RNA–Protein interactions for RNA: ENST00000371335.4

LAMP2-202, Transcript of lysosomal associated membrane protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMP2, Length 4,030 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP2-202ENST00000371335 NISCHQ9Y2I1 1504 aa16.87■□□□□ 0.29
LAMP2-202ENST00000371335 CCDC180Q9P1Z9 1646 aa14.81□□□□□ -0.04
LAMP2-202ENST00000371335 ZCCHC6Q5VYS8 1495 aaKnown RBP14.37□□□□□ -0.11
LAMP2-202ENST00000371335 DCAF1Q9Y4B6 1507 aa14.16□□□□□ -0.14
LAMP2-202ENST00000371335 MYO15BQ96JP2 1530 aa13.86□□□□□ -0.19
LAMP2-202ENST00000371335 SHROOM4Q9ULL8 1493 aa13.79□□□□□ -0.2
LAMP2-202ENST00000371335 ABCC9O60706 1549 aa13.59□□□□□ -0.23
LAMP2-202ENST00000371335 SUPT5HO00267 1087 aaKnown RBP13.58□□□□□ -0.24
LAMP2-202ENST00000371335 UNC13AQ9UPW8 1703 aa13.53□□□□□ -0.24
LAMP2-202ENST00000371335 PPARGC1BQ86YN6 1023 aaKnown RBP13.52□□□□□ -0.25
LAMP2-202ENST00000371335 PELP1Q8IZL8 1130 aaKnown RBP13.48□□□□□ -0.25
LAMP2-202ENST00000371335 NACADO15069 1562 aa13.42□□□□□ -0.26
LAMP2-202ENST00000371335 HRCP23327 699 aa13.42□□□□□ -0.26
LAMP2-202ENST00000371335 PCGF6Q9BYE7 350 aa13.34□□□□□ -0.27
LAMP2-202ENST00000371335 EIF4G1Q04637 1599 aaKnown RBP13.31□□□□□ -0.28
LAMP2-202ENST00000371335 SCRIBQ14160 1630 aa13.31□□□□□ -0.28
LAMP2-202ENST00000371335 CHIC1Q5VXU3 224 aa13.28□□□□□ -0.28
LAMP2-202ENST00000371335 MYT1Q01538 1121 aa13.19□□□□□ -0.3
LAMP2-202ENST00000371335 LOC105371045A0A1W2PR82 267 aa13.16□□□□□ -0.3
LAMP2-202ENST00000371335 BICRAQ9NZM4 1560 aa13.16□□□□□ -0.3
LAMP2-202ENST00000371335 RSF1Q96T23 1441 aaPredicted RBP13.13□□□□□ -0.31
LAMP2-202ENST00000371335 RB1CC1Q8TDY2 1594 aa13.12□□□□□ -0.31
LAMP2-202ENST00000371335 BAZ1AQ9NRL2 1556 aaPredicted RBP13.08□□□□□ -0.32
LAMP2-202ENST00000371335 MROH2BQ7Z745 1585 aa13.06□□□□□ -0.32
LAMP2-202ENST00000371335 WIZO95785 1651 aa13.05□□□□□ -0.32
LAMP2-202ENST00000371335 CECR2Q9BXF3 1484 aa13.03□□□□□ -0.32
LAMP2-202ENST00000371335 PEG3Q9GZU2 1588 aa13.03□□□□□ -0.32
LAMP2-202ENST00000371335 SMARCA4P51532 1647 aa12.98□□□□□ -0.33
LAMP2-202ENST00000371335 DCAF8L2P0C7V8 631 aa12.92□□□□□ -0.34
LAMP2-202ENST00000371335 TOP2AP11388 1531 aaKnown RBP12.86□□□□□ -0.35
LAMP2-202ENST00000371335 SMARCA2P51531 1590 aa12.84□□□□□ -0.35
LAMP2-202ENST00000371335 SCAF1Q9H7N4 1312 aaKnown RBP12.82□□□□□ -0.36
LAMP2-202ENST00000371335 EHMT2Q96KQ7 1210 aa12.74□□□□□ -0.37
LAMP2-202ENST00000371335 TRIM26Q12899 539 aaPredicted RBP12.71□□□□□ -0.38
LAMP2-202ENST00000371335 YTHDC1Q96MU7 727 aaKnown RBP12.7□□□□□ -0.38
LAMP2-202ENST00000371335 CENPBP07199 599 aaPredicted RBP12.7□□□□□ -0.38
LAMP2-202ENST00000371335 PRDM2Q13029 1718 aa12.63□□□□□ -0.39
LAMP2-202ENST00000371335 CCDC88BA6NC98 1476 aa12.62□□□□□ -0.39
LAMP2-202ENST00000371335 FAM9AQ8IZU1 332 aaPredicted RBP12.61□□□□□ -0.39
LAMP2-202ENST00000371335 ERICH6Q7L0X2 663 aa12.52□□□□□ -0.41
LAMP2-202ENST00000371335 HMGXB3Q12766 1538 aa12.51□□□□□ -0.41
LAMP2-202ENST00000371335 BIVM-ERCC5R4GMW8 1640 aa12.51□□□□□ -0.41
LAMP2-202ENST00000371335 ATAD2BQ9ULI0 1458 aa12.5□□□□□ -0.41
LAMP2-202ENST00000371335 ABCC8Q09428 1581 aa12.49□□□□□ -0.41
LAMP2-202ENST00000371335 NEUROD1Q13562 356 aa12.49□□□□□ -0.41
LAMP2-202ENST00000371335 GTF3C3Q9Y5Q9 886 aa12.48□□□□□ -0.41
LAMP2-202ENST00000371335 SYNJ1O43426 1573 aa12.47□□□□□ -0.41
LAMP2-202ENST00000371335 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.45□□□□□ -0.42
LAMP2-202ENST00000371335 TTBK1Q5TCY1 1321 aaPredicted RBP12.42□□□□□ -0.42
LAMP2-202ENST00000371335 TRIM41Q8WV44 630 aa12.39□□□□□ -0.43
LAMP2-202ENST00000371335 TOP2BQ02880 1626 aa12.38□□□□□ -0.43
LAMP2-202ENST00000371335 NCAPD3P42695 1498 aa12.35□□□□□ -0.43
LAMP2-202ENST00000371335 KIF21BO75037 1637 aa12.34□□□□□ -0.43
LAMP2-202ENST00000371335 ACIN1Q9UKV3 1341 aaKnown RBP12.32□□□□□ -0.44
LAMP2-202ENST00000371335 ZEB1P37275 1124 aaPredicted RBP12.32□□□□□ -0.44
LAMP2-202ENST00000371335 CCER1Q8TC90 406 aaPredicted RBP12.3□□□□□ -0.44
LAMP2-202ENST00000371335 RUSC2Q8N2Y8 1516 aa12.27□□□□□ -0.45
LAMP2-202ENST00000371335 BAZ1BQ9UIG0 1483 aaKnown RBP12.25□□□□□ -0.45
LAMP2-202ENST00000371335 WDR97A6NE52 1622 aa12.24□□□□□ -0.45
LAMP2-202ENST00000371335 WRNQ14191 1432 aaPredicted RBP eCLIP12.23□□□□□ -0.45
LAMP2-202ENST00000371335 CUX1P39880 1505 aa12.21□□□□□ -0.45
LAMP2-202ENST00000371335 SOGA1O94964 1423 aa12.2□□□□□ -0.46
LAMP2-202ENST00000371335 CFTRP13569 1480 aa12.2□□□□□ -0.46
LAMP2-202ENST00000371335 DIEXFQ68CQ4 756 aaKnown RBP12.18□□□□□ -0.46
LAMP2-202ENST00000371335 BCL11AQ9H165 835 aa12.18□□□□□ -0.46
LAMP2-202ENST00000371335 CC2D2AQ9P2K1 1620 aa12.16□□□□□ -0.46
LAMP2-202ENST00000371335 EEA1Q15075 1411 aa12.13□□□□□ -0.47
LAMP2-202ENST00000371335 PABPN1Q86U42 306 aaKnown RBP eCLIP12.12□□□□□ -0.47
LAMP2-202ENST00000371335 ERICH3Q5RHP9 1530 aa12.11□□□□□ -0.47
LAMP2-202ENST00000371335 BCANQ96GW7 911 aa12.09□□□□□ -0.47
LAMP2-202ENST00000371335 PRXQ9BXM0 1461 aa12.08□□□□□ -0.48
LAMP2-202ENST00000371335 MIER1Q8N108 512 aa12.04□□□□□ -0.48
LAMP2-202ENST00000371335 TNIKQ9UKE5 1360 aa12.04□□□□□ -0.48
LAMP2-202ENST00000371335 NEFLP07196 543 aa12.01□□□□□ -0.49
LAMP2-202ENST00000371335 EIF5BO60841 1220 aaKnown RBP12□□□□□ -0.49
LAMP2-202ENST00000371335 CEP162Q5TB80 1403 aa11.99□□□□□ -0.49
LAMP2-202ENST00000371335 LRRIQ1Q96JM4 1722 aa11.99□□□□□ -0.49
LAMP2-202ENST00000371335 GOLGA3Q08378 1498 aa11.98□□□□□ -0.49
LAMP2-202ENST00000371335 RAPGEF2Q9Y4G8 1499 aa11.97□□□□□ -0.49
LAMP2-202ENST00000371335 ABCA5Q8WWZ7 1642 aa11.96□□□□□ -0.49
LAMP2-202ENST00000371335 CEP164Q9UPV0 1460 aa11.95□□□□□ -0.5
LAMP2-202ENST00000371335 KIF21AQ7Z4S6 1674 aa11.95□□□□□ -0.5
LAMP2-202ENST00000371335 ARAP1Q96P48 1450 aa11.94□□□□□ -0.5
LAMP2-202ENST00000371335 DNMBPQ6XZF7 1577 aa11.92□□□□□ -0.5
LAMP2-202ENST00000371335 LAMC3Q9Y6N6 1575 aa11.91□□□□□ -0.5
LAMP2-202ENST00000371335 TARBP1Q13395 1621 aaKnown RBP11.91□□□□□ -0.5
LAMP2-202ENST00000371335 ZNF316A6NFI3 1004 aaPredicted RBP11.91□□□□□ -0.5
LAMP2-202ENST00000371335 CTTNBP2Q8WZ74 1663 aa11.9□□□□□ -0.5
LAMP2-202ENST00000371335 CFAP43Q8NDM7 1665 aa11.89□□□□□ -0.51
LAMP2-202ENST00000371335 HNRNPUL2Q1KMD3 747 aaKnown RBP11.88□□□□□ -0.51
LAMP2-202ENST00000371335 ABCA10Q8WWZ4 1543 aa11.84□□□□□ -0.51
LAMP2-202ENST00000371335 CUL7Q14999 1698 aa11.84□□□□□ -0.51
LAMP2-202ENST00000371335 CADPSQ9ULU8 1353 aa11.84□□□□□ -0.51
LAMP2-202ENST00000371335 URB2Q14146 1524 aaKnown RBP11.83□□□□□ -0.52
LAMP2-202ENST00000371335 ANP32EQ9BTT0 268 aa11.83□□□□□ -0.52
LAMP2-202ENST00000371335 SAMD9Q5K651 1589 aa11.82□□□□□ -0.52
LAMP2-202ENST00000371335 FGD5Q6ZNL6 1462 aa11.82□□□□□ -0.52
LAMP2-202ENST00000371335 PBRM1Q86U86 1689 aa11.81□□□□□ -0.52
LAMP2-202ENST00000371335 CLIP1P30622 1438 aa11.81□□□□□ -0.52
LAMP2-202ENST00000371335 TOPBP1Q92547 1522 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms