RNA–Protein interactions for RNA: ENST00000373672.7

COL16A1-203, Transcript of collagen type XVI alpha 1 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL16A1, Length 5,736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-203ENST00000373672 KRTAP4-1Q9BYQ7 146 aa7.18□□□□□ -1.26
COL16A1-203ENST00000373672 SPENQ96T58 3664 aaKnown RBP7.17□□□□□ -1.26
COL16A1-203ENST00000373672 MT1HP80294 61 aa7.17□□□□□ -1.26
COL16A1-203ENST00000373672 DNAH9Q9NYC9 4486 aa7.17□□□□□ -1.26
COL16A1-203ENST00000373672 DNAH5Q8TE73 4624 aa7.16□□□□□ -1.26
COL16A1-203ENST00000373672 DNAH10Q8IVF4 4471 aa7.13□□□□□ -1.27
COL16A1-203ENST00000373672 MUC3AQ02505 3323 aa7.12□□□□□ -1.27
COL16A1-203ENST00000373672 SPRR2GQ9BYE4 73 aa7.08□□□□□ -1.28
COL16A1-203ENST00000373672 MT2AP02795 61 aa7.08□□□□□ -1.28
COL16A1-203ENST00000373672 DNAH1Q9P2D7 4330 aa7.07□□□□□ -1.28
COL16A1-203ENST00000373672 DNAH11Q96DT5 4516 aa7.05□□□□□ -1.28
COL16A1-203ENST00000373672 BSNQ9UPA5 3926 aa7.04□□□□□ -1.28
COL16A1-203ENST00000373672 VPS13CQ709C8 3753 aa6.97□□□□□ -1.29
COL16A1-203ENST00000373672 PLECQ15149 4684 aaKnown RBP6.95□□□□□ -1.3
COL16A1-203ENST00000373672 DNAH17Q9UFH2 4485 aa6.92□□□□□ -1.3
COL16A1-203ENST00000373672 KRTAP19-5Q3LI72 72 aa6.91□□□□□ -1.3
COL16A1-203ENST00000373672 MT1FP04733 61 aa6.91□□□□□ -1.3
COL16A1-203ENST00000373672 KRTAP10-7P60409 375 aaPredicted RBP6.86□□□□□ -1.31
COL16A1-203ENST00000373672 LCE3CQ5T5A8 94 aa6.85□□□□□ -1.31
COL16A1-203ENST00000373672 AKAP9Q99996 3911 aa6.85□□□□□ -1.31
COL16A1-203ENST00000373672 VPS13DQ5THJ4 4388 aa6.84□□□□□ -1.32
COL16A1-203ENST00000373672 SPRR2FQ96RM1 72 aa6.83□□□□□ -1.32
COL16A1-203ENST00000373672 CSMD3Q7Z407 3707 aa6.81□□□□□ -1.32
COL16A1-203ENST00000373672 DYNC1H1Q14204 4646 aaKnown RBP6.76□□□□□ -1.33
COL16A1-203ENST00000373672 KRTAP19-4Q3LI73 84 aa6.76□□□□□ -1.33
COL16A1-203ENST00000373672 SACSQ9NZJ4 4579 aa6.73□□□□□ -1.33
COL16A1-203ENST00000373672 FAT1Q14517 4588 aa6.72□□□□□ -1.33
COL16A1-203ENST00000373672 DNAH3Q8TD57 4116 aa6.71□□□□□ -1.34
COL16A1-203ENST00000373672 DNAH8Q96JB1 4490 aa6.68□□□□□ -1.34
COL16A1-203ENST00000373672 LRP1BQ9NZR2 4599 aa6.68□□□□□ -1.34
COL16A1-203ENST00000373672 FAT2Q9NYQ8 4349 aa6.67□□□□□ -1.34
COL16A1-203ENST00000373672 DYNC2H1Q8NCM8 4307 aaKnown RBP6.65□□□□□ -1.34
COL16A1-203ENST00000373672 KRTAP19-8Q3LI54 63 aa6.54□□□□□ -1.36
COL16A1-203ENST00000373672 STARD9Q9P2P6 4700 aa6.5□□□□□ -1.37
COL16A1-203ENST00000373672 RYR1P21817 5038 aa6.48□□□□□ -1.37
COL16A1-203ENST00000373672 APOBP04114 4563 aaKnown RBP6.48□□□□□ -1.37
COL16A1-203ENST00000373672 ZNF469Q96JG9 3925 aaPredicted RBP6.46□□□□□ -1.37
COL16A1-203ENST00000373672 KRTAP19-1Q8IUB9 90 aa6.46□□□□□ -1.38
COL16A1-203ENST00000373672 DNHD1Q96M86 4753 aa6.44□□□□□ -1.38
COL16A1-203ENST00000373672 SPRR2EP22531 72 aa6.42□□□□□ -1.38
COL16A1-203ENST00000373672 SPRR2BP35325 72 aa6.42□□□□□ -1.38
COL16A1-203ENST00000373672 SPRR2AP35326 72 aa6.42□□□□□ -1.38
COL16A1-203ENST00000373672 ANK2Q01484 3957 aa6.4□□□□□ -1.38
COL16A1-203ENST00000373672 MT1XP80297 61 aa6.38□□□□□ -1.39
COL16A1-203ENST00000373672 LCE3BQ5TA77 95 aa6.35□□□□□ -1.39
COL16A1-203ENST00000373672 CMYA5Q8N3K9 4069 aa6.33□□□□□ -1.4
COL16A1-203ENST00000373672 DNAH6Q9C0G6 4158 aa6.32□□□□□ -1.4
COL16A1-203ENST00000373672 PRKDCP78527 4128 aaKnown RBP6.32□□□□□ -1.4
COL16A1-203ENST00000373672 LRP1Q07954 4544 aaKnown RBP6.31□□□□□ -1.4
COL16A1-203ENST00000373672 DNAH7Q8WXX0 4024 aa6.3□□□□□ -1.4
COL16A1-203ENST00000373672 FAT3Q8TDW7 4589 aa6.28□□□□□ -1.4
COL16A1-203ENST00000373672 MT1GP13640 62 aa6.28□□□□□ -1.4
COL16A1-203ENST00000373672 RYR3Q15413 4870 aa6.28□□□□□ -1.4
COL16A1-203ENST00000373672 MT1BP07438 61 aa6.27□□□□□ -1.41
COL16A1-203ENST00000373672 VPS13BQ7Z7G8 4022 aa6.27□□□□□ -1.41
COL16A1-203ENST00000373672 HERC1Q15751 4861 aa6.25□□□□□ -1.41
COL16A1-203ENST00000373672 KRTAP12-4P60329 112 aa6.22□□□□□ -1.41
COL16A1-203ENST00000373672 SPRR2DP22532 72 aa6.22□□□□□ -1.41
COL16A1-203ENST00000373672 KRTAP17-1Q9BYP8 105 aa6.2□□□□□ -1.42
COL16A1-203ENST00000373672 LCE2BO14633 110 aa6.19□□□□□ -1.42
COL16A1-203ENST00000373672 KRTAP9-8Q9BYQ0 159 aa6.18□□□□□ -1.42
COL16A1-203ENST00000373672 KMT2AQ03164 3969 aa6.16□□□□□ -1.42
COL16A1-203ENST00000373672 SPRR5A0A1B0GTR4 108 aa6.15□□□□□ -1.42
COL16A1-203ENST00000373672 HSPG2P98160 4391 aa6.12□□□□□ -1.43
COL16A1-203ENST00000373672 KRTAP4-8A0A0G2JLE6 195 aa6.1□□□□□ -1.43
COL16A1-203ENST00000373672 KRTAP4-8Q9BYQ9 185 aa6.1□□□□□ -1.43
COL16A1-203ENST00000373672 RYR2Q92736 4967 aa6.08□□□□□ -1.44
COL16A1-203ENST00000373672 KRTAP9-3Q9BYQ3 159 aa6.07□□□□□ -1.44
COL16A1-203ENST00000373672 LCE3DQ9BYE3 92 aa6.04□□□□□ -1.44
COL16A1-203ENST00000373672 LCE2CQ5TA81 110 aa6□□□□□ -1.45
COL16A1-203ENST00000373672 FRAS1Q86XX4 4008 aa5.99□□□□□ -1.45
COL16A1-203ENST00000373672 MYCBP2O75592 4640 aa5.99□□□□□ -1.45
COL16A1-203ENST00000373672 LYSTQ99698 3801 aa5.96□□□□□ -1.46
COL16A1-203ENST00000373672 LCE3EQ5T5B0 92 aa5.95□□□□□ -1.46
COL16A1-203ENST00000373672 KRTAP19-3Q7Z4W3 81 aa5.9□□□□□ -1.47
COL16A1-203ENST00000373672 HECTD4Q9Y4D8 3996 aa5.89□□□□□ -1.47
COL16A1-203ENST00000373672 PKD1P98161 4303 aa5.89□□□□□ -1.47
COL16A1-203ENST00000373672 KIAA1109Q2LD37 5005 aa5.84□□□□□ -1.47
COL16A1-203ENST00000373672 MT1LQ93083 61 aa5.83□□□□□ -1.48
COL16A1-203ENST00000373672 PKHD1L1Q86WI1 4243 aa5.83□□□□□ -1.48
COL16A1-203ENST00000373672 MT1EP04732 61 aa5.77□□□□□ -1.48
COL16A1-203ENST00000373672 KRTAP4-7Q9BYR0 210 aa5.77□□□□□ -1.49
COL16A1-203ENST00000373672 LCE2DQ5TA82 110 aaPredicted RBP5.67□□□□□ -1.5
COL16A1-203ENST00000373672 KRTAP19-2Q3LHN2 52 aa5.65□□□□□ -1.5
COL16A1-203ENST00000373672 BIRC6Q9NR09 4857 aa5.64□□□□□ -1.51
COL16A1-203ENST00000373672 HERC2O95714 4834 aa5.62□□□□□ -1.51
COL16A1-203ENST00000373672 MT1MQ8N339 61 aa5.61□□□□□ -1.51
COL16A1-203ENST00000373672 MT3P25713 68 aa5.59□□□□□ -1.51
COL16A1-203ENST00000373672 PCLOQ9Y6V0 5065 aa5.58□□□□□ -1.52
COL16A1-203ENST00000373672 LRP2P98164 4655 aa5.55□□□□□ -1.52
COL16A1-203ENST00000373672 LPAP08519 4548 aa5.52□□□□□ -1.53
COL16A1-203ENST00000373672 KRTAP19-6Q3LI70 58 aa5.5□□□□□ -1.53
COL16A1-203ENST00000373672 PRM1P04553 51 aa5.5□□□□□ -1.53
COL16A1-203ENST00000373672 HYDINQ4G0P3 5121 aa5.47□□□□□ -1.53
COL16A1-203ENST00000373672 LOC100996750A0A140TA64 210 aa5.46□□□□□ -1.53
COL16A1-203ENST00000373672 MT4P47944 62 aa5.46□□□□□ -1.53
COL16A1-203ENST00000373672 MUC17Q685J3 4493 aa5.45□□□□□ -1.54
COL16A1-203ENST00000373672 TNXBP22105 4242 aa5.45□□□□□ -1.54
COL16A1-203ENST00000373672 FLGP20930 4061 aaPredicted RBP5.44□□□□□ -1.54
COL16A1-203ENST00000373672 KMT2CQ8NEZ4 4911 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms