.29□□□□□ -1.24
TUBGCP3-202ENST00000375669 LCE2DQ5TA82 110 aaPredicted RBP7.28□□□□□ -1.24
TUBGCP3-202ENST00000375669 KRTAP10-10P60014 251 aa7.22□□□□□ -1.25
TUBGCP3-202ENST00000375669 MT1FP04733 61 aa7.19□□□□□ -1.26
TUBGCP3-202ENST00000375669 KRTAP8-1Q8IUC2 63 aa7.16□□□□□ -1.26
TUBGCP3-202ENST00000375669 MT1HP80294 61 aa7.15□□□□□ -1.26
TUBGCP3-202ENST00000375669 MT2AP02795 61 aa7.11□□□□□ -1.27
TUBGCP3-202ENST00000375669 KMT2DO14686 5537 aa7.04□□□□□ -1.28
TUBGCP3-202ENST00000375669 KRTAP9-8Q9BYQ0 159 aa7.02□□□□□ -1.29
TUBGCP3-202ENST00000375669 USH2AO75445 5202 aa7.02□□□□□ -1.29
TUBGCP3-202ENST00000375669 KRTAP10-5P60370 271 aa7.01□□□□□ -1.29
TUBGCP3-202ENST00000375669 MT1XP80297 61 aa6.98□□□□□ -1.29
TUBGCP3-202ENST00000375669 KRTAP12-3P60328 96 aa6.97□□□□□ -1.29
TUBGCP3-202ENST00000375669 KRTAP10-12P60413 245 aa6.96□□□□□ -1.29
TUBGCP3-202ENST00000375669 MT1BP07438 61 aa6.94□□□□□ -1.3
TUBGCP3-202ENST00000375669 KRTAP10-7P60409 375 aaPredicted RBP6.94□□□□□ -1.3
TUBGCP3-202ENST00000375669 KRTAP19-8Q3LI54 63 aa6.86□□□□□ -1.31
TUBGCP3-202ENST00000375669 KRTAP9-3Q9BYQ3 159 aa6.67□□□□□ -1.34
TUBGCP3-202ENST00000375669 KRTAP19-5Q3LI72 72 aa6.65□□□□□ -1.35
TUBGCP3-202ENST00000375669 LCE3CQ5T5A8 94 aa6.6□□□□□ -1.35
TUBGCP3-202ENST00000375669 KRTAP4-8A0A0G2JLE6 195 aa6.57□□□□□ -1.36
TUBGCP3-202ENST00000375669 KRTAP4-8Q9BYQ9 185 aa6.57□□□□□ -1.36
TUBGCP3-202ENST00000375669 KRTAP9-6A8MVA2 160 aa6.5□□□□□ -1.37
TUBGCP3-202ENST00000375669 LCE2BO14633 110 aa6.48□□□□□ -1.37
TUBGCP3-202ENST00000375669 KRTAP4-7Q9BYR0 210 aa6.48□□□□□ -1.37
TUBGCP3-202ENST00000375669 KRTAP2-3P0C7H8 128 aa6.41□□□□□ -1.38
TUBGCP3-202ENST00000375669 KRTAP2-4Q9BYR9 128 aa6.41□□□□□ -1.38
TUBGCP3-202ENST00000375669 KRTAP2-1Q9BYU5 128 aa6.41□□□□□ -1.38
TUBGCP3-202ENST00000375669 FSIP2Q5CZC0 6907 aa6.38□□□□□ -1.39
TUBGCP3-202ENST00000375669 KRTAP19-7Q3SYF9 63 aa6.22□□□□□ -1.41
TUBGCP3-202ENST00000375669 LCE2AQ5TA79 106 aaPredicted RBP6.14□□□□□ -1.43
TUBGCP3-202ENST00000375669 DSTQ03001 7570 aaKnown RBP6.11□□□□□ -1.43
TUBGCP3-202ENST00000375669 MT1LQ93083 61 aa6.03□□□□□ -1.44
TUBGCP3-202ENST00000375669 MUC12Q9UKN1 5478 aa6.03□□□□□ -1.44
TUBGCP3-202ENST00000375669 LOC100996750A0A140TA64 210 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms