RNA–Protein interactions for RNA: ENST00000374706.5

CCNY-204, Transcript of cyclin Y, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCNY, Length 3,940 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNY-204ENST00000374706 KIAA1109Q2LD37 5005 aa5.53□□□□□ -1.52
CCNY-204ENST00000374706 KRTAP4-5Q9BYR2 181 aa5.52□□□□□ -1.53
CCNY-204ENST00000374706 RYR3Q15413 4870 aa5.5□□□□□ -1.53
CCNY-204ENST00000374706 PKD1P98161 4303 aa5.5□□□□□ -1.53
CCNY-204ENST00000374706 C20orf166-AS1Q96NR2 134 aa5.5□□□□□ -1.53
CCNY-204ENST00000374706 MT1HL1P0DM35 61 aa5.47□□□□□ -1.53
CCNY-204ENST00000374706 P0C880 135 aa5.46□□□□□ -1.53
CCNY-204ENST00000374706 SEC61BP60468 96 aaKnown RBP5.46□□□□□ -1.53
CCNY-204ENST00000374706 KRTAP3-1Q9BYR8 98 aa5.45□□□□□ -1.54
CCNY-204ENST00000374706 COX6B2Q6YFQ2 88 aa5.45□□□□□ -1.54
CCNY-204ENST00000374706 VPS13BQ7Z7G8 4022 aa5.45□□□□□ -1.54
CCNY-204ENST00000374706 APOBP04114 4563 aaKnown RBP5.44□□□□□ -1.54
CCNY-204ENST00000374706 RYR1P21817 5038 aa5.44□□□□□ -1.54
CCNY-204ENST00000374706 KRTAP17-1Q9BYP8 105 aa5.42□□□□□ -1.54
CCNY-204ENST00000374706 A0A0D9SG42 100 aa5.41□□□□□ -1.54
CCNY-204ENST00000374706 RPL37P61927 97 aaKnown RBP5.38□□□□□ -1.55
CCNY-204ENST00000374706 TPRXLQ17RH7 258 aa5.38□□□□□ -1.55
CCNY-204ENST00000374706 XP32Q5T750 250 aa5.38□□□□□ -1.55
CCNY-204ENST00000374706 EPPK1P58107 5090 aaKnown RBP5.35□□□□□ -1.55
CCNY-204ENST00000374706 HSPG2P98160 4391 aa5.33□□□□□ -1.56
CCNY-204ENST00000374706 BIRC6Q9NR09 4857 aa5.3□□□□□ -1.56
CCNY-204ENST00000374706 C10orf95Q9H7T3 257 aa5.29□□□□□ -1.56
CCNY-204ENST00000374706 LRP1Q07954 4544 aaKnown RBP5.27□□□□□ -1.57
CCNY-204ENST00000374706 KRTAP13-4Q3LI77 160 aa5.27□□□□□ -1.57
CCNY-204ENST00000374706 KRTAP10-6P60371 365 aaPredicted RBP5.25□□□□□ -1.57
CCNY-204ENST00000374706 S4R3F8 94 aa5.22□□□□□ -1.57
CCNY-204ENST00000374706 MYCBP2O75592 4640 aa5.21□□□□□ -1.57
CCNY-204ENST00000374706 HERC2O95714 4834 aa5.21□□□□□ -1.58
CCNY-204ENST00000374706 KRTAP3-3Q9BYR6 98 aa5.19□□□□□ -1.58
CCNY-204ENST00000374706 KRTAP3-2Q9BYR7 98 aa5.17□□□□□ -1.58
CCNY-204ENST00000374706 KRTAP15-1Q3LI76 137 aa5.15□□□□□ -1.59
CCNY-204ENST00000374706 KRTAP12-2P59991 146 aa5.15□□□□□ -1.59
CCNY-204ENST00000374706 ABCA13Q86UQ4 5058 aa5.12□□□□□ -1.59
CCNY-204ENST00000374706 FAT3Q8TDW7 4589 aa5.1□□□□□ -1.59
CCNY-204ENST00000374706 KRTAP12-1P59990 96 aa5.07□□□□□ -1.6
CCNY-204ENST00000374706 PKHD1L1Q86WI1 4243 aa5.05□□□□□ -1.6
CCNY-204ENST00000374706 M0R2T5 61 aa5.05□□□□□ -1.6
CCNY-204ENST00000374706 TNXBP22105 4242 aa5.03□□□□□ -1.6
CCNY-204ENST00000374706 CAMK2N1Q7Z7J9 78 aa5.01□□□□□ -1.61
CCNY-204ENST00000374706 M0QZ58 72 aa5□□□□□ -1.61
CCNY-204ENST00000374706 PCLOQ9Y6V0 5065 aa4.94□□□□□ -1.62
CCNY-204ENST00000374706 LRP2P98164 4655 aa4.91□□□□□ -1.62
CCNY-204ENST00000374706 KRTAP4-1Q9BYQ7 146 aa4.9□□□□□ -1.62
CCNY-204ENST00000374706 R4GN34 69 aa4.9□□□□□ -1.62
CCNY-204ENST00000374706 PLAC4Q8WY50 150 aa4.89□□□□□ -1.63
CCNY-204ENST00000374706 HERC1Q15751 4861 aa4.83□□□□□ -1.64
CCNY-204ENST00000374706 LPAP08519 4548 aa4.83□□□□□ -1.64
CCNY-204ENST00000374706 HMCN2Q8NDA2 5059 aa4.73□□□□□ -1.65
CCNY-204ENST00000374706 LORP23490 312 aaPredicted RBP4.69□□□□□ -1.66
CCNY-204ENST00000374706 KRTAP10-10P60014 251 aa4.69□□□□□ -1.66
CCNY-204ENST00000374706 PP632Q6XCG6 107 aa4.68□□□□□ -1.66
CCNY-204ENST00000374706 MT1HP80294 61 aa4.63□□□□□ -1.67
CCNY-204ENST00000374706 UBR4Q5T4S7 5183 aa4.62□□□□□ -1.67
CCNY-204ENST00000374706 KRTAP19-2Q3LHN2 52 aa4.59□□□□□ -1.67
CCNY-204ENST00000374706 LCE2CQ5TA81 110 aa4.59□□□□□ -1.68
CCNY-204ENST00000374706 RNF213Q63HN8 5207 aa4.58□□□□□ -1.68
CCNY-204ENST00000374706 MUC2Q02817 5179 aa4.55□□□□□ -1.68
CCNY-204ENST00000374706 TNP1P09430 55 aa4.53□□□□□ -1.69
CCNY-204ENST00000374706 MUC17Q685J3 4493 aa4.51□□□□□ -1.69
CCNY-204ENST00000374706 PRO2289Q9P1D8 64 aa4.51□□□□□ -1.69
CCNY-204ENST00000374706 MT2AP02795 61 aa4.47□□□□□ -1.69
CCNY-204ENST00000374706 FAT4Q6V0I7 4981 aa4.45□□□□□ -1.7
CCNY-204ENST00000374706 FLGP20930 4061 aaPredicted RBP4.45□□□□□ -1.7
CCNY-204ENST00000374706 MT1FP04733 61 aa4.42□□□□□ -1.7
CCNY-204ENST00000374706 LCE2DQ5TA82 110 aaPredicted RBP4.41□□□□□ -1.7
CCNY-204ENST00000374706 KRTAP9-8Q9BYQ0 159 aa4.38□□□□□ -1.71
CCNY-204ENST00000374706 KRTAP23-1A1A580 65 aa4.37□□□□□ -1.71
CCNY-204ENST00000374706 SPRR5A0A1B0GTR4 108 aa4.36□□□□□ -1.71
CCNY-204ENST00000374706 SPRR2GQ9BYE4 73 aa4.34□□□□□ -1.71
CCNY-204ENST00000374706 LCE2AQ5TA79 106 aaPredicted RBP4.34□□□□□ -1.72
CCNY-204ENST00000374706 KRTAP19-1Q8IUB9 90 aa4.29□□□□□ -1.72
CCNY-204ENST00000374706 KRTAP9-3Q9BYQ3 159 aa4.23□□□□□ -1.73
CCNY-204ENST00000374706 INE1O15225 51 aa4.22□□□□□ -1.73
CCNY-204ENST00000374706 LCE3AQ5TA76 89 aa4.21□□□□□ -1.73
CCNY-204ENST00000374706 KRTAP19-8Q3LI54 63 aa4.2□□□□□ -1.74
CCNY-204ENST00000374706 MT1BP07438 61 aa4.14□□□□□ -1.75
CCNY-204ENST00000374706 LCE2BO14633 110 aa4.12□□□□□ -1.75
CCNY-204ENST00000374706 FSIP2Q5CZC0 6907 aa4.04□□□□□ -1.76
CCNY-204ENST00000374706 KRTAP8-1Q8IUC2 63 aa4.03□□□□□ -1.76
CCNY-204ENST00000374706 MT1XP80297 61 aa4.02□□□□□ -1.77
CCNY-204ENST00000374706 KRTAP10-12P60413 245 aa4.01□□□□□ -1.77
CCNY-204ENST00000374706 KRTAP12-3P60328 96 aa4□□□□□ -1.77
CCNY-204ENST00000374706 KRTAP10-5P60370 271 aa3.99□□□□□ -1.77
CCNY-204ENST00000374706 KRTAP9-2Q9BYQ4 174 aa3.95□□□□□ -1.78
CCNY-204ENST00000374706 KRTAP10-7P60409 375 aaPredicted RBP3.89□□□□□ -1.79
CCNY-204ENST00000374706 KRTAP19-6Q3LI70 58 aa3.89□□□□□ -1.79
CCNY-204ENST00000374706 USH2AO75445 5202 aa3.89□□□□□ -1.79
CCNY-204ENST00000374706 CRCT1Q9UGL9 99 aa3.86□□□□□ -1.79
CCNY-204ENST00000374706 KRTAP4-8A0A0G2JLE6 195 aa3.77□□□□□ -1.81
CCNY-204ENST00000374706 KRTAP4-8Q9BYQ9 185 aa3.77□□□□□ -1.81
CCNY-204ENST00000374706 LCE3CQ5T5A8 94 aa3.75□□□□□ -1.81
CCNY-204ENST00000374706 KRTAP19-5Q3LI72 72 aa3.74□□□□□ -1.81
CCNY-204ENST00000374706 SSPOA2VEC9 5147 aa3.73□□□□□ -1.81
CCNY-204ENST00000374706 SPRR2FQ96RM1 72 aa3.69□□□□□ -1.82
CCNY-204ENST00000374706 KRTAP9-6A0A140TA67 174 aa3.68□□□□□ -1.82
CCNY-204ENST00000374706 FCGBPQ9Y6R7 5405 aaPredicted RBP3.65□□□□□ -1.82
CCNY-204ENST00000374706 KRTAP9-6A8MVA2 160 aa3.6□□□□□ -1.83
CCNY-204ENST00000374706 KMT2DO14686 5537 aa3.56□□□□□ -1.84
CCNY-204ENST00000374706 KRTAP19-7Q3SYF9 63 aa3.55□□□□□ -1.84
CCNY-204ENST00000374706 MT1EP04732 61 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms