RNA–Protein interactions for RNA: ENST00000373063.7

FOXP4-204, Transcript of forkhead box P4, humanhuman

TSL 1 (best) BASIC

Gene FOXP4, Length 5,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4-204ENST00000373063 DNAH9Q9NYC9 4486 aa9.4□□□□□ -0.9
FOXP4-204ENST00000373063 KRTAP23-1A1A580 65 aa9.38□□□□□ -0.91
FOXP4-204ENST00000373063 MT1HP80294 61 aa9.33□□□□□ -0.92
FOXP4-204ENST00000373063 DNAH1Q9P2D7 4330 aa9.27□□□□□ -0.93
FOXP4-204ENST00000373063 KRTAP4-1Q9BYQ7 146 aa9.26□□□□□ -0.93
FOXP4-204ENST00000373063 DNAH5Q8TE73 4624 aa9.24□□□□□ -0.93
FOXP4-204ENST00000373063 KRTAP10-5P60370 271 aa9.18□□□□□ -0.94
FOXP4-204ENST00000373063 VPS13CQ709C8 3753 aa9.16□□□□□ -0.94
FOXP4-204ENST00000373063 MT2AP02795 61 aa9.1□□□□□ -0.95
FOXP4-204ENST00000373063 DNAH11Q96DT5 4516 aa9.07□□□□□ -0.96
FOXP4-204ENST00000373063 AKAP9Q99996 3911 aa9.04□□□□□ -0.96
FOXP4-204ENST00000373063 DNAH10Q8IVF4 4471 aa9.03□□□□□ -0.96
FOXP4-204ENST00000373063 DNAH2Q9P225 4427 aa9.03□□□□□ -0.96
FOXP4-204ENST00000373063 PLECQ15149 4684 aaKnown RBP9□□□□□ -0.97
FOXP4-204ENST00000373063 SPRR2FQ96RM1 72 aa8.97□□□□□ -0.97
FOXP4-204ENST00000373063 MT1FP04733 61 aa8.89□□□□□ -0.99
FOXP4-204ENST00000373063 CSMD3Q7Z407 3707 aa8.89□□□□□ -0.99
FOXP4-204ENST00000373063 SPRR2GQ9BYE4 73 aa8.88□□□□□ -0.99
FOXP4-204ENST00000373063 KRTAP10-7P60409 375 aaPredicted RBP8.84□□□□□ -0.99
FOXP4-204ENST00000373063 DNAH17Q9UFH2 4485 aa8.81□□□□□ -1
FOXP4-204ENST00000373063 VPS13DQ5THJ4 4388 aa8.8□□□□□ -1
FOXP4-204ENST00000373063 DYNC1H1Q14204 4646 aaKnown RBP8.76□□□□□ -1.01
FOXP4-204ENST00000373063 FAT2Q9NYQ8 4349 aa8.76□□□□□ -1.01
FOXP4-204ENST00000373063 ZNF469Q96JG9 3925 aaPredicted RBP8.71□□□□□ -1.01
FOXP4-204ENST00000373063 LRP1BQ9NZR2 4599 aa8.71□□□□□ -1.02
FOXP4-204ENST00000373063 DNHD1Q96M86 4753 aa8.7□□□□□ -1.02
FOXP4-204ENST00000373063 KRTAP19-5Q3LI72 72 aa8.7□□□□□ -1.02
FOXP4-204ENST00000373063 DNAH3Q8TD57 4116 aa8.64□□□□□ -1.03
FOXP4-204ENST00000373063 DYNC2H1Q8NCM8 4307 aaKnown RBP8.61□□□□□ -1.03
FOXP4-204ENST00000373063 SACSQ9NZJ4 4579 aa8.55□□□□□ -1.04
FOXP4-204ENST00000373063 SPRR2EP22531 72 aa8.54□□□□□ -1.04
FOXP4-204ENST00000373063 SPRR2BP35325 72 aa8.54□□□□□ -1.04
FOXP4-204ENST00000373063 SPRR2AP35326 72 aa8.54□□□□□ -1.04
FOXP4-204ENST00000373063 STARD9Q9P2P6 4700 aa8.52□□□□□ -1.05
FOXP4-204ENST00000373063 RYR1P21817 5038 aa8.51□□□□□ -1.05
FOXP4-204ENST00000373063 FAT1Q14517 4588 aa8.5□□□□□ -1.05
FOXP4-204ENST00000373063 LCE3CQ5T5A8 94 aa8.45□□□□□ -1.06
FOXP4-204ENST00000373063 DNAH8Q96JB1 4490 aa8.32□□□□□ -1.08
FOXP4-204ENST00000373063 ANK2Q01484 3957 aa8.28□□□□□ -1.08
FOXP4-204ENST00000373063 PRKDCP78527 4128 aaKnown RBP8.28□□□□□ -1.08
FOXP4-204ENST00000373063 SPRR2DP22532 72 aa8.28□□□□□ -1.08
FOXP4-204ENST00000373063 KRTAP17-1Q9BYP8 105 aa8.26□□□□□ -1.09
FOXP4-204ENST00000373063 APOBP04114 4563 aaKnown RBP8.26□□□□□ -1.09
FOXP4-204ENST00000373063 DNAH6Q9C0G6 4158 aa8.25□□□□□ -1.09
FOXP4-204ENST00000373063 VPS13BQ7Z7G8 4022 aa8.25□□□□□ -1.09
FOXP4-204ENST00000373063 RYR3Q15413 4870 aa8.24□□□□□ -1.09
FOXP4-204ENST00000373063 KRTAP19-8Q3LI54 63 aa8.22□□□□□ -1.09
FOXP4-204ENST00000373063 DNAH7Q8WXX0 4024 aa8.22□□□□□ -1.09
FOXP4-204ENST00000373063 KRTAP19-4Q3LI73 84 aa8.21□□□□□ -1.1
FOXP4-204ENST00000373063 KMT2AQ03164 3969 aa8.18□□□□□ -1.1
FOXP4-204ENST00000373063 FAT3Q8TDW7 4589 aa8.16□□□□□ -1.1
FOXP4-204ENST00000373063 LCE2BO14633 110 aa8.14□□□□□ -1.11
FOXP4-204ENST00000373063 KRTAP19-1Q8IUB9 90 aa8.13□□□□□ -1.11
FOXP4-204ENST00000373063 MT1XP80297 61 aa8.04□□□□□ -1.12
FOXP4-204ENST00000373063 LCE3BQ5TA77 95 aa8.02□□□□□ -1.13
FOXP4-204ENST00000373063 HERC1Q15751 4861 aa7.98□□□□□ -1.13
FOXP4-204ENST00000373063 KRTAP9-8Q9BYQ0 159 aa7.97□□□□□ -1.13
FOXP4-204ENST00000373063 MT1GP13640 62 aa7.97□□□□□ -1.13
FOXP4-204ENST00000373063 MT1BP07438 61 aa7.96□□□□□ -1.13
FOXP4-204ENST00000373063 LRP1Q07954 4544 aaKnown RBP7.95□□□□□ -1.14
FOXP4-204ENST00000373063 CMYA5Q8N3K9 4069 aa7.95□□□□□ -1.14
FOXP4-204ENST00000373063 KRTAP12-4P60329 112 aa7.93□□□□□ -1.14
FOXP4-204ENST00000373063 LYSTQ99698 3801 aa7.89□□□□□ -1.15
FOXP4-204ENST00000373063 RYR2Q92736 4967 aa7.85□□□□□ -1.15
FOXP4-204ENST00000373063 KRTAP9-3Q9BYQ3 159 aa7.84□□□□□ -1.15
FOXP4-204ENST00000373063 KRTAP4-8A0A0G2JLE6 195 aa7.84□□□□□ -1.16
FOXP4-204ENST00000373063 KRTAP4-8Q9BYQ9 185 aa7.84□□□□□ -1.16
FOXP4-204ENST00000373063 PKHD1L1Q86WI1 4243 aa7.78□□□□□ -1.16
FOXP4-204ENST00000373063 FRAS1Q86XX4 4008 aa7.77□□□□□ -1.17
FOXP4-204ENST00000373063 LCE2CQ5TA81 110 aa7.77□□□□□ -1.17
FOXP4-204ENST00000373063 HSPG2P98160 4391 aa7.73□□□□□ -1.17
FOXP4-204ENST00000373063 BIRC6Q9NR09 4857 aa7.69□□□□□ -1.18
FOXP4-204ENST00000373063 KIAA1109Q2LD37 5005 aa7.67□□□□□ -1.18
FOXP4-204ENST00000373063 MYCBP2O75592 4640 aa7.63□□□□□ -1.19
FOXP4-204ENST00000373063 PKD1P98161 4303 aa7.61□□□□□ -1.19
FOXP4-204ENST00000373063 HECTD4Q9Y4D8 3996 aa7.59□□□□□ -1.2
FOXP4-204ENST00000373063 LCE2DQ5TA82 110 aaPredicted RBP7.54□□□□□ -1.2
FOXP4-204ENST00000373063 KRTAP19-3Q7Z4W3 81 aa7.52□□□□□ -1.21
FOXP4-204ENST00000373063 HERC2O95714 4834 aa7.51□□□□□ -1.21
FOXP4-204ENST00000373063 KRTAP9-2Q9BYQ4 174 aa7.46□□□□□ -1.22
FOXP4-204ENST00000373063 LCE3DQ9BYE3 92 aa7.44□□□□□ -1.22
FOXP4-204ENST00000373063 PCLOQ9Y6V0 5065 aa7.38□□□□□ -1.23
FOXP4-204ENST00000373063 LPAP08519 4548 aa7.35□□□□□ -1.23
FOXP4-204ENST00000373063 MT4P47944 62 aa7.33□□□□□ -1.24
FOXP4-204ENST00000373063 MT1LQ93083 61 aa7.32□□□□□ -1.24
FOXP4-204ENST00000373063 HYDINQ4G0P3 5121 aa7.29□□□□□ -1.24
FOXP4-204ENST00000373063 MT1EP04732 61 aa7.29□□□□□ -1.24
FOXP4-204ENST00000373063 KRTAP4-7Q9BYR0 210 aa7.29□□□□□ -1.24
FOXP4-204ENST00000373063 LCE3EQ5T5B0 92 aa7.28□□□□□ -1.24
FOXP4-204ENST00000373063 PKHD1P08F94 4074 aa7.25□□□□□ -1.25
FOXP4-204ENST00000373063 KRTAP19-2Q3LHN2 52 aa7.24□□□□□ -1.25
FOXP4-204ENST00000373063 KRTAP19-6Q3LI70 58 aa7.22□□□□□ -1.25
FOXP4-204ENST00000373063 LRP2P98164 4655 aa7.2□□□□□ -1.26
FOXP4-204ENST00000373063 KRTAP9-6A0A140TA67 174 aa7.15□□□□□ -1.26
FOXP4-204ENST00000373063 MT1MQ8N339 61 aa7.12□□□□□ -1.27
FOXP4-204ENST00000373063 TNXBP22105 4242 aa7.11□□□□□ -1.27
FOXP4-204ENST00000373063 MUC17Q685J3 4493 aa7.1□□□□□ -1.27
FOXP4-204ENST00000373063 SPRR5A0A1B0GTR4 108 aa7.07□□□□□ -1.28
FOXP4-204ENST00000373063 MT3P25713 68 aa7.06□□□□□ -1.28
FOXP4-204ENST00000373063 LOC100996750A0A140TA64 210 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms