RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 MT1HL1P0DM35 61 aa15.07■□□□□ 0
SSBP3-204ENST00000371320 MYCBP2O75592 4640 aa14.98□□□□□ -0.01
SSBP3-204ENST00000371320 A0A1B0GU33 70 aa14.91□□□□□ -0.02
SSBP3-204ENST00000371320 H0YAA0 97 aa14.86□□□□□ -0.03
SSBP3-204ENST00000371320 H1FX-AS1Q4G0G2 97 aa14.86□□□□□ -0.03
SSBP3-204ENST00000371320 KRTAP4-5Q9BYR2 181 aa14.8□□□□□ -0.04
SSBP3-204ENST00000371320 KRTAP3-3Q9BYR6 98 aa14.76□□□□□ -0.05
SSBP3-204ENST00000371320 RBM12B-AS1Q9P1G2 102 aa14.74□□□□□ -0.05
SSBP3-204ENST00000371320 S4R3F8 94 aa14.71□□□□□ -0.05
SSBP3-204ENST00000371320 TPRXLQ17RH7 258 aa14.7□□□□□ -0.06
SSBP3-204ENST00000371320 ADM2Q7Z4H4 148 aa14.65□□□□□ -0.06
SSBP3-204ENST00000371320 PRAC1Q96KF2 57 aa14.64□□□□□ -0.07
SSBP3-204ENST00000371320 BIRC6Q9NR09 4857 aa14.56□□□□□ -0.08
SSBP3-204ENST00000371320 KRTAP10-6P60371 365 aaPredicted RBP14.54□□□□□ -0.08
SSBP3-204ENST00000371320 ABCA13Q86UQ4 5058 aa14.52□□□□□ -0.09
SSBP3-204ENST00000371320 LRP2P98164 4655 aa14.51□□□□□ -0.09
SSBP3-204ENST00000371320 KRTAP3-2Q9BYR7 98 aa14.48□□□□□ -0.09
SSBP3-204ENST00000371320 LPAP08519 4548 aa14.47□□□□□ -0.09
SSBP3-204ENST00000371320 HERC2O95714 4834 aa14.46□□□□□ -0.09
SSBP3-204ENST00000371320 K7ERS5 55 aa14.38□□□□□ -0.11
SSBP3-204ENST00000371320 KRTAP13-4Q3LI77 160 aa14.33□□□□□ -0.12
SSBP3-204ENST00000371320 P0C880 135 aa14.3□□□□□ -0.12
SSBP3-204ENST00000371320 CSAG1Q6PB30 78 aa14.29□□□□□ -0.12
SSBP3-204ENST00000371320 A0A0D9SG42 100 aa14.22□□□□□ -0.13
SSBP3-204ENST00000371320 J3QL48 77 aa14.18□□□□□ -0.14
SSBP3-204ENST00000371320 SEC61BP60468 96 aaKnown RBP14.17□□□□□ -0.14
SSBP3-204ENST00000371320 LINC01554Q52M75 96 aa14.06□□□□□ -0.16
SSBP3-204ENST00000371320 ROMO1P60602 79 aa13.97□□□□□ -0.17
SSBP3-204ENST00000371320 KRTAP25-1Q3LHN0 102 aa13.96□□□□□ -0.17
SSBP3-204ENST00000371320 MUC17Q685J3 4493 aa13.94□□□□□ -0.18
SSBP3-204ENST00000371320 KRTAP4-1Q9BYQ7 146 aa13.91□□□□□ -0.18
SSBP3-204ENST00000371320 M0QZ58 72 aa13.91□□□□□ -0.18
SSBP3-204ENST00000371320 PCLOQ9Y6V0 5065 aa13.86□□□□□ -0.19
SSBP3-204ENST00000371320 KRTAP12-2P59991 146 aa13.86□□□□□ -0.19
SSBP3-204ENST00000371320 CRIPTQ9P021 101 aa13.82□□□□□ -0.2
SSBP3-204ENST00000371320 KRTAP12-1P59990 96 aa13.79□□□□□ -0.2
SSBP3-204ENST00000371320 SPINT4Q6UDR6 99 aa13.78□□□□□ -0.2
SSBP3-204ENST00000371320 HERC1Q15751 4861 aa13.7□□□□□ -0.22
SSBP3-204ENST00000371320 KRTAP19-2Q3LHN2 52 aa13.63□□□□□ -0.23
SSBP3-204ENST00000371320 R4GN34 69 aa13.63□□□□□ -0.23
SSBP3-204ENST00000371320 HMCN2Q8NDA2 5059 aa13.52□□□□□ -0.24
SSBP3-204ENST00000371320 LORP23490 312 aaPredicted RBP13.48□□□□□ -0.25
SSBP3-204ENST00000371320 C10orf95Q9H7T3 257 aa13.4□□□□□ -0.26
SSBP3-204ENST00000371320 MUC2Q02817 5179 aa13.36□□□□□ -0.27
SSBP3-204ENST00000371320 FLGP20930 4061 aaPredicted RBP13.28□□□□□ -0.28
SSBP3-204ENST00000371320 LCE2CQ5TA81 110 aa12.94□□□□□ -0.34
SSBP3-204ENST00000371320 CAMK2N1Q7Z7J9 78 aa12.91□□□□□ -0.34
SSBP3-204ENST00000371320 UBR4Q5T4S7 5183 aa12.9□□□□□ -0.34
SSBP3-204ENST00000371320 RNF213Q63HN8 5207 aa12.82□□□□□ -0.36
SSBP3-204ENST00000371320 FAT4Q6V0I7 4981 aa12.75□□□□□ -0.37
SSBP3-204ENST00000371320 M0R2T5 61 aa12.68□□□□□ -0.38
SSBP3-204ENST00000371320 KRTAP15-1Q3LI76 137 aa12.63□□□□□ -0.39
SSBP3-204ENST00000371320 MT1HP80294 61 aa12.62□□□□□ -0.39
SSBP3-204ENST00000371320 SPRR2GQ9BYE4 73 aa12.54□□□□□ -0.4
SSBP3-204ENST00000371320 PP632Q6XCG6 107 aa12.5□□□□□ -0.41
SSBP3-204ENST00000371320 KRTAP19-1Q8IUB9 90 aa12.47□□□□□ -0.41
SSBP3-204ENST00000371320 PLAC4Q8WY50 150 aa12.4□□□□□ -0.42
SSBP3-204ENST00000371320 TNP1P09430 55 aa12.39□□□□□ -0.43
SSBP3-204ENST00000371320 MT2AP02795 61 aa12.36□□□□□ -0.43
SSBP3-204ENST00000371320 KRTAP10-10P60014 251 aa12.35□□□□□ -0.43
SSBP3-204ENST00000371320 MT1FP04733 61 aa12.33□□□□□ -0.44
SSBP3-204ENST00000371320 H3BS24 57 aa12.32□□□□□ -0.44
SSBP3-204ENST00000371320 KRTAP9-8Q9BYQ0 159 aa12.3□□□□□ -0.44
SSBP3-204ENST00000371320 KRTAP23-1A1A580 65 aa12.18□□□□□ -0.46
SSBP3-204ENST00000371320 NDUFAF8A1L188 74 aa12.17□□□□□ -0.46
SSBP3-204ENST00000371320 KRTAP19-8Q3LI54 63 aa12.03□□□□□ -0.48
SSBP3-204ENST00000371320 MT1BP07438 61 aa11.87□□□□□ -0.51
SSBP3-204ENST00000371320 KRTAP9-3Q9BYQ3 159 aa11.8□□□□□ -0.52
SSBP3-204ENST00000371320 LCE3AQ5TA76 89 aa11.74□□□□□ -0.53
SSBP3-204ENST00000371320 LCE2AQ5TA79 106 aaPredicted RBP11.74□□□□□ -0.53
SSBP3-204ENST00000371320 KRTAP10-5P60370 271 aa11.72□□□□□ -0.53
SSBP3-204ENST00000371320 MT1XP80297 61 aa11.71□□□□□ -0.53
SSBP3-204ENST00000371320 LUZP6Q538Z0 58 aa11.66□□□□□ -0.54
SSBP3-204ENST00000371320 SPRR5A0A1B0GTR4 108 aa11.49□□□□□ -0.57
SSBP3-204ENST00000371320 KRTAP8-1Q8IUC2 63 aa11.47□□□□□ -0.57
SSBP3-204ENST00000371320 KRTAP10-12P60413 245 aa11.42□□□□□ -0.58
SSBP3-204ENST00000371320 PRO2289Q9P1D8 64 aa11.4□□□□□ -0.58
SSBP3-204ENST00000371320 LCE2BO14633 110 aa11.35□□□□□ -0.59
SSBP3-204ENST00000371320 KRTAP10-7P60409 375 aaPredicted RBP11.35□□□□□ -0.59
SSBP3-204ENST00000371320 KRTAP12-3P60328 96 aa11.22□□□□□ -0.61
SSBP3-204ENST00000371320 USH2AO75445 5202 aa11.01□□□□□ -0.65
SSBP3-204ENST00000371320 KRTAP19-5Q3LI72 72 aa10.85□□□□□ -0.67
SSBP3-204ENST00000371320 A0A0A0MQY5 61 aa10.81□□□□□ -0.68
SSBP3-204ENST00000371320 KRTAP4-8A0A0G2JLE6 195 aa10.7□□□□□ -0.7
SSBP3-204ENST00000371320 KRTAP4-8Q9BYQ9 185 aa10.7□□□□□ -0.7
SSBP3-204ENST00000371320 KMT2DO14686 5537 aa10.68□□□□□ -0.7
SSBP3-204ENST00000371320 SSPOA2VEC9 5147 aa10.57□□□□□ -0.72
SSBP3-204ENST00000371320 LCE3CQ5T5A8 94 aa10.54□□□□□ -0.72
SSBP3-204ENST00000371320 LCE2DQ5TA82 110 aaPredicted RBP10.48□□□□□ -0.73
SSBP3-204ENST00000371320 FSIP2Q5CZC0 6907 aa10.45□□□□□ -0.74
SSBP3-204ENST00000371320 KRTAP19-7Q3SYF9 63 aa10.43□□□□□ -0.74
SSBP3-204ENST00000371320 KRTAP19-6Q3LI70 58 aa10.39□□□□□ -0.75
SSBP3-204ENST00000371320 MT1EP04732 61 aa10.18□□□□□ -0.78
SSBP3-204ENST00000371320 KRTAP19-4Q3LI73 84 aa10.14□□□□□ -0.79
SSBP3-204ENST00000371320 MT1LQ93083 61 aa10.13□□□□□ -0.79
SSBP3-204ENST00000371320 KRTAP9-6A8MVA2 160 aa10.09□□□□□ -0.79
SSBP3-204ENST00000371320 KRTAP4-7Q9BYR0 210 aa10.08□□□□□ -0.8
SSBP3-204ENST00000371320 FCGBPQ9Y6R7 5405 aaPredicted RBP10.02□□□□□ -0.81
SSBP3-204ENST00000371320 KRTAP9-2Q9BYQ4 174 aa10.02□□□□□ -0.81
SSBP3-204ENST00000371320 INE1O15225 51 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms