RNA–Protein interactions for RNA: ENST00000372925.6

MACF1-205, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 14,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-205ENST00000372925 DNAH6Q9C0G6 4158 aa2.7□□□□□ -1.98
MACF1-205ENST00000372925 CSMD3Q7Z407 3707 aa2.7□□□□□ -1.98
MACF1-205ENST00000372925 DNAH3Q8TD57 4116 aa2.69□□□□□ -1.98
MACF1-205ENST00000372925 DNAH7Q8WXX0 4024 aa2.68□□□□□ -1.98
MACF1-205ENST00000372925 KRTAP10-12P60413 245 aa2.67□□□□□ -1.98
MACF1-205ENST00000372925 ANK2Q01484 3957 aa2.66□□□□□ -1.98
MACF1-205ENST00000372925 VPS13DQ5THJ4 4388 aa2.65□□□□□ -1.98
MACF1-205ENST00000372925 DNAH17Q9UFH2 4485 aa2.65□□□□□ -1.99
MACF1-205ENST00000372925 LYSTQ99698 3801 aa2.65□□□□□ -1.99
MACF1-205ENST00000372925 HECTD4Q9Y4D8 3996 aa2.63□□□□□ -1.99
MACF1-205ENST00000372925 KRTAP10-5P60370 271 aa2.62□□□□□ -1.99
MACF1-205ENST00000372925 DNAH8Q96JB1 4490 aa2.62□□□□□ -1.99
MACF1-205ENST00000372925 CSMD2Q7Z408 3487 aa2.61□□□□□ -1.99
MACF1-205ENST00000372925 ZNF469Q96JG9 3925 aaPredicted RBP2.6□□□□□ -1.99
MACF1-205ENST00000372925 VPS13BQ7Z7G8 4022 aa2.59□□□□□ -1.99
MACF1-205ENST00000372925 DNAH9Q9NYC9 4486 aa2.59□□□□□ -1.99
MACF1-205ENST00000372925 KRTAP3-2Q9BYR7 98 aa2.59□□□□□ -2
MACF1-205ENST00000372925 SACSQ9NZJ4 4579 aa2.59□□□□□ -2
MACF1-205ENST00000372925 KRTAP12-3P60328 96 aa2.58□□□□□ -2
MACF1-205ENST00000372925 APOBP04114 4563 aaKnown RBP2.58□□□□□ -2
MACF1-205ENST00000372925 DNAH5Q8TE73 4624 aa2.58□□□□□ -2
MACF1-205ENST00000372925 KRTAP3-3Q9BYR6 98 aa2.58□□□□□ -2
MACF1-205ENST00000372925 MT1HL1P0DM35 61 aa2.54□□□□□ -2
MACF1-205ENST00000372925 KMT2AQ03164 3969 aa2.53□□□□□ -2
MACF1-205ENST00000372925 KRTAP10-7P60409 375 aaPredicted RBP2.53□□□□□ -2.01
MACF1-205ENST00000372925 KRTAP19-4Q3LI73 84 aa2.52□□□□□ -2.01
MACF1-205ENST00000372925 DYNC1H1Q14204 4646 aaKnown RBP2.52□□□□□ -2.01
MACF1-205ENST00000372925 BIRC6Q9NR09 4857 aa2.51□□□□□ -2.01
MACF1-205ENST00000372925 FAT3Q8TDW7 4589 aa2.5□□□□□ -2.01
MACF1-205ENST00000372925 PRKDCP78527 4128 aaKnown RBP2.48□□□□□ -2.01
MACF1-205ENST00000372925 PKHD1L1Q86WI1 4243 aa2.47□□□□□ -2.01
MACF1-205ENST00000372925 KRTAP10-4P60372 401 aaPredicted RBP2.47□□□□□ -2.01
MACF1-205ENST00000372925 DYNC2H1Q8NCM8 4307 aaKnown RBP2.47□□□□□ -2.01
MACF1-205ENST00000372925 MYCBP2O75592 4640 aa2.46□□□□□ -2.02
MACF1-205ENST00000372925 LCE3AQ5TA76 89 aa2.46□□□□□ -2.02
MACF1-205ENST00000372925 FAT2Q9NYQ8 4349 aa2.44□□□□□ -2.02
MACF1-205ENST00000372925 PKD1P98161 4303 aa2.44□□□□□ -2.02
MACF1-205ENST00000372925 KRTAP8-1Q8IUC2 63 aa2.43□□□□□ -2.02
MACF1-205ENST00000372925 DNHD1Q96M86 4753 aa2.42□□□□□ -2.02
MACF1-205ENST00000372925 FLGP20930 4061 aaPredicted RBP2.42□□□□□ -2.02
MACF1-205ENST00000372925 LRP1BQ9NZR2 4599 aa2.42□□□□□ -2.02
MACF1-205ENST00000372925 LORP23490 312 aaPredicted RBP2.4□□□□□ -2.03
MACF1-205ENST00000372925 LRP1Q07954 4544 aaKnown RBP2.37□□□□□ -2.03
MACF1-205ENST00000372925 SPRR2GQ9BYE4 73 aa2.36□□□□□ -2.03
MACF1-205ENST00000372925 FAT1Q14517 4588 aa2.35□□□□□ -2.03
MACF1-205ENST00000372925 RYR2Q92736 4967 aa2.3□□□□□ -2.04
MACF1-205ENST00000372925 PKHD1P08F94 4074 aa2.28□□□□□ -2.04
MACF1-205ENST00000372925 HSPG2P98160 4391 aa2.27□□□□□ -2.05
MACF1-205ENST00000372925 LCE3CQ5T5A8 94 aa2.27□□□□□ -2.05
MACF1-205ENST00000372925 KRTAP4-5Q9BYR2 181 aa2.27□□□□□ -2.05
MACF1-205ENST00000372925 RYR3Q15413 4870 aa2.25□□□□□ -2.05
MACF1-205ENST00000372925 STARD9Q9P2P6 4700 aa2.24□□□□□ -2.05
MACF1-205ENST00000372925 MT1HP80294 61 aa2.24□□□□□ -2.05
MACF1-205ENST00000372925 TNXBP22105 4242 aa2.24□□□□□ -2.05
MACF1-205ENST00000372925 RYR1P21817 5038 aa2.23□□□□□ -2.05
MACF1-205ENST00000372925 SPRR2FQ96RM1 72 aa2.21□□□□□ -2.06
MACF1-205ENST00000372925 KRTAP19-5Q3LI72 72 aa2.19□□□□□ -2.06
MACF1-205ENST00000372925 MT2AP02795 61 aa2.19□□□□□ -2.06
MACF1-205ENST00000372925 HERC1Q15751 4861 aa2.18□□□□□ -2.06
MACF1-205ENST00000372925 HERC2O95714 4834 aa2.17□□□□□ -2.06
MACF1-205ENST00000372925 LRP2P98164 4655 aa2.16□□□□□ -2.06
MACF1-205ENST00000372925 LCE3BQ5TA77 95 aa2.14□□□□□ -2.07
MACF1-205ENST00000372925 KRTAP19-8Q3LI54 63 aa2.13□□□□□ -2.07
MACF1-205ENST00000372925 KRTAP4-1Q9BYQ7 146 aa2.13□□□□□ -2.07
MACF1-205ENST00000372925 SPRR5A0A1B0GTR4 108 aa2.12□□□□□ -2.07
MACF1-205ENST00000372925 MT1FP04733 61 aa2.11□□□□□ -2.07
MACF1-205ENST00000372925 SPRR2EP22531 72 aa2.11□□□□□ -2.07
MACF1-205ENST00000372925 SPRR2BP35325 72 aa2.11□□□□□ -2.07
MACF1-205ENST00000372925 SPRR2AP35326 72 aa2.11□□□□□ -2.07
MACF1-205ENST00000372925 KRTAP12-4P60329 112 aa2.11□□□□□ -2.07
MACF1-205ENST00000372925 MT3P25713 68 aa2.06□□□□□ -2.08
MACF1-205ENST00000372925 MT1GP13640 62 aa2.05□□□□□ -2.08
MACF1-205ENST00000372925 SPRR2DP22532 72 aa2.05□□□□□ -2.08
MACF1-205ENST00000372925 PCLOQ9Y6V0 5065 aa2.04□□□□□ -2.08
MACF1-205ENST00000372925 KRTAP19-1Q8IUB9 90 aa2.03□□□□□ -2.08
MACF1-205ENST00000372925 LCE2BO14633 110 aa2.03□□□□□ -2.08
MACF1-205ENST00000372925 LCE3DQ9BYE3 92 aa2.03□□□□□ -2.09
MACF1-205ENST00000372925 HMCN2Q8NDA2 5059 aa2.02□□□□□ -2.09
MACF1-205ENST00000372925 MT1XP80297 61 aa2.02□□□□□ -2.09
MACF1-205ENST00000372925 HYDINQ4G0P3 5121 aa2.01□□□□□ -2.09
MACF1-205ENST00000372925 LCE3EQ5T5B0 92 aa2□□□□□ -2.09
MACF1-205ENST00000372925 EPPK1P58107 5090 aaKnown RBP1.99□□□□□ -2.09
MACF1-205ENST00000372925 MT1LQ93083 61 aa1.97□□□□□ -2.09
MACF1-205ENST00000372925 MUC17Q685J3 4493 aa1.96□□□□□ -2.1
MACF1-205ENST00000372925 LCE2CQ5TA81 110 aa1.95□□□□□ -2.1
MACF1-205ENST00000372925 KRTAP9-8Q9BYQ0 159 aa1.94□□□□□ -2.1
MACF1-205ENST00000372925 ABCA13Q86UQ4 5058 aa1.94□□□□□ -2.1
MACF1-205ENST00000372925 KIAA1109Q2LD37 5005 aa1.94□□□□□ -2.1
MACF1-205ENST00000372925 MT1BP07438 61 aa1.93□□□□□ -2.1
MACF1-205ENST00000372925 KRTAP19-3Q7Z4W3 81 aa1.92□□□□□ -2.1
MACF1-205ENST00000372925 LCE2DQ5TA82 110 aaPredicted RBP1.91□□□□□ -2.1
MACF1-205ENST00000372925 KRTAP9-3Q9BYQ3 159 aa1.9□□□□□ -2.11
MACF1-205ENST00000372925 RNF213Q63HN8 5207 aa1.89□□□□□ -2.11
MACF1-205ENST00000372925 KMT2CQ8NEZ4 4911 aaKnown RBP1.89□□□□□ -2.11
MACF1-205ENST00000372925 MT1EP04732 61 aa1.89□□□□□ -2.11
MACF1-205ENST00000372925 UBR4Q5T4S7 5183 aa1.89□□□□□ -2.11
MACF1-205ENST00000372925 PRM1P04553 51 aa1.88□□□□□ -2.11
MACF1-205ENST00000372925 LCE1BQ5T7P3 118 aa1.87□□□□□ -2.11
MACF1-205ENST00000372925 MT4P47944 62 aa1.83□□□□□ -2.12
MACF1-205ENST00000372925 LCE1DQ5T752 114 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms