RNA–Protein interactions for RNA: ENST00000371335.4

LAMP2-202, Transcript of lysosomal associated membrane protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMP2, Length 4,030 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP2-202ENST00000371335 H0YAA0 97 aa4.58□□□□□ -1.68
LAMP2-202ENST00000371335 P0C880 135 aa4.57□□□□□ -1.68
LAMP2-202ENST00000371335 COX6B2Q6YFQ2 88 aa4.56□□□□□ -1.68
LAMP2-202ENST00000371335 KMT2CQ8NEZ4 4911 aaKnown RBP4.56□□□□□ -1.68
LAMP2-202ENST00000371335 FAT1Q14517 4588 aa4.55□□□□□ -1.68
LAMP2-202ENST00000371335 CAMK2N1Q7Z7J9 78 aa4.54□□□□□ -1.68
LAMP2-202ENST00000371335 RYR3Q15413 4870 aa4.49□□□□□ -1.69
LAMP2-202ENST00000371335 R4GN34 69 aa4.45□□□□□ -1.7
LAMP2-202ENST00000371335 S4R3F8 94 aa4.45□□□□□ -1.7
LAMP2-202ENST00000371335 LRP1Q07954 4544 aaKnown RBP4.44□□□□□ -1.7
LAMP2-202ENST00000371335 KRTAP13-2Q52LG2 175 aa4.44□□□□□ -1.7
LAMP2-202ENST00000371335 SEC61BP60468 96 aaKnown RBP4.43□□□□□ -1.7
LAMP2-202ENST00000371335 FLGP20930 4061 aaPredicted RBP4.43□□□□□ -1.7
LAMP2-202ENST00000371335 M0QZ58 72 aa4.43□□□□□ -1.7
LAMP2-202ENST00000371335 PLAC4Q8WY50 150 aa4.41□□□□□ -1.7
LAMP2-202ENST00000371335 TPRXLQ17RH7 258 aa4.4□□□□□ -1.71
LAMP2-202ENST00000371335 KRTAP10-2P60368 255 aa4.39□□□□□ -1.71
LAMP2-202ENST00000371335 KRTAP10-8P60410 259 aa4.39□□□□□ -1.71
LAMP2-202ENST00000371335 KRTAP1-4P0C5Y4 121 aa4.33□□□□□ -1.72
LAMP2-202ENST00000371335 KRTAP10-4P60372 401 aaPredicted RBP4.32□□□□□ -1.72
LAMP2-202ENST00000371335 KRTAP21-3Q3LHN1 58 aa4.32□□□□□ -1.72
LAMP2-202ENST00000371335 KRTAP3-1Q9BYR8 98 aa4.32□□□□□ -1.72
LAMP2-202ENST00000371335 RYR1P21817 5038 aa4.29□□□□□ -1.72
LAMP2-202ENST00000371335 KRTAP10-1P60331 282 aa4.28□□□□□ -1.72
LAMP2-202ENST00000371335 MUC17Q685J3 4493 aa4.28□□□□□ -1.73
LAMP2-202ENST00000371335 ABCA13Q86UQ4 5058 aa4.27□□□□□ -1.73
LAMP2-202ENST00000371335 EPPK1P58107 5090 aaKnown RBP4.24□□□□□ -1.73
LAMP2-202ENST00000371335 KRTAP17-1Q9BYP8 105 aa4.24□□□□□ -1.73
LAMP2-202ENST00000371335 A0A1B0GVY2 172 aa4.24□□□□□ -1.73
LAMP2-202ENST00000371335 LRP2P98164 4655 aa4.22□□□□□ -1.73
LAMP2-202ENST00000371335 KRTAP15-1Q3LI76 137 aa4.21□□□□□ -1.74
LAMP2-202ENST00000371335 KRTAP12-2P59991 146 aa4.19□□□□□ -1.74
LAMP2-202ENST00000371335 KRTAP13-4Q3LI77 160 aa4.18□□□□□ -1.74
LAMP2-202ENST00000371335 HERC1Q15751 4861 aa4.16□□□□□ -1.74
LAMP2-202ENST00000371335 MUC2Q02817 5179 aa4.13□□□□□ -1.75
LAMP2-202ENST00000371335 KRTAP3-3Q9BYR6 98 aa4.11□□□□□ -1.75
LAMP2-202ENST00000371335 KRTAP10-6P60371 365 aaPredicted RBP4.1□□□□□ -1.75
LAMP2-202ENST00000371335 PCLOQ9Y6V0 5065 aa4.09□□□□□ -1.76
LAMP2-202ENST00000371335 KIAA1109Q2LD37 5005 aa4.06□□□□□ -1.76
LAMP2-202ENST00000371335 KRTAP12-1P59990 96 aa4.06□□□□□ -1.76
LAMP2-202ENST00000371335 KRTAP3-2Q9BYR7 98 aa4.06□□□□□ -1.76
LAMP2-202ENST00000371335 TNP1P09430 55 aa4.05□□□□□ -1.76
LAMP2-202ENST00000371335 RPS29P62273 56 aaKnown RBP4.04□□□□□ -1.76
LAMP2-202ENST00000371335 BIRC6Q9NR09 4857 aa4.02□□□□□ -1.77
LAMP2-202ENST00000371335 M0R2T5 61 aa4.01□□□□□ -1.77
LAMP2-202ENST00000371335 PP632Q6XCG6 107 aa4□□□□□ -1.77
LAMP2-202ENST00000371335 HERC2O95714 4834 aa3.95□□□□□ -1.78
LAMP2-202ENST00000371335 XP32Q5T750 250 aa3.94□□□□□ -1.78
LAMP2-202ENST00000371335 LCE2DQ5TA82 110 aaPredicted RBP3.91□□□□□ -1.78
LAMP2-202ENST00000371335 MT1HL1P0DM35 61 aa3.9□□□□□ -1.78
LAMP2-202ENST00000371335 Q5VSD8 79 aa3.89□□□□□ -1.79
LAMP2-202ENST00000371335 FAT4Q6V0I7 4981 aa3.85□□□□□ -1.79
LAMP2-202ENST00000371335 PRO2289Q9P1D8 64 aa3.83□□□□□ -1.8
LAMP2-202ENST00000371335 KRTAP19-2Q3LHN2 52 aa3.83□□□□□ -1.8
LAMP2-202ENST00000371335 LORP23490 312 aaPredicted RBP3.82□□□□□ -1.8
LAMP2-202ENST00000371335 HMCN2Q8NDA2 5059 aa3.79□□□□□ -1.8
LAMP2-202ENST00000371335 UBR4Q5T4S7 5183 aa3.75□□□□□ -1.81
LAMP2-202ENST00000371335 KRTAP4-5Q9BYR2 181 aa3.75□□□□□ -1.81
LAMP2-202ENST00000371335 RNF213Q63HN8 5207 aa3.69□□□□□ -1.82
LAMP2-202ENST00000371335 INE1O15225 51 aa3.68□□□□□ -1.82
LAMP2-202ENST00000371335 KRTAP4-1Q9BYQ7 146 aa3.67□□□□□ -1.82
LAMP2-202ENST00000371335 LCE2CQ5TA81 110 aa3.61□□□□□ -1.83
LAMP2-202ENST00000371335 LCE2BO14633 110 aa3.58□□□□□ -1.84
LAMP2-202ENST00000371335 KRTAP10-10P60014 251 aa3.53□□□□□ -1.84
LAMP2-202ENST00000371335 LCE2AQ5TA79 106 aaPredicted RBP3.5□□□□□ -1.85
LAMP2-202ENST00000371335 KMT2DO14686 5537 aa3.45□□□□□ -1.86
LAMP2-202ENST00000371335 LCE3AQ5TA76 89 aa3.43□□□□□ -1.86
LAMP2-202ENST00000371335 USH2AO75445 5202 aa3.43□□□□□ -1.86
LAMP2-202ENST00000371335 KRTAP23-1A1A580 65 aa3.39□□□□□ -1.87
LAMP2-202ENST00000371335 KRTAP12-3P60328 96 aa3.35□□□□□ -1.87
LAMP2-202ENST00000371335 SYNE1Q8NF91 8797 aaKnown RBP3.34□□□□□ -1.87
LAMP2-202ENST00000371335 CRCT1Q9UGL9 99 aa3.34□□□□□ -1.87
LAMP2-202ENST00000371335 SPRR5A0A1B0GTR4 108 aa3.32□□□□□ -1.88
LAMP2-202ENST00000371335 OBSCNQ5VST9 7968 aa3.3□□□□□ -1.88
LAMP2-202ENST00000371335 KRTAP10-12P60413 245 aa3.28□□□□□ -1.88
LAMP2-202ENST00000371335 KRTAP19-1Q8IUB9 90 aa3.28□□□□□ -1.88
LAMP2-202ENST00000371335 LOC100996750A0A140TA64 210 aa3.27□□□□□ -1.89
LAMP2-202ENST00000371335 KRTAP4-6Q9BYQ5 205 aa3.27□□□□□ -1.89
LAMP2-202ENST00000371335 KRTAP9-8Q9BYQ0 159 aa3.26□□□□□ -1.89
LAMP2-202ENST00000371335 MT1HP80294 61 aa3.24□□□□□ -1.89
LAMP2-202ENST00000371335 KRTAP10-5P60370 271 aa3.23□□□□□ -1.89
LAMP2-202ENST00000371335 SPRR2GQ9BYE4 73 aa3.23□□□□□ -1.89
LAMP2-202ENST00000371335 MT1FP04733 61 aa3.16□□□□□ -1.9
LAMP2-202ENST00000371335 MT2AP02795 61 aa3.15□□□□□ -1.91
LAMP2-202ENST00000371335 KRTAP19-8Q3LI54 63 aa3.14□□□□□ -1.91
LAMP2-202ENST00000371335 KRTAP9-3Q9BYQ3 159 aa3.11□□□□□ -1.91
LAMP2-202ENST00000371335 MT1BP07438 61 aa3.11□□□□□ -1.91
LAMP2-202ENST00000371335 FSIP2Q5CZC0 6907 aa3.1□□□□□ -1.91
LAMP2-202ENST00000371335 KRTAP10-7P60409 375 aaPredicted RBP3.09□□□□□ -1.91
LAMP2-202ENST00000371335 MT1XP80297 61 aa3.09□□□□□ -1.92
LAMP2-202ENST00000371335 SSPOA2VEC9 5147 aa3.04□□□□□ -1.92
LAMP2-202ENST00000371335 KRTAP8-1Q8IUC2 63 aa3.04□□□□□ -1.92
LAMP2-202ENST00000371335 KRTAP9-6A8MVA2 160 aa3□□□□□ -1.93
LAMP2-202ENST00000371335 KRTAP12-4P60329 112 aa2.98□□□□□ -1.93
LAMP2-202ENST00000371335 KRTAP19-5Q3LI72 72 aa2.96□□□□□ -1.94
LAMP2-202ENST00000371335 LCE3CQ5T5A8 94 aa2.96□□□□□ -1.94
LAMP2-202ENST00000371335 KRTAP4-7Q9BYR0 210 aa2.96□□□□□ -1.94
LAMP2-202ENST00000371335 DSTQ03001 7570 aaKnown RBP2.95□□□□□ -1.94
LAMP2-202ENST00000371335 KRTAP4-8A0A0G2JLE6 195 aa2.95□□□□□ -1.94
LAMP2-202ENST00000371335 KRTAP4-8Q9BYQ9 185 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms