RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 KRTAP10-4P60372 401 aaPredicted RBP9.28□□□□□ -0.92
LDLRAP1-201ENST00000374338 HSPG2P98160 4391 aa9.25□□□□□ -0.93
LDLRAP1-201ENST00000374338 C20orf166-AS1Q96NR2 134 aa9.24□□□□□ -0.93
LDLRAP1-201ENST00000374338 KIAA1109Q2LD37 5005 aa9.22□□□□□ -0.93
LDLRAP1-201ENST00000374338 TPRXLQ17RH7 258 aa9.22□□□□□ -0.93
LDLRAP1-201ENST00000374338 KRTAP3-1Q9BYR8 98 aa9.22□□□□□ -0.93
LDLRAP1-201ENST00000374338 FAT3Q8TDW7 4589 aa9.19□□□□□ -0.94
LDLRAP1-201ENST00000374338 KRTAP15-1Q3LI76 137 aa9.19□□□□□ -0.94
LDLRAP1-201ENST00000374338 COX6B2Q6YFQ2 88 aa9.18□□□□□ -0.94
LDLRAP1-201ENST00000374338 KRTAP21-3Q3LHN1 58 aa9.18□□□□□ -0.94
LDLRAP1-201ENST00000374338 TNXBP22105 4242 aa9.15□□□□□ -0.94
LDLRAP1-201ENST00000374338 KRTAP17-1Q9BYP8 105 aa9.15□□□□□ -0.95
LDLRAP1-201ENST00000374338 A0A0A0MQY5 61 aa9.12□□□□□ -0.95
LDLRAP1-201ENST00000374338 C10orf95Q9H7T3 257 aa9.09□□□□□ -0.95
LDLRAP1-201ENST00000374338 LPAP08519 4548 aa9.08□□□□□ -0.96
LDLRAP1-201ENST00000374338 A0A0D9SG42 100 aa9.06□□□□□ -0.96
LDLRAP1-201ENST00000374338 RPL37P61927 97 aaKnown RBP9.06□□□□□ -0.96
LDLRAP1-201ENST00000374338 Q5VSD8 79 aa9.06□□□□□ -0.96
LDLRAP1-201ENST00000374338 EPPK1P58107 5090 aaKnown RBP9.06□□□□□ -0.96
LDLRAP1-201ENST00000374338 RYR1P21817 5038 aa9.04□□□□□ -0.96
LDLRAP1-201ENST00000374338 RPS29P62273 56 aaKnown RBP9.04□□□□□ -0.96
LDLRAP1-201ENST00000374338 KRTAP13-4Q3LI77 160 aa8.95□□□□□ -0.98
LDLRAP1-201ENST00000374338 LRP2P98164 4655 aa8.95□□□□□ -0.98
LDLRAP1-201ENST00000374338 ABCA13Q86UQ4 5058 aa8.93□□□□□ -0.98
LDLRAP1-201ENST00000374338 KRTAP10-6P60371 365 aaPredicted RBP8.89□□□□□ -0.99
LDLRAP1-201ENST00000374338 KRTAP10-8P60410 259 aa8.88□□□□□ -0.99
LDLRAP1-201ENST00000374338 XP32Q5T750 250 aa8.81□□□□□ -1
LDLRAP1-201ENST00000374338 KRTAP3-2Q9BYR7 98 aa8.76□□□□□ -1.01
LDLRAP1-201ENST00000374338 S4R3F8 94 aa8.76□□□□□ -1.01
LDLRAP1-201ENST00000374338 KRTAP3-3Q9BYR6 98 aa8.74□□□□□ -1.01
LDLRAP1-201ENST00000374338 MT1HL1P0DM35 61 aa8.73□□□□□ -1.01
LDLRAP1-201ENST00000374338 KRTAP4-5Q9BYR2 181 aa8.72□□□□□ -1.01
LDLRAP1-201ENST00000374338 KRTAP12-2P59991 146 aa8.7□□□□□ -1.02
LDLRAP1-201ENST00000374338 LUZP6Q538Z0 58 aa8.69□□□□□ -1.02
LDLRAP1-201ENST00000374338 MUC2Q02817 5179 aa8.59□□□□□ -1.03
LDLRAP1-201ENST00000374338 KRTAP12-1P59990 96 aa8.57□□□□□ -1.04
LDLRAP1-201ENST00000374338 HERC2O95714 4834 aa8.47□□□□□ -1.05
LDLRAP1-201ENST00000374338 PLAC4Q8WY50 150 aa8.4□□□□□ -1.06
LDLRAP1-201ENST00000374338 HERC1Q15751 4861 aa8.3□□□□□ -1.08
LDLRAP1-201ENST00000374338 MUC17Q685J3 4493 aa8.28□□□□□ -1.08
LDLRAP1-201ENST00000374338 J3QL48 77 aa8.26□□□□□ -1.09
LDLRAP1-201ENST00000374338 KRTAP4-1Q9BYQ7 146 aa8.26□□□□□ -1.09
LDLRAP1-201ENST00000374338 M0QZ58 72 aa8.25□□□□□ -1.09
LDLRAP1-201ENST00000374338 PCLOQ9Y6V0 5065 aa8.17□□□□□ -1.1
LDLRAP1-201ENST00000374338 LORP23490 312 aaPredicted RBP8.14□□□□□ -1.11
LDLRAP1-201ENST00000374338 FAT4Q6V0I7 4981 aa8.13□□□□□ -1.11
LDLRAP1-201ENST00000374338 RNF213Q63HN8 5207 aa8.06□□□□□ -1.12
LDLRAP1-201ENST00000374338 SEC61BP60468 96 aaKnown RBP8.05□□□□□ -1.12
LDLRAP1-201ENST00000374338 R4GN34 69 aa8.03□□□□□ -1.12
LDLRAP1-201ENST00000374338 BIRC6Q9NR09 4857 aa8.01□□□□□ -1.13
LDLRAP1-201ENST00000374338 HMCN2Q8NDA2 5059 aa7.88□□□□□ -1.15
LDLRAP1-201ENST00000374338 PP632Q6XCG6 107 aa7.88□□□□□ -1.15
LDLRAP1-201ENST00000374338 UBR4Q5T4S7 5183 aa7.88□□□□□ -1.15
LDLRAP1-201ENST00000374338 KRTAP19-2Q3LHN2 52 aa7.87□□□□□ -1.15
LDLRAP1-201ENST00000374338 FLGP20930 4061 aaPredicted RBP7.81□□□□□ -1.16
LDLRAP1-201ENST00000374338 CAMK2N1Q7Z7J9 78 aa7.72□□□□□ -1.17
LDLRAP1-201ENST00000374338 SPRR5A0A1B0GTR4 108 aa7.68□□□□□ -1.18
LDLRAP1-201ENST00000374338 PRO2289Q9P1D8 64 aa7.62□□□□□ -1.19
LDLRAP1-201ENST00000374338 M0R2T5 61 aa7.55□□□□□ -1.2
LDLRAP1-201ENST00000374338 LCE2CQ5TA81 110 aa7.51□□□□□ -1.21
LDLRAP1-201ENST00000374338 KRTAP23-1A1A580 65 aa7.41□□□□□ -1.22
LDLRAP1-201ENST00000374338 TNP1P09430 55 aa7.41□□□□□ -1.22
LDLRAP1-201ENST00000374338 INE1O15225 51 aa7.34□□□□□ -1.24
LDLRAP1-201ENST00000374338 MT1HP80294 61 aa7.33□□□□□ -1.24
LDLRAP1-201ENST00000374338 KRTAP10-10P60014 251 aa7.28□□□□□ -1.24
LDLRAP1-201ENST00000374338 KRTAP19-1Q8IUB9 90 aa7.28□□□□□ -1.24
LDLRAP1-201ENST00000374338 MT1FP04733 61 aa7.25□□□□□ -1.25
LDLRAP1-201ENST00000374338 USH2AO75445 5202 aa7.2□□□□□ -1.26
LDLRAP1-201ENST00000374338 MT2AP02795 61 aa7.19□□□□□ -1.26
LDLRAP1-201ENST00000374338 FSIP2Q5CZC0 6907 aa7.15□□□□□ -1.27
LDLRAP1-201ENST00000374338 SPRR2GQ9BYE4 73 aa7.14□□□□□ -1.27
LDLRAP1-201ENST00000374338 KRTAP9-8Q9BYQ0 159 aa7.13□□□□□ -1.27
LDLRAP1-201ENST00000374338 LCE3AQ5TA76 89 aa7.06□□□□□ -1.28
LDLRAP1-201ENST00000374338 KMT2DO14686 5537 aa7.01□□□□□ -1.29
LDLRAP1-201ENST00000374338 MT1BP07438 61 aa6.9□□□□□ -1.3
LDLRAP1-201ENST00000374338 KRTAP10-5P60370 271 aa6.84□□□□□ -1.31
LDLRAP1-201ENST00000374338 MT1XP80297 61 aa6.83□□□□□ -1.32
LDLRAP1-201ENST00000374338 KRTAP9-3Q9BYQ3 159 aa6.8□□□□□ -1.32
LDLRAP1-201ENST00000374338 KRTAP19-8Q3LI54 63 aa6.79□□□□□ -1.32
LDLRAP1-201ENST00000374338 KRTAP10-7P60409 375 aaPredicted RBP6.78□□□□□ -1.32
LDLRAP1-201ENST00000374338 KRTAP8-1Q8IUC2 63 aa6.75□□□□□ -1.33
LDLRAP1-201ENST00000374338 LCE2BO14633 110 aa6.68□□□□□ -1.34
LDLRAP1-201ENST00000374338 KRTAP10-12P60413 245 aa6.65□□□□□ -1.34
LDLRAP1-201ENST00000374338 KRTAP12-3P60328 96 aa6.61□□□□□ -1.35
LDLRAP1-201ENST00000374338 KRTAP4-8A0A0G2JLE6 195 aa6.53□□□□□ -1.36
LDLRAP1-201ENST00000374338 KRTAP4-8Q9BYQ9 185 aa6.53□□□□□ -1.36
LDLRAP1-201ENST00000374338 LCE2AQ5TA79 106 aaPredicted RBP6.45□□□□□ -1.38
LDLRAP1-201ENST00000374338 KRTAP19-5Q3LI72 72 aa6.43□□□□□ -1.38
LDLRAP1-201ENST00000374338 SSPOA2VEC9 5147 aa6.39□□□□□ -1.39
LDLRAP1-201ENST00000374338 KRTAP4-7Q9BYR0 210 aa6.26□□□□□ -1.41
LDLRAP1-201ENST00000374338 KRTAP9-6A8MVA2 160 aa6.23□□□□□ -1.41
LDLRAP1-201ENST00000374338 LCE3CQ5T5A8 94 aa6.23□□□□□ -1.41
LDLRAP1-201ENST00000374338 DSTQ03001 7570 aaKnown RBP6.22□□□□□ -1.41
LDLRAP1-201ENST00000374338 MUC12Q9UKN1 5478 aa6.17□□□□□ -1.42
LDLRAP1-201ENST00000374338 FCGBPQ9Y6R7 5405 aaPredicted RBP6.15□□□□□ -1.42
LDLRAP1-201ENST00000374338 KRTAP2-3P0C7H8 128 aa6.14□□□□□ -1.43
LDLRAP1-201ENST00000374338 KRTAP2-4Q9BYR9 128 aa6.14□□□□□ -1.43
LDLRAP1-201ENST00000374338 KRTAP2-1Q9BYU5 128 aa6.14□□□□□ -1.43
LDLRAP1-201ENST00000374338 KRTAP19-7Q3SYF9 63 aa6.09□□□□□ -1.43
LDLRAP1-201ENST00000374338 KRTAP4-3Q9BYR4 195 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms